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<!--   File      : arb_seq_export.dtd                                     -->
<!--   Purpose   : DTD for ARB sequence export                            -->
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<!-- Coded by Ralf Westram (coder@reallysoft.de) in July 2002             -->
<!-- Copyright Department of Microbiology (Technical University Munich)   -->
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<!-- Visit our web site at: http://www.arb-home.de/                       -->
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<!--  Please note: This file is just a templete for you to create         -->
<!--               your own DTD according to your database contents       -->
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<!ELEMENT ARB_SEQ_EXPORT (SPECIES)* >
<!ATTLIST ARB_SEQ_EXPORT database CDATA #IMPLIED> <!--name of ARB database sequences were exported from-->
<!ATTLIST ARB_SEQ_EXPORT export_date CDATA #IMPLIED>

<!--1. elements with name attribute-->

<!ELEMENT SPECIES ANY >
<!ATTLIST SPECIES name ID #REQUIRED> <!--name should always be treated as ID because ARB does the same-->

<!ELEMENT ALIGNMENT (DATA,REMARK?) >
<!ATTLIST ALIGNMENT name CDATA #REQUIRED>

<!ELEMENT DATA (#PCDATA) > <!--the sequence data-->
<!ELEMENT REMARK (#PCDATA) > <!--sequence remarks-->

<!-- 2. simple text elements-->
<!-- 2.1 'Standard' elements-->

<!ELEMENT FULL_NAME (#PCDATA) >
<!ELEMENT ACC (#PCDATA) >
<!ELEMENT ARB_COLOR (#PCDATA) >

<!-- 2.2 Other common elements-->

<!ELEMENT BER_ID (#PCDATA) >
<!ELEMENT BER_DATE (#PCDATA) >
<!ELEMENT BER_DE (#PCDATA) >
<!ELEMENT BER_FULL_NAME (#PCDATA) >
<!ELEMENT BER_TAX (#PCDATA) >
<!ELEMENT BER_AUTHOR (#PCDATA) >
<!ELEMENT BER_TITLE (#PCDATA) >
<!ELEMENT BER_JOURNAL (#PCDATA) >
<!ELEMENT BER_AC (#PCDATA) >

