>NZ_ABKX01000004.1|c1|129480-130241|+|ZP_02902454.1|porin_thermoregulatory_protein_EnvY
----------------------------------MQLSSSEP------------------
---------------------CVVILTEKEVE----------VRINDHASFILPANYLAA
FACNNNTIEVSTV--------------------------------NNALIAHINRKVIHD
YLLF---LNKNLISVNPWPRLA-------------APVIACHSRTPEVFRLAASHSQQ-Q
DCKPCETELTRALLFTVLSNFLDQ--SRFIALLMYILRSSIRDSVYLIIQSDIQHYWSLR
IVASSLCLSPSLLKKKLKSE-NTTYSQIVTHCRMRYAAQLLLMDNRNIAQVAQLCGYSST
SYFISVFKAFYGMTPLNYLTEQRLQPI----Q----------------------------
--
>NZ_ACYJ01000001.1|c1|4737-5615|-|ZP_05726690.1|transcriptional_regulator,_AraC_family
----------------------------MNQSHKDALLQPGI-SHFLAGNLRLTRVYTTL
QQD---------------LRLSGTSAAHLSLVIMREG--SGHFSLQPGQLQAFQPGSLLL
SSSRFPCAGEDFFPRHYLYDLFIVNYPV-----------------GLCDA------LDCA
GLDSGGSQGQVWRAPLNATLEA-------------------LQQQIDVACRDQSAFGQ--
---LQLESLLLSLLWHGIAQVQQGEDCRAGGALLMGRDRQRLIRARDYMQQHACRELTLE
EVARAAGMSQLAFKRGFRAMFTITPWNFVIECRLQQAQLLLRQTMLTLDDIATRCGFSHA
SHLSRYFQRQYGQSPGRYRR---QITA----S----------------------------
--
>NZ_AAOF01000001.1|c2|331485-331892|+|ZP_01125790.1|hypothetical_protein
---------------------------MSQDALSDLPRCVRL-RGALFFHVDCAGRWVSE
APDAKVLTPLIMPEAQHLMDYHVMLKGACWAG-VTTA--EPPIRLSEGDVVVFPRGDAHV
MSSVPGLRAEP------------------------------------------DVDFLAR
R---------------PPQLPF-------------------------LLRQE--------
GGRFL-----------------------EAGDWS--------------------------
------------------------------------------------------------
--------------PNDGS-----------------------------------------
--
>NC_009921.1|c17|6483660-6484709|+|YP_001509640.1|AraC_family_transcriptional_regulator
--------------------MPVQVADQENDLLGELLRPIRL-TGVFQSHWLLNSPWSIE
GDS----------ESDC-VVLHYVIEGSCWIG-TEGA--RP-VLLREGDLAVFPTGRSHR
VSDRPDRRGVPLRTLLADRSPGTSSQLALG---------------GEGEQ----TRILCA
GLYYDANTVSSLYHALPWILTL---------EREAVEAELLLRDIIHQLVTD-RDGGP--
GARLITLRIFEVFFILSLHPLLRG--MMDRPEVLTALKDPAISKALLVMYTRFVEPWTIE
SLAREVGMSRSAFAASFREIVGESPSSHLVLRRMRESARLLAESDIPLGAIPQKVGYKSA
VGFHIAFRKRFGITPGEYRQRFRRVTG----KAPTEDGARDGTVRSTTLGREGSAPRVST
GL
>NC_006511.1|c1|2254783-2255637|+|YP_151368.1|araC_family_transcriptional_regulator
-----------------------------MDALSRLLTLNAP-QGSIDKNCPLGGDWQLP
HAAG---------ELSV-IRWHTVTQGEAQLE-MPTG--DA-MTLTPGKVVILPQNSAHR
LRQS-----------------------------------------GEAPT-----HIVCG
SLRLHT-TSRYFLTALPEVLCL--------ASPPHSSASIWLNAAILLLQQESERHLP--
GADVLYSQQCATLFTLAVRDWLSQ--AGTAKSVLNLLLHPRLGRVILHMLETPAPPWTVE
TLAQRVHMSRASFAQLFRDVSATTPLAVLTTLRLQIAAQTLSREALPVMVIAESVGYASE
SSFHKAFVREFGCTPSEYRK---RVSA----LGR--------------------------
--
>NC_003198.1|c1|610886-611740|-|NP_455146.1|araC_family_transcriptional_regulator
-----------------------------MDALSRLLTLNAP-QGSIDKNCPLGGDWQLP
HAAG---------ELSV-IRWHTVTQGEAQLE-MPTG--DA-MTLTPGKVVILPQNSAHR
LRQS-----------------------------------------GEAPT-----HIVCG
SLRLHT-TSRYFLTALPEVLCL--------APPPHSPASIWLNAAISLLQQESERHLP--
GADVLYSQQCATLFTLAIRDWLSQ--AGTAKSVLNLLLHPRLGRVILHMLETPAHPWTVE
TLVQRVHMSRASFAQLFRDVSATTPLAVLTTLRLQIAAQTLSREALPVMVIAESVGYASE
SSFHKAFVREFGCTPGEYRK---RVNA----LGR--------------------------
--
>NZ_ABEJ01000006.1|c1|83852-84706|-|ZP_02661612.1|transcriptional_regulator,_AraC_family_protein
-----------------------------MDALSRLLTLNSP-QGSIDKNCPLGGDWQLP
HAAG---------ELSV-IRWHTVTQGEAQLE-MPTG--DA-MTLTPGKVVILPQNSAHR
LRQS-----------------------------------------GEAPT-----HIVCG
SLRLHT-TSRYFLTALPEVLCL--------APPSHSPASIWLNAAILLLQQESERHLP--
GADVLYSQQCATLFTLAVRDWLSQ--AGTAKSVLNLLLHPRLGRVILHMLETPAQPWTVE
TLAQRVHMSRASFAQLFRDVSATTPLAVLTTLRLQIAAQTLSREALPVMVIAESVGYASE
