>NC_009972.1|c13|5089620-5092703|+|YP_001546751.1|ATPase
------------------------------------------------------------
--MGRSGQA----------RRRRRTS---RFLEQVGS-----------------------
------------------------------RRKRAAVAPLQLD-----G-----------
-REETA------------------------ALLATLD-----------------------
-----ELAPLLGEQRIMVEDE-----ELAN------------LLSRCTIDLRARAERDEL
R--PAFLRDEDLLAVQQLLTSMDHVNPIILGKARSGKTALVHELVRRLVKTPENMPEKLR
D----LPMYEMTPASLLAGLQFGEGWRANLSTLFGKLA-EHGAVLLFIRDIHAAVGAGVK
RGDDDDDDLAAALESNLHNGKLKIIAEARPDRWQAIAADRESFADLFTSIQLAIPKPEQV
AEIVQHVAERHRQRANIEATSQA--TAIDIAGRFILNQAFPGKAIELL-EDS--------
-------------------------------------------------------LLLAE
RQHE--------------------------------------------------------
-------------PEVLPRHVVECFGNRTGLTKLLLDENERFDEIALRRSFSERVLGQDP
SVIAMVQKLALLKARLHDPARPMGVYFFLGPTGVGKTELAKTLASTLFGSEERFVRFNMA
DYSGEYDFAQLFGRTWGDSDAERRGK-L--TMALINLPFA--VLLLDEFEKAHRSIFNRF
LQLFDEGILVNAMG-EEINLRNTIIIMTSNFGATIVQGETWGFAAREGI-EA--------
----------VERRVLRETEEFFSPEFINRLDGVIFFKPLSQSDMRKIAAREMRKLFERE
GLVRRNVQVELDDAVLDILLKHGYSIRYGARYLKRQIEKMVTYPLASALLTRPEQTNGLL
RLYVAREQIKASWVANDDDEPLLPSPEEQALQLPQTIEEAAQFIEQLHNRLKHLIKQLNV
VEARERQTELMDEMSSPSFWDDHEQAQFLLTELSNVARRVGRCDDLRRLYDDADQLLQRI
RERNERRLFPELMRMAKRLERDLRFAELEMLFSNPEDWHDAYIILESDQAGLRWVRNLAN
AYLEWSLGKRFEAKVIDETPAEDNLIRVTLQISGSGAFGLLRSEAGTHRISETGGEPRLK
TVTQVQITVLPVPTEDTPAPASSDIEMAVMNTRADGYFLRKLRVTGRAIHRYSGAAAFAC
AGSERAVREMLLSILLGRLAMKQLDDFIQPSDDAWGSVVRSYHLGKRSTIKDPRTEIVHT
NPKAALAGELDLFIEAALRWRAALPARR--------------------------------
-------------------------
>NC_010162.1|c1|466742-470395|-|YP_001610971.1|ATP-dependent_Clp_protease_ATP-binding_subunit
---------------------------------------MHFTIPLFERRTTNVECVTLG
LGPSTRSRE--------GRHAERVRR---LLTEELR-----AVFEKARAAELARLEFPRG
IRIEKVRLELTLSGAAERRKVSGLCPVVLEPRWASEHERVVFAYHPARQ-----------
-GEAAPIREDLPLDEQLRALFQVAWAALDDDEIARLWSRGKE------------------
RITALSFSCAPRSALADLPERPGEDDTGADPAFRWKKRRGLKVLPNLGVSLTQRAAQGNL
D--AGVPRSPQREQLALLLGAGRAQPVVVVGPPGCGKTTLIHRAVLDLLA--ADGYGAHK
NLDRVRDVVAVSGRRLIAGMSHLGDWEKRCVELVEDAR--SRGAILVIDDLHHFGRIG--
RSRESERSLADFFRGPLSRREIVMVGECSPEAFRLLEQESPSFAALFTPLFLPEATPSET
FRLMVREVRALEQRHAARVSPYVLRTILDLGGSLLSAQALPGKAIDLLREVVRAGVTPSP
SGE--PGPARGHAPRPVGS-----------------------------------------
