# Extract read count signals from bam files

## Documentation for package ‘bamsignals’ version 1.12.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

bamsignals-package | Efficient counting of reads in a bam file
alignSignals | Container for count signals
alignSignals-method | Container for count signals
as.list | Container for count signals
as.list-method | Container for count signals
as.list.CountSignals | Converts the container to a list 'l' such that 'l[[i]]' is the i-th signal.
bamCount | Functions for extracting count signals from a bam file.
bamCount-method | Functions for extracting count signals from a bam file.
bamCoverage | Functions for extracting count signals from a bam file.
bamCoverage-method | Functions for extracting count signals from a bam file.
bamProfile | Functions for extracting count signals from a bam file.
bamProfile-method | Functions for extracting count signals from a bam file.
bamsignals | Efficient counting of reads in a bam file
bamsignals-methods | Functions for extracting count signals from a bam file.
CountSignals | Container for count signals
CountSignals-class | Container for count signals
length | Container for count signals
length-method | Container for count signals
width | Container for count signals
width-method | Container for count signals
[-method | Container for count signals