SSFHKAFVREFGCTPGEYRK---RVNA----LGR--------------------------
--
>NZ_ABAN01000007.3|c1|110202-111056|+|ZP_02344661.1|transcriptional_regulator,_AraC_family_protein
-----------------------------MDALSRLLTLNAP-QGSIDKNCPLGGDWQLP
HAAG---------ELSV-IRWHTVTQGEAQLE-MPTG--DA-MTLTPGKVVILPQNSAHR
LRQS-----------------------------------------GEAPT-----HIVCG
SLRLHT-TSRYFLTALPEVLCL--------APPPHSPASIWLNAAILLLQQESERHLP--
GADVLYSQQCATLFTLAVRDWLSQ--AGTAKSVLNLLLHPRLGRVILHMLETPAHPWTVE
TLAQRVHMSRASFAQLFRDVSATTPLAVLTTLRLQIAAQTLSREALPVMVIAESVGYASE
SSFHKAFVCEFACTPGEYRK---RVNA----LGR--------------------------
--
>NC_011149.1|c1|602131-602985|-|YP_002145543.1|transcriptional_regulator,_AraC_family_protein
-----------------------------MDALSRLLTLNAP-QGSIDKNCPLGGDWQLP
HAAG---------ELSV-IRWHTVTQGEAQLE-MPTG--DA-MTLTPGKVVILPQNSAHR
LRQS-----------------------------------------GESPT-----HIVCG
SLRLHT-TSRYFLTALPEVLCL--------APPPHSPASIWINAAILLLQQESERHLP--
GADVLYSQQCATLFTLAVRDWLLQ--AGTAKSVLNLLLHPRLGRVILHMLETPAHPWTVE
TLAQRVHMSRASFAQLFRDVSATTPLAVLTTLRLQIAAQTLSREALPVMVIAESVGYASE
SSFHKAFVREFGCTPGEYRK---RVSA----LGR--------------------------
--
>NC_011205.1|c1|664252-665106|-|YP_002214564.1|AraC_family_transcriptional_regulator
-----------------------------MDALSRLLTLNAP-QGSIDKNCPLGGDWQLP
HAAG---------ELSV-IRWHTVTQGEAQLE-MPTG--DA-MTLTPGKVVILPQNSAHR
LRQS-----------------------------------------GESPT-----HIVCG
SLRLHT-TSRYFLTALPEVLCL--------APPPHSPASIWINAAILLLQQESERHLP--
GADVLYSQQCATLFTLAVRDWLSQ--AGTAKSVLNLLLHPRLGRVILHMLETPAHPWTVE
TLAQRVHMSRASFAQLFRDVSATTPLAVLTTLRLQIAAQTLSREVLPVMVIAESVGYASE
SSFHKAFVREFGCTPGEYRK---RVSA----LGR--------------------------
--
>NZ_ABEW01000005.1|c1|372882-373736|-|ZP_02699615.1|transcriptional_regulator,_AraC_family_protein
-----------------------------MDALSRLLTLNAP-QGSIDKNCPLGGDWQLP
HAAG---------ELSV-IRWHTVTQGEAQLE-MPTG--DA-MTLTPGKVVILPQNSAHR
LRQS-----------------------------------------GEAPT-----HIVCG
SLRLHT-TSRYFLTALPEVLCL--------APPPHSPASIWINAAILLLQQESERHLP--
GADVLYSQQCATLFTLAVRDWLSQ--AGTAKSVLNLLLHPRLGRVILHMLETPAHPWTVE
TLAQRVHMSRASFAQLFRDVSATTPLAVLTTLRLQIAAQTLSREALPVMVIAESVGYASE
SSFHKAFVREFGCTPGEYRK---RVSA----LGR--------------------------
--
>NZ_ABEH02000009.1|c1|96576-97430|-|ZP_03221402.1|transcriptional_regulator,_AraC_family_protein
-----------------------------MDALSRLLTLNAP-QGSIDKNCPLGGDWQLP
HAAG---------ELSV-IRWHTVTQGEAQLE-MPTG--DA-MTLTPGKVVILPQNSAHR
LRQS-----------------------------------------GEAPT-----HIVCG
SLRLHT-TSRYFLTALPEVLCL--------APPLHSPASIWLNAAILLLQQESERHLP--
GADVLYSQQCATLFTLAVRDWLSQ--AGTAKSVLNLLLHPRLGRVILHMLETPAHPWTVE
TLAQRVHMSRASFAQLFRDVSATTPLAVLTTLRLQIAAQTLSREALPVMVIAESVGYASE
SSFHKAFVREFGCTPGEYRK---RVNA----LGR--------------------------
--
>NC_011274.1|c1|617088-617942|-|YP_002225660.1|hypothetical_araC-family_transcriptional
-----------------------------MDALSRLLTLNAP-QGSIDKNCPLGGDWQLP
HAAG---------ELSV-IRWHTVTQGEAQLE-MPTG--DA-MTLTPGKVVILPQNSAHR
LRQS-----------------------------------------GEAPT-----HIVCG
SLRLHT-TSRYFLTALPEVLCL--------APPLHSPASIWLNAAILLLQQESERHLP--
GADVLYSQQCATLFTLAVRDWLSQ--AGTAKSVLNLLLHPRLGRVILHMLETPAHPWTVE
TLAQRVHMSRASFAQLFRDVSATTPLAVLTTLRLQIAAQTLSREALPVMVIAESVGYASE
SSFHKAFVREFGCTPGEYRK---RVSA----LGR--------------------------
--
>NC_011294.1|c1|598716-599570|-|YP_002242687.1|hypothetical_araC-family_transcriptional
-----------------------------MDALSRLLTLNAP-QGSIDKNCPLGGDWQLP
HAAG---------ELSV-IRWHTVTQGEAQLE-MPTG--DA-MTLTPGKVVILPQNSAHR
LRQS-----------------------------------------GEAPT-----HIVCG
SLRLHT-TSRYFLTALPEVLCL--------APPLHSPASIWLNAAILLLQQESERHLP--
