Package: atSNP
Type: Package
Title: Affinity test for identifying regulatory SNPs
Version: 1.0.0
Date: 2019-04-24
Authors@R: c(person(given = "Chandler", family = "Zuo", role = "aut"),
        person(given = "Sunyoung",family = "Shin",role = c("aut", "cre"), email = "sunyoung.shin@utdallas.edu"),
        person(given = "Sunduz", family = "Keles", role = "aut"))
Description: atSNP performs affinity tests of motif matches with the SNP or the reference genomes and SNP-led changes in motif matches.
License: GPL-2
LinkingTo: Rcpp
Depends: R (>= 3.6)
Suggests: testthat, BiocStyle, knitr, rmarkdown
Imports: Rcpp, data.table, BiocParallel, BiocFileCache, rappdirs,
        BSgenome, motifStack, grDevices, graphics, stats, utils, grid
RoxygenNote: 6.1.1
biocViews: Software, ChIPSeq, GenomeAnnotation, MotifAnnotation,
        Visualization
URL: https://github.com/sunyoungshin/atSNP
BugReports: https://github.com/sunyoungshin/atSNP/issues
VignetteBuilder: knitr
git_url: https://git.bioconductor.org/packages/atSNP
git_branch: RELEASE_3_9
git_last_commit: a54ff2e
git_last_commit_date: 2019-05-02
Date/Publication: 2019-05-02
NeedsCompilation: yes
Packaged: 2019-05-03 03:27:12 UTC; biocbuild
Author: Chandler Zuo [aut],
  Sunyoung Shin [aut, cre],
  Sunduz Keles [aut]
Maintainer: Sunyoung Shin <sunyoung.shin@utdallas.edu>
Built: R 3.6.1; x86_64-conda_cos6-linux-gnu; 2019-08-16 15:21:40 UTC; unix
