Package: atSNP
Type: Package
Title: Affinity test for identifying regulatory SNPs
Version: 1.2.0
Date: 2019-10-6
Authors@R: c(person(given = "Chandler", family = "Zuo", role = "aut"),
        person(given = "Sunyoung",family = "Shin",role = c("aut", "cre"), email = "sunyoung.shin@utdallas.edu"),
        person(given = "Sunduz", family = "Keles", role = "aut"))
Description: atSNP performs affinity tests of motif matches with the SNP or the reference genomes and SNP-led changes in motif matches.
License: GPL-2
LinkingTo: Rcpp
Depends: R (>= 3.6)
Suggests: testthat, BiocStyle, knitr, rmarkdown
Imports: BSgenome, BiocFileCache, BiocParallel, Rcpp, data.table,
        ggplot2, grDevices, graphics, grid, motifStack, rappdirs,
        stats, testit, utils
RoxygenNote: 6.1.1
biocViews: Software, ChIPSeq, GenomeAnnotation, MotifAnnotation,
        Visualization
URL: https://github.com/sunyoungshin/atSNP
BugReports: https://github.com/sunyoungshin/atSNP/issues
VignetteBuilder: knitr
git_url: https://git.bioconductor.org/packages/atSNP
git_branch: RELEASE_3_10
git_last_commit: 4c978e2
git_last_commit_date: 2019-10-29
Date/Publication: 2019-10-29
NeedsCompilation: yes
Packaged: 2019-10-30 03:32:04 UTC; biocbuild
Author: Chandler Zuo [aut],
  Sunyoung Shin [aut, cre],
  Sunduz Keles [aut]
Maintainer: Sunyoung Shin <sunyoung.shin@utdallas.edu>
Built: R 3.6.1; x86_64-conda_cos6-linux-gnu; 2019-11-05 08:11:38 UTC; unix