GADVLYSQQCATLFTLAVRDWLSQ--AGTAKSVLNLLLHPRLGRVILHMLETPAHPWTVE
TLAQRVHMSRASFAQLFRDVSATTPLAVLTTLRLQIAAQTLSREALPVMVIAESVGYASE
SSFHKAFVREFGCTPGEYRK---RVSA----LER--------------------------
--
>NC_006905.1|c1|669410-670264|-|YP_215587.1|AraC/XylS_family_transcription_factor
-----------------------------MDALSRLLTLNAP-QGSIDKNCPLGGDWQLP
HAAG---------ELSV-IRWHTVTQGEAQLE-MPTG--DA-MTLTPGKVVILPQNSAHR
LRQS-----------------------------------------GEAPT-----HIVCG
SLRLHT-TSRYFLTALPEVLCL--------APPPHSPASIWLNAAILLLQQESEHHLP--
GADVLYSQQCATLFTLAVRDWLSQ--AGTAKSVLNLLLHPRLGRVILHMLETPAHPWTVE
TLAQRVHMSRASFAQLFRDVSATTPLAVLTTLRLQIAAQTLSREALPVMVIAESVGYASE
SSFHKAFVREFGCTPGEYRK---RANA----LGR--------------------------
--
>NZ_ABFH02000002.1|c1|1509654-1510508|+|ZP_03217476.1|transcriptional_regulator,_AraC_family_protein
-----------------------------MDALSRLLTLNAP-QGSIDKNCPLGGDWQLP
HAAG---------ELSV-IRWHTVTQGEAQLE-MPTG--DA-MTLTPGKVVILPQNSAHR
LRQS-----------------------------------------GEAPT-----HIVCG
SLRLHT-TSRYFLTALPEVLCL--------APPPHSPASIWLNAAILLLQQESEHHLP--
GADVLYSQQCATLFTLAVRDWLSQ--AGTAKSVLNLLLHPRLGRVILHMLETPAHPWTVE
TLAQRVHMSRASFAQLFRDVSATTPLAVLTTLRLQIAAQTLSREALPVMVIAESVGYASE
SSFHKAFVREFGCTPGEYRK---RVSA----LGR--------------------------
--
>NC_010102.1|c1|2497948-2498802|+|YP_001589194.1|hypothetical_protein
-----------------------------MDALSRLLTLNAP-QGSIDKNCPLGGDWQLP
HAAG---------ELSV-IRWHTVTQGEAQLE-MPTG--DA-MTLTPGKVVILPQNSAHR
LRQS-----------------------------------------GEAPT-----HIVCG
SLRLHT-TSRYFLTALPEVLCL--------APPPHSPASIWLNAAILLLQQESEHHLP--
GADVLYSQQCATLFTLAVRDWLSQ--AGTAKSVLNLLLHPRLGRVILHMLETPAHPWTVE
TLAQRVHMSRASFAQLFRDVSATTPLAVLTTLRLQIAAQTLSREALPVMVIAESVGYASE
SSFHKAFVREFGCTPGEYRK---RVNA----LGR--------------------------
--
>NZ_ADJP01000007.1|c1|135764-136831|-|ZP_06467816.1|AraC_family_transcriptional_regulator
MSYGMGVSVGMRGEFFNAILPQLHAQTSHMELLDRLLSLMPV-TGRLDVRCHFGSPWRID
HPES---------SEWE-FPYHVLLRGEAVVESEAEGKAEPALRMKAGDIVLFPSGSAHR
LHDGSGTPPRPA-------RAQLKDGLTVVTN-------------GRSRD---GADVLCG
RFVLPAVPQQLLRDHLPGRLLVSSVSEGDAQARDAAFAATRLARVIQLMREEAFEQRP--
GSATVVNQLSGALFALTLRCASDT--DQAPRGLLALAQRQRLQPALAAMFDEPAKPWTLP
QLAELCHMSRATFARHFEEAISRSASDVLTEIRMALAGRKLVQTTMSVAEIGEAVGYQSE
AAFQRVFKRQVGMTPAKWRA---RSSK----TGNPEEEPA--------------------
--
>NC_010084.1|c4|2815705-2816652|-|YP_001580774.1|AraC_family_transcriptional_regulator
-----------------------------MDALSQLLLLGRS-HVELDLRCLLDGAFAMP
HAPL---------PPGE-AAFHLVLAGSCRLR-TAGG--RT-LQLAEGDFVLLPGGDAHD
LLDAIAVRSRVTAPLR---EPDRDGGTVLPIKSNL----------GAADRDRASVDLLCG
RFVYARGAGELLMRTLPRMLHV--------GLRDGLATAPPLQWLTDALRSEASSAQP--
GARAIVNALGQALLAYALRAYGRD--TRMPSGWLAVAADARLGPSVLAVLQAPAQPWTVE
SLGDAVAMSRATYARHFREKAGMSVGAFVAQVRMMHACTLLQETQRGQAEIGQAVGYQSE
AAFGKAFRAVLGTTPGRWRR---AWRE---------------------------------
--
>NC_007510.1|c1|796785-797732|+|YP_368122.1|AraC_family_transcriptional_regulator
-----------------------------MDALSQLLSLGRS-HVELDVRCLLDGPFAMP
HDPL---------PSGE-AAFHLVLAGTCRLR-TADG--RT-LQLAEGDFVLLPAGGAHD
LLDAGAGRSRPVAALR---EQGAGGGAVLPVKSNL----------DPAEPGGASVDLLCG
RFVYARGAGELLMRTLPHVLHV---------GLREASGFAPLQLLTSVLRTEASNGQP--
GAGAIVNALGQALLAYALRAYGRG--ARVPSGWLALAADARLGPSVQAVLQAPEKPWTVE
SLGDASAMSRATYARHFRERAGMSVGAFVAQIRMMHACALLLDTQRGQAEIGQAVGYQSE
AAFGKAFRAVLGTTPGRWRR---AQRE----L----------------------------
--
>NZ_CH482377.1|c2|1149061-1150008|-|ZP_04939544.1|AraC-type_DNA-binding_domain-containing_protein
-----------------------------MDALSQLLSLGRS-HVELDVRCLLDGPFAMP
HDPL---------PPGE-AAFHLVLAGTCRLR-AADG--RT-LQLADGDFVLLPAGGAHD
LLDAAGHRSKPLAPLR---DSGAGDGAVLPVKSNV----------DPAATGNVSVDLLCG