------------------------------------------------------------
------------------QDVLRLLSQKTGVPRLLLGGDEPLDAGALEEELGRRVIGQPE
AVRAAADLVSRIKAGLVDPRRPYGVYLFTGPTGTGKTELARCMAELIYGSASRLLRFDMS
EQSGPDAPARLVGDR-----YAPDGL-L--TQRVREQPFS--LVLLDEIEKAHPSVHGLL
LQLFEDGRLTDAAA-RPAHFHHAVVVMTSNLGARSRALVGFGGAGLSEARALAIAEE---
----------SAQEVARAVRDFFPPELFNRIDRVVPFRPLTPEVAVRVAEKELDRLLGRR
GLAERSVFVRRGAGVAERIAREAFVAEDGARSVKRFIEDEIGSLLSDALTRG--APAAMQ
VIRIFTTAR--------GDGAAAAGDGAASRGSPGSSGSPESPASPAFALHREALAEAEP
AAAAWALAPLMARPLGALTAELSPLLEFVDALDRSDDLARLSERIRYHLAEHGRTAAEGP
EAHEHAEAVYNLDAMRGAIRAFRERIDLVRRRSGDDDEQQHLDLEVRRFGYVTVEDEWSR
SRVRLFHRRQLPGPLRRPAKQEVLECIAEGHALRRALRKVDEPGQHAVLIELLRAARLDE
GPAGARDEPEEGLFEALARAYGEAGGEVEGWACAPLGSASGGDGRARVVEQGRGAAGLEA
MLAAPGRGAELLVLSVVGLCVMDFFELETGAHVWTSLSRGPEVVRVRVLPARPGLSPARA
VREHLDLQAAFDEAARRGRALPPNPAELLPVVRRVRFDPPRRPGATAPIEIEDYVMGYAE
SSLVRSLSQALAPLWLLRMSREDVA
>NC_010162.1|c1|470422-474021|-|YP_001610972.1|ABC_transporter_ATPase
----MSTSSSDDGRSAPAPEDGAGASAEGARDASEGRTARALVFVRERFDGACLAFPVAA
PDVASFGRDEDVLVEQQLFLREHAARARPDAVSRLSFPRGTGLLSVSVPVPRDDLPRKLR
NEVPVSFPCVVVPAGELDARGQAEAPAAERGDAWVLVPSLGHAFYVEAGEPIEAAIRHEV
RRLLAS------------------------QVLSTWEHLGL-------------------
LPGSAHRLEVLHAPLPEPERAGGHGPRGASIVERARRKKAVETLVAVATPLHVAAQRSPL
ATPPLACRDAELARLAALLDGEERLGVLLVGPEHAGKTALALAYVARQT-----------
-----RLVYATSGAQLIAGMSGLGQWQERIHGVMEAA--AALDAVLYFENLDDLLAE---
RVDGGHVDLAGAMRPYLDEGRVRVLCELRDDRLDALEGRHWAFFAGLSRIRIDPLSAADT
RKALAERDGRVEPHRPA-VAGDALTALVDLAERYLPYSAFPGKAVRLYEDLRAVH-----
------------------------ERERTAQGEP--------------------------
------------------------------------------------------------
-------------VTLGRSDLYELFSMRTGMPAFLLRDDLPLRVDRVARDLGASVVGQER
AVRALAETIAVVKAGLSPPDKPLAAFLFVGPTGVGKTELARALAGLLFGSPDRLARFDMS
EFSSEGAADRLIRGTDG-----AGGL-L--TQRVREQPFC--VLLLDEIEKAHRAVFDLL
LQVLGEGRLSDARG-RTAYFHNAIVIMTSNLG--------AAERRARAGFAGERGAEAPE
EQAAL-----DEAHYQRVVAGAFRQEFVNRIDRVVPFRALTRAELAEVARLTARRLAQRR
GLSEAGVALEVSERALARLAEDGHAPAYGARALRRHVEEHLAAPLARLLARLGGDARDLT
VWVTEAGEPEAAAP---ADGAVVARAETPALRLVARRRRAAKAAQQAFGVEQVGELRREV
DRWMSLGPLEQLKEQLDFLLTQLSLASGPSRDRRKEIDAAALQAEHHRLSELWGQLERAQ
EEMHGVEELALMALLEGEEVRGLAGEARAAWEGVRKVLPRALVATESRRDAITLILEELD
AGAFERWLAPLLRELPRRGWGATLHIDGDRAGPGDGAWPASRRWGPPRAPGDVLDALDEP
KRGFRSVLLRCTGAYAGAFLSLERGLHRLVARKRDAGEAGEAGEACEASKDGRLHVFVHF
