\name{@ANNOBJPREFIX@PATH}
\alias{@ANNOBJPREFIX@PATH}
\alias{@ANNOBJPREFIX@PATH2PROBE}
\title{Mappings between probe identifiers and KEGG pathway identifiers}
\description{
  KEGG (Kyoto Encyclopedia of Genes and Genomes) maintains pathway data
  for various organisms.

  @ANNOBJPREFIX@PATH maps probe identifiers to the identifiers used by
  KEGG for pathways in which the genes represented by the probe
  identifiers are involved

  @ANNOBJPREFIX@PATH2PROBE is an R object that provides mappings between
  KEGG identifiers and manufacturer identifiers.  
}
\details{
  Each KEGG pathway has a name and identifier. Pathway name for a given pathway
  identifier can be obtained using the KEGG data package that can either be
  built using AnnBuilder or downloaded from Bioconductor
  \url{http://www.bioconductor.org}.

  Graphic presentations of pathways are searchable at
  url http://www.genome.ad.jp/kegg/pathway.html by using pathway identifiers as
  keys.   

  Mappings were based on data provided by: @PATHSOURCE@

}
\references{
  \url{http://www.genome.ad.jp/kegg/}
}
\examples{
    x <- @ANNOBJPREFIX@PATH
    # Get the probe identifiers that are mapped to a KEGG pathway ID
    mapped_probes <- mappedkeys(x)
    # Convert to a list
    xx <- as.list(x[mapped_probes])
    if(length(xx) > 0) {
      # Get the PATH for the first five probes
      xx[1:5]
      # Get the first one
      xx[[1]]
    }

    # Now convert the @ANNOBJPREFIX@PATH2PROBE object to a list
    xx <- as.list(@ANNOBJPREFIX@PATH2PROBE)
    if(length(xx) > 0){
        # Get the probe identifiers for the first two pathway identifiers
        xx[1:2]
        # Get the first one
        xx[[1]]
    } 
}
\keyword{datasets}