RFVYARGAGELLMRTLPQVLHV---------GLRDTSGAVPLQLLTSVLRTEASNVQP--
GAGAIVNALGQALLAYALRAYGRG--ARVPSGWLALAADARLGPSVQAVLQAPAQPWTVE
SLGAAAAMSRATYARHFREKAGMSVGAFVAQIRMMHACALLQDTQRGQAEIGQAVGYQSE
AAFGKAFRAVLGTTPGRWRR---ARRE----T----------------------------
--
>NC_011000.1|c3|3508046-3508993|-|YP_002232324.1|AraC_family_regulatory_protein
-----------------------------MDALSQLLSLGRS-HVELDVRCLLDGPFAMP
HDPL---------PPGE-AAFHLVLAGTCRLR-AADG--RT-LQLADGDFVLLPAGGAHD
LLDAAGHRSKPLAPLR---DSGAGDGVVLPVKSNV----------DPAVTGNASVDLLCG
RFIYARGAGELLMRTLPQVLHV---------GLRDTSGAVPLQLLTSVLRTEASNVQP--
GAGAIVNALGQALLAYALRAYGRG--ARVPSGWLALAADARLGPSVQAVLQAPAQPWTVE
SLGAAAAMSRATYARHFREKAGMSVGAFVAQIRMMHACALLQDTQRGQAEIGQAVGYQSE
AAFGKAFRAVLGTTPGRWRR---ARRE----T----------------------------
--
>NC_008060.1|c1|346723-347670|+|YP_620191.1|AraC_family_transcriptional_regulator
-----------------------------MDALSQLLSLGRS-HVELDVRCLLDGPFAMP
HDPL---------PPGE-AAFHLVLAGTCRLR-AAAG--RT-LQLAEGDFVLLPAGGGHD
LLDAGGGRSKPLVPLR---DSRVGDGAVLPVKSNL----------DPVEPRSASVDLLCG
RFVYARGAGELLMRTLPQVLHV---------GLRDTSGAAPLQLLTSVLRTEASNVQP--
GAGAIVNALGQALLAYALRAYGRG--ARVPSGWLALAADARLGPSVHAVLQAPAQPWTVE
SLGAAAAMSRATYARHFREKAGMSVGAFVAQIRMMHACALLQDTQRGQAEIGQAVGYQSE
AAFGKAFRAVLGTTPGRWRR---ARRE----T----------------------------
--
>NC_010508.1|c1|850396-851343|+|YP_001764058.1|AraC_family_transcriptional_regulator
-----------------------------MDALSQLLSLGRS-HVELDVRCLLDGPFAMP
HDPL---------PPGE-AAFHLVLAGACRLR-AADG--RT-LQLAEGDFVLLPAGGAHD
LLDAAGGRSKPLVPLR---DSHAGDGAVLPVKSNL----------DPAEPGGASVDLLCG
RFVYARGAGELLMRTLPPVLHV---------GLRDTSGAAPLQLLTSVLRTEASNVQP--
GAGAIVNALGQALLAYALRAYGRG--ARVPSGWLALAADARLGPSVQAVLQAPAQPWTVE
SLGAEAAMSRATYARHFREKAGMSVGAFVAQIRMMHACALLQDTQRGQADIGQAVGYQSE
AAFGKAFRAVLGTTPGRWRR---ARRE----T----------------------------
--
>NZ_ABBF01000492.1|c1|8900-9895|+|ZP_02358075.1|transcriptional_regulator,_AraC_family_protein
------------------------MRAHTDKIIHWLLSSLEPVSSIFHVGQYCGDGWRAS
TAG-----------RAR-ASFHVVLHGGCWLH-VFDG--RASVPLAEGDAVFLMRDLSHA
LTSA---ATPPARTRD---AAHAAPPAMQRFD-------------PDAPD---AVGLACG
FLAFRNGSSDWIASYLPDCLVV----------RRGSAAAGQIHAIVGLIRAEAAKPGSFD
EPSPLIARLTELLFFYAVRDAVDD--DSLASGLAPLMRRAEFASLIAAVIDRPGDAWTTD
AMASFAHMSRATFFKRFVDACGQPPAQFVTLIRMKIAAEMLRQGE-AIARVAEWVGYQSE
SAFAHAFKRTVGLQPGAYRREQGGAPP----PGRTAGGPHAAGANAALH-----------
--
>NZ_ABBG01000333.1|c1|1-721|+|ZP_02365136.1|transcriptional_regulator,_AraC_family_protein
-----------------------------RDA------------------AHAAPPAMQR
FDP---------------------------------------------------------
----------------------------------------------DAPD---AVGLACG
FLAFRNGSSDWIASYLPDCLVV----------RRGSAAAGQIHAIVGLIRAEAAKPGSFD
EPSPLIARLTELLFFYAVRDAVDD--DSLASGLAPLMRRAEFASLIAAVIDRPGDAWTTD
AMASFAHMSRATFFKRFVDACGQPPAQFVTLIRMKIAAEMLRQGE-AIARVAEWVGYQSE
SAFAHAFKRTVGLQPGAYRREQGGAPP----PGRTAGGPHAAGANAALH-----------
--
>NC_010505.1|c5|5010484-5011467|+|YP_001757353.1|AraC_family_transcriptional_regulator
----------------MLCPIVRDLIVALMDVLAEVLDRVRL-GGTLLFHFELGHPWNLA
LPQ----------RPY--ALFHYVSHGSATLA-LDQE--RE-FHMSAGDLVVISRGEPHE
FYSDRRAEPFSVIDLD---RSSAHHGIVRHG--------------GSAPP---CSTMICG
KFTVAQPSRSSLLELLPPVLHL-----------KSTEDGAWLELILRRMVHESAQPRP--
GQDVVLSRLTEVLFVEVLRSWLTS-LRPGEGGWLGAITDPHIGPALRLIHKRLDRSWTLD
ELGQQVGLGRSAFSARFTKLVGQSMYRYLIARRMSEAAFLLETSDQGIARIATGVGYESV
AAFSKLFHRHHGLSPGRYRA---TRHL----RGDAQQESGL-------------------
--
>NZ_ACEW01000607.1|c1|2216-3166|-|ZP_05511097.1|AraC-like_transcriptional_regulator
-----------------------------MDLLSSLLSGIRA-EGSVVSHAVLTAPWTIR
FAD-----------GAP-LTMISVLRGGGTLL-LPDG--TE-RAVGAGDTAIVNGSAPFH