VAHAADIAEDQWEHRSLAPPPAGSAAARRRGAAARELDEVEGAALIAGRRARIAMDPAWY
WERLDEVALTHLLLFEDEGSGLDRSEYFSAGGDGSALDDLPDA-----------------
-------------------------
>NC_012489.1|c5|4571986-4574649|+|YP_002763390.1|putative_chaperone_ClpB
------------------------------MSVNLRGLIAKL-NAPTRSAVEAAAGLCLS
RTNYDVEIEHLFVKLL-D-SSDSDLA---AILKHFGVNR--SRLADDIARALDKLKTGNA
R-----TPSISPSVVNVLREAWVLGSVEY-GAPRVRSGHVMLALLSVPELQRLSAEFTKE
FEKIPA------------------------DVLKKDFVTIT-------------------
ASSAEATAEIGSIDSVAAGAS-----ASSSGGGTAKAGGRTPNLDSYTVDLTANAKSGKI
D--QVLGRDFEVRQVVDILTRRRQNNPILVGEAGVGKTAVVEGFARRIVD--GDVPPPLR
N----VRLLSLDLAMLQAGAGVKGEFENRLKGLIEEVKNSPTPIILFIDEAHTMIGAG--
GAA-GQNDAANLLKPALARGELRTIAATTWSEYKKFFEKDPALSRRFQLVKVEEPTEDVC
CIMMRAVVPSLEKHHTVHILDSGMEAAVRLSHRYLADRQLPDKAVSVL-DTACARLALGQ
SATPGPVEDCKRILDDLALQDRVLNREQTAGADH---RERLAG-IAERRTQVEAQLAELE
GRWLKEKDTVSKILEVRGKLVAESANADQTAADALRAEYTQAM----------------S
ELEALQGENPLVRPFVDASIVGEVISGWTGIPVGKMMSDELGTMLELEKHLGARVIGQDH
ALVDISRRVRTSKAGIEDPNKPKGVFMLVGPSGVGKTETALALSDMLFGGERNIVTINMS
EFQEAHTVSTLKGSPPGYVGYGEGGV-L--TEAVRRRPYS--VVLLDEVEKAHPDVLELF
FQVFDKGVMEDGEG-RQIDFKNTIIILTTNAG--------TDTIMKLTADPETLPF---P
DA--------MAKALKPELDAVFKPAFLGRM-VIVPFYPVRDENLKQIVRLKIGKI-SRR
LRETHKLTLQHDETLISQVAARCTEVESGARNVDNILSNTLLPEISRLLLASMAEGTRPS
ALKVGVA----------EDGDFTYEAVV--------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NZ_ABHC01000034.1|c1|26293-28644|+|ZP_02191831.1|ATPase_with_chaperone_activity,_ATP-binding
-----------------------------------------MLSKNLEQSLHRALGIANE
KHHEYATLEHLLYALS----EDQDAL---AVLKACGVDV--DKLRLDLMTYIDTELNG-L
VGAALEDAKPTAGFQRVVQRAVIHVQSS--GREEVTGANVMVALLSE-R-----------
-ESHAV------------------------YFLQEQEMTRF-------------------
DAVSYISHGIAKVHGQTGSEQRKVDGADEQAKADQVNKQGHEALDAYCVDLNTKAAAGKI
D--PLIGREKEVDRTIQILCRRTKNNPLFVGDPGVGKTAIAEGLAKRIVD--GDVPEVLI
N----NRIFALDMGALLAGTRYRGDFEERLKAVVNELE-QNPHAILFIDEIHTVIGAG--
ATSGGAMDASNLLKPALQSGGLRCIGSTTYKEYRGYFEKDRALVRRFQKIDVNEPSIEDT
IKILKGLKPYYEKHHNVRYTADALKTAVELSAKYIGDRKLPDKAIDII-DEVGA------
--------------------------------------------AQMLVPASRRR-----
------------------------------------------------------------
-------------KTIGVKEIEEIVAMIARIPPKSVSTDDKTVLANLERDLKTVVFGQDS
AIASLASAIKLARAGLRESEKPIGSYLFSGPTGVGKTEVARQLALTL---GVELIRFDMS