LADSPGSVHGDRAAYEIACFGPGAECAGEELGGIRWG--------LESPE---ATALIVG
AYRASGRRHERLLRALPPVLVV--------------KEDAEVCAWLETAAADAAQLSA--
GSQALMDRLLDWALVCTLRSWFDR-AGADAPSWYRGLADPVLAPALQAFHDRPAEAWTVA
SLATRAGVSRALFAKRFTLLMGRPPLAYLTECRMDEAEALLTDTDLGVAEIGRAVGYADA
FGFSAAFKRHRGLSPRAFRA---AAAA----QVPSFA-----------------------
--
>NZ_GG657756.1|c2|1353088-1354029|-|ZP_06527346.1|helix-turn-helix_domain-containing_protein
--------------------------MTGVDPLSSLLSGIRA-EGSVVSHAVLTAPWTIR
FTD-----------GAP-LTMVSVLRGGGTLL-LPDG--TP-RAVGVGDTALVRGPAPFL
LADLPATVDRPHTEYEIACFTADPECTAQDLGGIRW---------GTDPD--GATALIVG
AYRASGHRHERLLRTLPSVLVV--------------NEDVEVCAWLETAAADAARLSA--
GSQALMDRLLDWALVCTLRNWFDQ-AGADAPSWYRGLADPVLGPALHAFHGRPAQPWTVA
SLAGRAGVSRALFAKRFTELMGRPPLAYLTECRMADAEALLIDTDLSIARIARAVGYADA
FGFSAAFKRHRGQSPSTFRA---AAAA---------------------------------
--
>NC_003888.3|c18|7132189-7133130|+|NP_630533.1|AraC-like_transcriptional_regulator
--------------------------MTGVDPLSSLLSGIRA-EGSVVSHAVLTAPWTIR
FTD-----------GAP-LTMVSVLRGGGTLL-LPDG--TP-RAVGVGDTALVRGPAPFL
LADRPATVDRPHTEYEIACFTADPECTAQDLGGIRW---------GTDPD--GATALIVG
AYRASGHRHERLLRTLPSVLVV--------------NEDVEVRAWLETAAADAARLSA--
GSQALMDRLLDWALVCTLRNWFDQ-AGADAPSWYRGLADPVLGPALHAFHGRPAQPWTVA
SLAGRAGVSRALFAKRFTELMGRPPLAYLTECRMADAEALLIDTDLSIARIARAVGYADA
FGFSAAFKRHRSQSPSTFRA---EAAA---------------------------------
--
>NC_013093.1|c13|5281933-5282892|+|YP_003102147.1|transcriptional_regulator,_AraC_family
-----------------------------MDAVSELLAEVRA-RGAVFRQAVVRPPWSLR
MAT-----------GAP-LMLATMVRGEAWIV-PDRG--EA-VRIGEGDVAVVRGDVPHV
VADSPGRRAELVVTDADYCPGEEGVEPRGGPA---RTC-------GAPDE--GSAVLISG
AFERRGELSERLLLALPDVLVA--------------PGEGR---SAAMLAEEVAADRP--
GQQQVLDRMLDLMLVSALRTWFDT-PDAHAPAWCRALDDAVVGAALRLLHDSPAHPWTVA
ELAARAGVSRAGLARRFTAMVGEPPMAYLTGWRIALAADLLRGTDHTVGTIARKVGYANA
FALSAAFKRLRGERPSEHRNPEPGPRL----PSRVSSRQAG-------------------
--
>NC_009142.1|c23|5512421-5513359|+|YP_001107125.1|AraC_family_transcription_regulator
-----------------------------------MLDGTWA-RGAFVLRSILKPPWSVQ
VRD-----------RAP-LNVVAILRGTPWVV-PSTG--DA-VRLDAGDIAVMRGPDTFT
FADDPRTPTQVVVQPGPRRTTAAGAELPEAADMGVRTWINGMRNCDDGAD--DSSVLLIG
KCQGPGESATRLLSALPPFLVI-------------PSAAHVESALVSLLAEETVRNEP--
GQDLVLERILDLLLVAILREWFTR-PDTDAPASFRANGDPVVGPVLRLIHSNPGHPWTVA
ALARQTGVSRATLARRFTDFVGMPPKAYLTQWRIDRAADLLVESDATIDTVARRVGYGSA
FALSAAFKRARGISPQHHRD---RT-----------------------------------
--
>NZ_ACEW01000627.1|c1|7531-8517|+|ZP_05511528.1|putative_AraC_family_transcriptional_regulator
-----------------------------MDTLTGLLEGPRA-RGAFLMKSVFDPPWAMR
VED-----------RAP-LSVMTLVRGSAWLL-PDDG--EA-VRIGPGDVAVVRGPVPYT
LADAADT-PVGVRIGPDQRCSAQGEDVTERFSLGVRTW-------GRAREGTGSVVLLSG
TYQAPSEIGRRLLGALPAVLVR--------------PVRAADATLITLLATEVARDEP--
GQELVLDRLLDLLLIGVLRAWLAA-PGSGAPAWHRAQGDPVVGAALRLLHEDPAYGWTVE
ELARRAGVSRAALARRFTELVGEPPVAYLTGWRIALAADLLREPDATVATVARRVGYGSA
FALSAAFKRVRGVSPQQFRE---GAGA----GAATAPGVSGTVVLG--------------
--
>NZ_DS570910.1|c1|31812-32753|+|ZP_05016795.1|AraC-family_transcriptional_regulator
-----------------------------MDALAGLLEGPRA-RGAFMIRACFDPPWAVR
IED-----------RAP-LTVMLMVRGEAVVL-PDAG--EP-VRLRPGDLAIARGPDPYT
CADDPGTAPQALILPGAECSYPDGRSLNGSMDLGVRTW-------GDRLD--GGTVVLIG
TYLMEGEISNRLLDALPPLLSL--------------TTDVWKCPLTPLLMEEIVRDEP--
GQEVVLDRMLDLLVIAALRAWFSR-PEAKAPAWYAALADPVVGRVLRLMQDDPAHPWTVA
SLAAKAGVSRAALARRFSELVGEPVMTYLTGWRLALAADRLREGNATLEAIARQVGYGSA
FALSSAFKRGYGVSPQEFRL---RVGP----T----------------------------
--
>AF521085.1|c1|102600-103541|+|AAP42877.1|NanR4
-----------------------------MDPLAGLLDGPRA-RGAFLLRMVMDPPWSVR
IED-----------RAP-LCVMTVARGEAWVV-PDRG--EA-RRLGPGDVAVVRGPDPYT
VAGDPATEPQAWILPGEVCRTAGGEDLAERMALGVRTW-------GNSEH--GATTMLVG
TYRMDGEISRRLLDALPPLLVL----------GRERCDSPLLPWLGEEIVKEEA------
GQTAVLDRLLDLLLISVLRAWFAR-PEARAPAWYRALGDPVVGRALRLLQNNPGHPWTVA
LLAAETGISRAVLARRFTELVGEPPMAYLTGWRLDLAADLLREPDATLGAVARRVGYGSS
FALSAAFKRVRGVSPREHRS---AASA----G----------------------------
--
>NC_013093.1|c13|5216993-5217976|-|YP_003102115.1|transcriptional_regulator,_AraC_family
-------------------------MMCGMDVLADALRVRGA-RGTLGVRLEAGGAWSTR
LDP----------LPW--AALHLVTEGEVWLS---AG--GPALRVGAGDAVLVPQGLAHG
TSGAPGTRPRPCDQRAAEAAQATGRALRL----------------GDGPV---DTRMITL
RYELGE-------SLFPDDAPL----------LITAGERPQLAATAALLAAELAEPQF--
GTTAAVNSIVDLLLVQFARAWLAANPAQRAGSWLGALLDPLVREALTRLHRHPARAWTTA
NLASAVNVSRATLSRRFPAALGESPGAYLTRLRMDLAAIRLRDTDEPVESVASSVGYGSA
KAFSRAFQRSRGCPPSEHRFRA-RCRGQAPRTGSLGAGIAGTGVERAAS-----------
--
>NC_010162.1|c13|8870970-8871953|-|YP_001617009.1|AraC_family_transcriptional_regulator
-----------------------------MDALSAVLAPVRL-RRTRWVSTVGRAPWGVA
LPE----------VKSC-IRFHYVVRGSAWLSVDKTD--EPRVALSGGDLAVLPLGHAHA
LRDHPRSPPRSFAELVRCAPNPTHDVIHIDLG-------------TKGPE----TTFITG
GFVLDDPLATPILATLPPLIRM---------TPDTEQAVPSFLENIQFITREIETNRP--
GSEIVLLRMADVMFIQILRAYLAR-LPEDGGGFLGALRDPSTAAALGAMHRRAEEPWTVA
SLAKEAGLSRSVFAARFAALVGEPPLGYLTRLRMQKAAVLLREGA-PLAKVSRLTGYSSE
ASFSHAFRQWAGMAPGAWRRHLESSDP----SAASGGGRRALRA----------------
--
>NC_013440.1|c14|4136572-4137513|-|YP_003267384.1|transcriptional_regulator,_AraC_family
--------------------------------MSDVLEVIRF-STSFFGRFVLGAPWALR
IPE----------KPT--SSFYAVAQGQPRLLVNGHA--EP-LCLAPGDVAIVPRGSGHQ
F-DDGDRRAPPRQGFIDGAALRSATGMLG----------------GAGAK----TILIAG
CFTFSVGARHPLLRALPAALHL----------PAHAPPRPELAATIQLITAESATPRP--
GSALILARLADVLLMQALRAQVTL---SANGGL-RALSDPVVGPALSLIHTRYRAPWTVA
ALATAVGVSRSGFAQRFRALLGEPPLRYLVGWRMTKAAARLRVTSDSVAEIADEVGYASA
AAFSKAFKQWAGVGPDAFRR---ANAP----ATEDTGAAVRPSVT---------------
--
>NC_013131.1|c22|8362605-8363564|+|YP_003117864.1|transcriptional_regulator,_AraC_family
-----------------------------MDILSDTLEVLRT-GRPMVTRTDAHGPWALK
YQP----------ISG--ASFHVVMEGRCRLL-RPEG--EP-LALGPGDIVFLRRGSGHT
MCDPDTPHPEPMDFAPHRLDDSSPIGQFTVE--------------GPGPR----TVLVCG
AYKIDADHRHPLFTNMPEIIHL----------PAAPGRYPVLRSAIDQLCAEFRSPQP--
GSDAIVTALVDLLLLHILRSWYAELPKDQTCGWAAALTDHAIAPALKAIHDAPGDPWTVE
SLAARTGLSRAAFARRFAAVVGVPPLTYLTNWRMATAARLLRESPSTVNTIAQRTGYTSE
FAFAKAFKRHFGSPPGSYRKP--TVSA----PGSMVPRYDD-------------------
--
>NZ_DS570423.1|c1|12744-13712|-|ZP_05000781.1|transcriptional_regulator
-----------------------------MDVVSDAIAAVRI-GRPSSDRMRVSGSWCAR
FDA----------YDG--AGFHVVLEGTCWLLPDGGG--EP-VALGAGDAVLLPHGTGHV
IADSAVDEATVRGAVR-FEDWRAEERSERPSRQS-----------PAAGA---AVEMLCG
KYRLDRSRVHPLMAELPRVVHL----------ANRVGAHPELRSAIDLLGRELGGQRP--
GAWIAVPNLLDLLLVYMVRSCLDE---GATGVWPAVLGDPVTAAALRALHADPAAAWTND
RLAAEAGVSRPTLARRFTALVGRPPMAYLTWWRLTFAATLLRDTADPLAAIARRVGYATP
YAFSHAFNREFGTTPGRYRDD--RAAGVLLHETPITPAT---------------------
--
>NC_008726.1|c2|1062687-1063601|+|YP_951857.1|helix-turn-helix_domain-containing_protein
-----------------------------MEVL---MSLLRP-EAVLSKVITGGGRWSVR
KPR-----------YGD-PAFCLMLEGLCVLD-ADGL--DP-LELRQGDFLLLPQTPEFT
LGAGGDVAPTFAGLDH---SRHTRHG-------------------GESEP--VTMRMLGG
YFRFDAANAPLLVALLPPLILV----------RADQPGAQRLHRLVELITGEADADGA--
CRDIILQRLVEVLLIEAMRVHTAADLGGAQRGLIAGLADPVLAPALMELHADVTHGWTVE
QLARVASVSRAVFAQRFTRTMGMPPMQYLLEWRVALAKELLRTERPAIAQLAQRVGYQSA
TAFTTAFTRVAGCSPTEFAR---TSGY----VGDTG------------------------
--
>NC_008146.1|c2|1135833-1136795|+|YP_638209.1|AraC_family_transcriptional_regulator