EYMERHSVSRLIGAPPGYVGFDQGGL-L--TDQIDQHPHC--VLLLDEIEKAHPDLFNVL
LQVMDHGKLTDHNG-KSVDFRNVILIMTTNAG--------AADLAKEAI-GFGRSV----
----------REGDDTEAINRMFTPEFRNRLDAIVGFKALSPETIDRVVDKFVMQL-EAQ
-LADRGVSIELTEAARGWLAKRGYDRLYGARPLARVIQEHVKKPLAEELLFG--KLVKGG
LVRVDM-----------VDDGLVFDIGEEPTSGRPSSRKNNDSDGGSGGEPAKVPELVP-
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_006348.1|c4|2364731-2367031|+|YP_103844.1|ATP-dependent_Clp_protease,_ATP-binding_subunit
-----------------------------------------MIAQELEVSLHMAFMEARQ
ARHEFITVEHLLLALLDNPTAAEVLR---ACAANI------EDLRQNLRNFIHD-NTPTV
PGTDDVDTQPTLGFQRVIQRAIMHVQSTSNGKKEVTGANVLVAIF---GEKDSHAVYYLQ
QQGVTR------------------------LDVVNFISHGI-------------------
--AKTSSGEAAKPADANAEGE-----DAGAQKET--------PLAQFTQNLNQMAKDGRI
D--PLIGRESEVERVVQVLCRRRKNNPLLVGEAGVGKTAIAEGLAYRITR--GEVPDILA
N----AQVYSLDMGALLAGTKYRGDFEQRLKTVLKELK-ERPHAILFIDEIHTLIGAGAA
SG--GTLDASNLLKPALSSGTLKCIGATTFTEYRGIFEKDAALSRRFQKIDVTEPSVEQT
VAILRGLKSRFEEHHGVKYSSGALSAAAELSARFITDRHLPDKAIDVI-DEAGAAQRVL-
-----PKS----------------KQKKTIGKSE--------------------------
------------------------------------------------------------
--------------------IEEIISKIARVPPQSVSQDDRSKLQTLDRDLKSVVFGQDP
AIDALAAAIKMARAGLGKLDKPIGAFLFSGPTGVGKTEVARQLAFTL---GIELIRFDMS
EYMERHAVSRLIGAPPGYVGFDQGGL-L--TEAVTKKPHC--VLLLDEIEKAHPDIFNVL
LQVMDHGTLTDNNG-RKADFRNVIIIMTTNAG--------AESMQKATI-GFTTRR----
----------ETGDEMADIKRLFTPEFRNRLDATISFRSLDEEIIMRVVDKFLIQL-EEQ
-LHEKKVDALFTDALRKHLAKHGFDPLMGARPMQRLIQDTIRRALADELLFG--KLVNGG
HVTVDV-----------DENDKVLLSFDKTATPPSKPNEEAVEVE---------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_009972.1|c2|1000501-1002831|+|YP_001543655.1|ATPase
----------------------------------MANTFERL-NPNIQHIMLLAQEEARS
LNHSFLGPEHLLLGLL-R-QKEGLAV---QILHELGVFY--PQTRQIIQTMITPHARD-E
QTLLPAYLPLAPHTKTLLDTAAREADQL--NQQQIGPEQLLLALARE-A-----------
-KGFVP------------------------YILARLGLHG--------------------
SIVCDSLHAALQAKATEVAPA-----HAADTS----------LLAKLGINLTEEARNGRL
D--PVIGRSAEIERTIQILRRRTKNNVVLIGEPGVGKTAIVEGLAQQLAH--GAIP-SFQ
K----TSVWSLDVGSLLAGAIYRGQFEERLKSVIDQI--SDHDAILFIDELHMIVGAG--
ASE-NTVDAANMLKPALARGKLRVIGATTFDEYSQHIEKDSALKRRFQPIVVQEPGIEET
VTILQGIRPKYEAHHELSLSDEALYTAARLAAQYIPDLYLPGKAIDLL-DEAASRVWYY-
------------------------RQRQLVAHDA----------------------ASSA