---------MRWRWLLRPNSLSGVNPDDGLGPVEMLVSLLRP-KTVESKIISGAGEWSVR
EPR-----------YAD-PAFCVMLEGSCVLR-LDGY--HP-IELHAGDFMLLTDMPEFV
MSSGHGAMSTVL-------AAGPVNGVARHGD-------------PDGPA---SMRMLGG
YFRFERENAPLLAPLLPRIVLV----------RHDEPRASRLSRIVALISEETGSAAP--
-SELILVRLVEVLLVEAMRLRAAP-VEGVERGLVAGLDDPVLAPALRKMHTDIAFGWTVE
RLARAAGVSRAVFAERFSRTMGMPPMQYLAQWRMALAKEMLRTEDVSIAEVARRTGYLSA
SAFTTAFTRMTGTSPSAFAR---ASV----------------------------------
--
>NC_009077.1|c2|1143706-1144626|+|YP_001069364.1|AraC_family_transcriptional_regulator
-----------------------MNPDDGLGPVEMLVSLLRP-KTVESKIISGAGEWSVR
EPR-----------YAD-PAFCVMLEGSCVLR-LDGY--RP-IELHAGDFMLLTDMPEFV
MSSGHGAMSTVL-------AAGLANGVARHGD-------------PDGPA---SMRMLGG
YFRFERENAPLLAPLLPRIVLV----------RHDEPRASRLSRIVALISEETRSAVP--
-SELILVRLVEVLLVEAMRLRAAP-VEGVERGLVAGLDDPVLAPALRKMHTDIAFGWTVE
RLARTAGVSRAVFAERFSRTMGMPPMQYLAQWRMALAKEMLRTEDVSMAEVARRTGYLSA
SAFTTAFTRMTGTSPSAFAR---ATV----------------------------------
--
>NC_007766.1|c1|526765-527682|+|YP_473084.1|AraC_family_transcriptional_regulator
----------------------------MSDPLAEMVTLLQP-AARYSKLVSGAGTWRVE
RQE-----------TGQ-PFYCVVLEGYARLS-AEDK--Q--LTLREGDFILIPAAHAFT
MSSLDDGLSPGIDPL----TVTMLPVETRHGD-------------PEGAP---NARLLVG
HFAFGSPDATLLVSLLPRIIHI--------------RGDSRLSAIVQLVTDEARAERP--
GKNMILARLLEVLLVEALRSNAGE---KAPLGILRGLGDPRLAVAIRRLHENPSKEWTVQ
QLAGEAALSRSAFFNRFRRAVGIAPMEYLISWRMALAKNLLSQEDIGIQEIAERVGYGSA
SAFSTAFTRFAGLPPSRYAE---QSKT----ISNAAA-----------------------
--
>NC_010997.1|c1|750139-751056|+|YP_001985319.1|probable_transcriptional_regulator_protein,_AraC
----------------------------MSDPLAEMVTLLQP-AARDSKFVSGAGTWRVE
RQE-----------TGQ-PFYCVVLEGSARLG-AEDK--Q--LTLREGDFILIPAAHAFT
MSSLDDGLSPGIDPL----TVTMLPVETRHGD-------------PEGAP---NARLLVG
HFAFGSPDAALLVSLLPRIIHI--------------RGDSRLSVIVQLVTDEARAERP--
GKNMILARLLEVLLVEALRSNAGE---KAPLGILRGLGDPRLAVAIRRLHENPSKEWTVQ
QLAGEAALSRSAFFNRFRRAVGLAPMEYLISWRMALAKNLLRQEDIGIQEIAERVGYGSA
SAFSTAFTRFAGLPPSRYAE---QSKT----ISNAAA-----------------------
--
>NZ_ADDJ01000013.1|c1|150696-151598|-|ZP_06296823.1|transcriptional_regulator,_AraC_family
----------------------------MVDPLAEVVALLQP-APTFSKVLSGAGRWRAS
RTE-----------VGQ-PFYCVVLEGSLRLS-VNGG--EP-LILQADDFVLVPEVFGFE
ITSIDPPDDDAAPNLA---PTPLPDGSFRFGDA------------SAAPD----AQWLAG
LCAFGSPDAALLVSLLPELVLV--------------RGDRRLATLVKLVREESQARRP--
AREVVLARLLEVLLIEALRSTQTG----ASPGLVRGLADARLALAIRQMHERPQEPWTMA
QLAKIAALSRSSFFERFSRAVGVAPMEYLLSWRMAIAKNLLRRNTLSVATIAARVGYGSA
SAFSVAFTRYVGVSPTGYGR---GEGK---------------------------------
--
>NC_007511.1|c2|740692-741669|-|YP_371419.1|AraC_family_transcriptional_regulator
--------MAESVFATIENPIFIGESPAMIDPLTEVVTLLQP-GARHSKYIRGASPWSIS
RTV-----------AGE-PFYCAILDGGCRIA-IDGH--AP-IELLPGDFMLIPAVYGVA
MSSLEPPAPGVETAP----PVELDPGEFRIGD-------------PANPV---DTRMMAG
NCSFGSSDASLLVSLLPRFVHV--------------RGEPRLTTLVQLVRDESRAQRP--
ARDIVLARLLEVLLIEALR-FTSG--TNASPGLVRGLADSRLAAAIRRMHERPAHPWTIV
ELAKEAALSRSTFFERFSRAVGLAPMEYLLTWRMALAKDLLRRNEGRIAEIAGRVGYSSA
STFSVAFTRHVGRPPAQYAR---EEQA----TANET------------------------
--
>NC_011001.1|c4|2509639-2510613|+|YP_002234837.1|AraC_family_regulatory_protein
--------MAGTVFATIENPLFFCESPAMSDPLTEVVTLLQP-GARHAKYVRGASPWAIN
RVV-----------AGE-PFYCAVLDGGCRIA-IDGH--AP-IELLPGDFVLIPAAYGVA
LSSLDAPAPGVETAP----PVPLAPGEYRIGD-------------PTNPI---DTRMMVG
NCSFGSPDASLLVSLLPRFVHV--------------RGEPRLTTLVQLVRDESHAQRP--
AREIVLARLLEVLLIEALR-FTTG--THASPGLVRGLADSRLAAALRRMHERPAHPWTIV
ELAKEAALSRSTFFERFSRAVGVAPMEYLLTWRMALAKDLLRRNEGRIAEIAARVGYRSA
STFSVAFTRHVGRPPAQYAR---DEQI----AIEP-------------------------
--