EAPT--------------------------------------------------------
-------------TVVCGRDVAQVLAIQTGIPLAQLFSDGLNRIEDIEQILSQRVIGQAQ
AIRGVTKAIQRAFAGLKTKQDLIGALLFLGPSGVGKTELSKVLAEYLLGSNKALIRMDMS
EYAEAHSVSRLIGAPPGYIGYDQGGQ-L--SESVRRRPYS--VVLLDNIDYAHPDVINIF
IQILEEGSITDARG-RYVDFRNVLLLCTANVG--------TELFKRQTGLGFRAEL---P
EIDQVARYEHLKQQALDKIKTSLSLDFLHRLNDVILFQPLQAEHLEVLAGLFLQDV-RQM
-VLAHEIRLDLTSNAHTYLTDHGYDLERGVRRLRHLIQTHIVDPISNGLLHG--KYRAGD
ELLIDCDLS--------GNFTLLVAQRTTSVVA---------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_013928.1|c3|1861372-1863813|-|YP_003485685.1|class_III_stress_response-related_ATP-dependent
---------------------------------------MTDYSLKMQEVFRLAQFEAAR
FESSYLESWHVLLAMV-E-IDSSVAG---LSFAEFEADVRFEDYQAAAILAIGKKPKS-S
SNDIM-LLEQSHALKRTLAEAAAISQVT--HAKEVGTEHVLFAMLLN-P-----------
-NLLAT------------------------RILELVGFHAKDDGESIRLLDLRKVIERYA
GFSKEDIKAIFEMRKPKKVKN-----SSSFSDLMKPP-SVTGELADFTRDLTELARQGRL
E--PVIGREQEISRMVQILSRKTKNNPVLVGDAGVGKTALAYGLAQRIVD--SAVPFELA
D----MKVLELDMMSVVAGTRFRGDFEERMNQIIADIE-ADGHIVLFIDELHTIMGSG--
SGIDSTLDAANILKPALARGSLRTIGATTQEEYQKHIEKDAALSRRFAKVTIEEPSEEEA
YQILFGLKKSYETYHHVIISDAAVMAAVKGAHRYLSGKNLPDSAIDLL-DEASATV----
-----QGLVKKKAPAYLTDLDH------ALITND---YQLAKRLLKKEKKPLLKKR----
------------------------------------------------------------
-------------AEVKEEDILATLSKLSGIPVKKLTQADSKKYLNLERELHKRVIGQDD
AVSSISRAIRRNQSGIRVGKRPIGSFMFLGPTGVGKTELAKALAEVLFDDESALIRFDMS
EYMEKFAASRLNGAPPGYVGYEEGGE-L--TEKVRNKPYS--VLLFDEVEKAHPDIFNIL
LQVLDDGVLTDSRG-RKVDFSNTIIIMTSNLG--------ATALRDDKTVGFGAKSFSQD
YKA-------MESRILEELKKVYRPEFINRIDEKVVFHNLGQEDIRHVVKIMVAPL-IAH
-LADQGITLKFQPSALKHLALAGYDAEMGARPLRRTLQTEVEDKLAELILSR--KLASGQ
TLKIGI-----------QKEKLKFDIV---------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_006448.1|c1|86146-88596|+|YP_138621.1|ATP-dependent_Clp_protease,_ATP-binding_subunit
---------------------------------------MTIYSRKMQAIFHRAQLEAER
FESPFLETWHVLLAMV-E-VPGSVAY---LTFTDFEDRIHSEEIETAAVLAMEKRPKDLS
ESDIIDLRAQSPALEAMLQEAQGIASVT--GAVEVGSEHVLMAFLLH-K-----------
-DLMVC------------------------RLLEVAGFQYKDDSDKPRIIDLRRSLERNA
GLSKQDLKAIHDLRKPKKSKA-----SANFANMMQPPQSSTGELADYTKDLTALAESGNL
D--PIIGRDEEISRMIQVLSRKTKNNPVLVGEAGVGKTALALGLAQRIAS--GEVPFELA
D----MRILELDMMSVVAGTRFRGDFEERMNQIIDEIE-ADGKIILFIDELHTIIGSG--
SGIDSTLDAANILKPALARGTLHMVGATTQAEYQKHIEKDAALSRRFAKITIEEPSVSEA
IDILNGLRSSYEDYHRVTITDAAVETAVKAAHRYLTSKNLPDSAIDLL-DEASATVQVRI
KKE--AKREITPLDEAL--ISG--DIGAAVKQ-----YKANQK-AKFPKPALVDA-----
------------------------------------------------------------
------------------DQIMQTLSRLSGIPVEKMTQTDSKRYLNLESELHKRVIGQDE
AVSAISRAIRRNQSGIRTGKRPIGSFMFLGPTGVGKTELAKALAEVLFDDESALLRFDMS
EYMEKFAASRLNGAPPGYVGYDEGGE-L--TEKVRNKPYS--VLLFDEIEKAHPDIFNVL
LQVLDDGVLTDSRG-RKVDFSNTIIIMTSNLG--------ATALRDDKTVGFGAQTISHN
HQA-------MQARIMEELKKSYRPEFINRIDEKVVFHSLEEEQLHDIVKIMVKPL-ISA
-LADKGISLKFQPAALKHLAKDGYDIEMGARPLRRTIQTQVEDKLSELLLGG--QVVSGQ
TLKIGC-----------SKDKLTFTVV---------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_002758.2|c4|2691441-2693546|+|NP_373072.1|ATP-dependent_Clp_proteinase_chain
------------------------------------------------------------
MNNGFFNSD-----------FDSIFR---RMMQDMQ------------------------
------------------------------GSNQVGNKKYYIN-----G-----------
-KEVSP------------------------EELAQLTQQGS-------------------
NQSAEQSAQAFQQAAQRQQGQ-----QGGNGN----------YLEQIGRNLTQEARDGLL
D--PVIGRDKEIQETAEVLSRRTKNNPILVGEAGVGKTAIVEGLAQAIVE--GNVPAAIK
D----KEIISVDISSLEAGTQYRGAFEENIQKLIEGVK-SSQNAVLFFDEIHQIIGSGAT
GSDSGSKGLSDILKPALSRGEISIIGATTQDEYRNNILKDAALTRRFNEVLVNEPSAKDT
VEILKGIREKFEEHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVL-DITAAHLSAQ-
--S--PAVDKVETEKRISELEN--DKRKAVSAEE---YKKADD-IQNEIKSLQDKLENSN
GEHT--------------------------------------------------------
-------------AVATVHDISDTIQRLTGIPVSQMDDNDIERLKNISNRLRSKIIGQDQ
AVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKDALIRLDMS
EYSDTTAVSKMIGTTAGYVGYDDNSNTL--TEKVRRNPYS--VILFDEIEKANPQILTLL
LQVMDDGNLTDGQG-NVINFKNTIIICTSNAG--------FGNGNDA-------------
----------EEKDIMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDV-QVT
-LDKKGITMDVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKITDYYL----DHTDVK
HVDIDV-----------EDNELVVKGK---------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NZ_ACHD01000029.1|c1|29321-31426|-|ZP_04868184.1|ATP-dependent_Clp_proteinase_chain_clpL
------------------------------------------------------------
MNNGFFNSD-----------FDSIFR---RMMQDMQ------------------------
------------------------------GSNQVGNKKYYIN-----G-----------
-KEVSP------------------------EELAQLTQQGG-------------------