>NZ_CH482378.1|c3|2533946-2534923|-|ZP_04943385.1|Helix-turn-helix_protein
--------MAGTVFATIDNPLFFCESPAMSDPLTEVVTLLQP-GARHAKYVRGASPWAIN
RTV-----------AGE-PFYCAVLDGGCRIA-IDGH--AP-IELLAGDFMLIPAAYGVA
MSSL-KPPPPGVDTAP---PVMLDHGEYRIGD-------------PANPV---DTRMMAG
NCSFGSPDAALLVSLLPRFVHV--------------RGEPRLTTLVQLVRDESRAQRP--
AREIVLARLLEVLLIEALR-FTTG--THASPGLVRGLADSRLAAALRRMHERPAHPWTIV
ELAKEAALSRSTFFERFSRAVGVAPMEYLLTWRMALAKDLLRRNEGRIAEIAARVGYSSA
STFSVAFARHVGRPPAQYAR---DEQA----MVSES------------------------
--
>NC_008061.1|c1|451686-452663|-|YP_623228.1|AraC_family_transcriptional_regulator
--------MAGTVFATIDNPLFFCESPTMIDPLTEVVTLLQP-GARYSKYVRGASPWAIS
RTV-----------AGE-PFYCAVLDGGCRIA-IDGH--AP-IELLAGDFMLIPAAYGVA
MSSL-EPPPPGVDTAP---PVMLDHGEYRIGD-------------PANPV---DTRMMAG
NCSFGSPDAALLVSLLPRFVHV--------------RGEPRLTTLVQLVRDESRAQRP--
AREIVLARLLEVLLIEAMR-FTTG--THASPGLVRGLADSRLAAALRRMHERPAHPWTIV
ELAKEAALSRSTFFERFSRAVGVAPMEYLLTWRMALAKDLLRRNEGRIAEIAARVGYSSA
STFSVAFARHVGRPPAQYAR---DEQA----MVSES------------------------
--
>NC_010515.1|c4|2382855-2383772|-|YP_001778897.1|AraC_family_transcriptional_regulator
----------------------------MIDPLTEVVTLLQP-GARYSKYVRGASPWAIS
RTV-----------AGE-PFYCAVLDGGCRIA-IDGH--AP-IELLAGDFMLIPAAYGVA
MSSL-EPPPPGVDTAP---PVMLDHGEYRIGD-------------PANPV---DTRMMAG
NCSFGSPDAALLVSLLPRFVHV--------------RGEPRLTTLVQLVRDESRAQRP--
AREIVLARLLEVLLIEAMR-FTTG--THASPGLVRGLADSRLAAALRRMHERPAHPWTIV
ELAKEAALSRSTFFERFSRAVGVAPMEYLLTWRMALAKDLLRRNEGRIAEIAARVGYSSA
STFSVAFARHVGRPPAQYAR---DEQA----TVSES------------------------
--
>NZ_ACEY01000333.1|c1|64462-65292|+|ZP_05528826.1|putative_AraC-like_activator
----------------------------------------------------------MR
FDA-----------PRV-VKFNAVRRGTCQLEVDGID--EP-IDLAEGDCYLLTRPRSFT
LRSDPETAPVDGGVVF----ARAEDGIARA---------------GQGDD----VFLIGG
GFSFGTRAQELLLDRLPPIVHV----------PADTPHAETVQWALTAIDQELTHRPM--
ASTLIAEHLAVIMLVHVLRLHLER-APHAVSGWLAGLADPVVATALTCLHRDPARSWTVA
DLADTAAVSRSTLAARFKATVGQGPLEYLTRWRIELAARQLREGNATLASIAHSVGYGSE
SALSVAFKRVLGMPPGDYRK---HPTM----P----------------------------
--
>NZ_GG657756.1|c12|8308399-8309313|+|ZP_06533655.1|probably_a_transcription_activator
-----------------------------MDPLEDVLTLLKT-RSHLSASLVAGGRWAVR
FDA-----------PRV-VKFNAVRRGTCQLEVDGID--EP-IDLAEGDCYLLTRPRSFT
LRSDPETAPVDGGVVF----ARAEDGIARA---------------GQGDD----VFLIGG
GFSFGTRAQELLLDRLPPIVHV----------PADTPHAETVQWALTAIDQELTHRPM--
ASTLIAEHLAVIMLVHVLRLHLER-APHAVSGWLAGLADPVVATALTCLHRDPARSWTVA
DLADTAAVSRSTLAARFKATVGQGPLEYLTRWRIELAARQLREGNATLASIAHSVGYGSE
SALSVAFKRVLGMPPGDYRK---HPTM----P----------------------------
--
>NC_010581.1|c5|2973740-2974681|-|YP_001833689.1|AraC_family_transcriptional_regulator
-----------------------------MDPLSDVLALLKL-RSYVSGGFDAGGDWAIS
FGP----------HDG--IKFHAVVTGSCWIS--VEG--DAFTRVNTGECFLLPRGRPFR
IASDPSVEPVPVSEVL----PPQPNGRIMTYN-------------GGGDY-----LSIGG
YFTLSEGQSELLLNVLPPLLHI-----------RDEPGSATLRWCVERMRQELAEGQP--
GDFIVAQQLATIVLVQALRLYLSG-RTTEEAGWLFALADKRLRAAIVAMHGAPDRRWTLH
TLASVAGMSRTAFAVTFREAVGLSPMEYLAHWRMTLAAEELAHSRKSIAAIALEVGYESE
KSFSTAFKRVKGRPPREFSRL--QKQI----SGRMDQAVFK-------------------
--
>NC_002678.2|c2|1625042-1625998|+|NP_103433.1|transcriptional_regulator
---------------------------MTDDPFSDILKFTSA-QTMVTGGFTAGEPWALR
FPA-----------PEK-IKFFAVVKGSCWIRLEGEE--EP-VHAKTGDVLLLASRRSFI
LASDLS--VPPLDAMAVFSGCRIAQL-------------------GDGKD----FTHIGG
HVLLDQASGRLLADVLPPWIHI----------HASSPQATILRWILDQLVREQADGQP--
GASLASAQLAQLLFIQVLRAHLQT-SSLMPAGWLRALADPRLAPALRLMHGDPGRDWHLE
ELARAAAMSRTSFAFHFRQTAGVAPLTYLTQWRMHLAERALREEDTPVAVLARSLGYTSE
SAFSNAFKRATGTAPKRYRT---AGKA----ERSGDAEARSLSLVS--------------
--