NHSAEQSAQAFQQAAQRQQGQ-----QGGNGN----------YLEQIGRNLTQEARDGLL
D--PVIGRDKEIQETAEVLSRRTKNNPILVGEAGVGKTAIVEGLAQAIVE--GNVPAAIK
D----KEIISVDISSLEAGTQYRGAFEENIQKLIEGVK-SSQNAVPFFDEIHQIIGSGAT
GSDSGSKGLSDILKPALSRGEISIIGATTQDEYRNNILKDAALTRRFNEVLVNEPSAKDT
VEILKGIREKFEEHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVL-DITAAHLSAQ-
--S--PAVDKVETEKRISELEN--DKRKAVSAEE---YKKADD-IQNEIKSLQDKLENSN
GEHT--------------------------------------------------------
-------------AVATVHDISDTIQRLTGIPVSQMDDNDIERLKNISNRLRSKIIGQDQ
AVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKDALIRLDMS
EYSDTTAVSKMIGTTAGYVGYDDNSNTL--TEKVRRNPYS--VILFDEIEKANPQILTLL
LQVMDDGNLTDGQG-NVINFKNTIIICTSNAG--------FGNGNDA-------------
----------EEKDIMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDV-QVT
-LDKKGITMDVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKITDYYL----DHTDVK
HVDIDV-----------EDNELVVKGK---------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_003923.1|c5|2630558-2632663|+|NP_647286.1|ATP-dependent_Clp_proteinase_chain_clpL
------------------------------------------------------------
MNNGFFNSD-----------FDSIFR---RMMQDMQ------------------------
------------------------------GSNQVGNKKYYIN-----G-----------
-KEVSP------------------------EELAQLTQQGG-------------------
NHSAEQSAQAFQQAAQRQQGQ-----QGGNGN----------YLEQIGRNLTQEARDGLL
D--PVIGRDKEIQETAEVLSRRTKNNPILVGEAGVGKTAIVEGLAQAIVE--GNVPAAIK
D----KEIISVDISSLEAGTQYRGAFEENIQKLIEGVK-SSQNAVLFFDEIHQIIGSGAT
GSDSGSKGLSDILKPALSRGEISIIGATTQDEYRNNILKDAALTRRFNEVLVNEPSAKDT
VEILKGIREKFEEHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVL-DITAAHLSAQ-
--S--PAVDKVETEKRISELEN--DKRKAVSAEE---YKKADD-IQNEIKSLQDKLENSN
GEHT--------------------------------------------------------
-------------AVATVHDISDTIQRLTGIPVSQMDDNDIERLKNISNRLRSKIIGQDQ
AVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKDALIRLDMS
EYSDTTAVSKMIGTTAGYVGYDDNSNTL--TEKVRRNPYS--VILFDEIEKANPQILTLL
LQVMDDGNLTDGQG-NVINFKNTIIICTSNAG--------FGNGNDA-------------
----------EEKDIMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDV-QVT
-LDKKGITMDVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKITDYYL----DHTDVK
HVDIDV-----------EDNELVVKGK---------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NZ_ACKI01000038.1|c1|53690-55798|-|ZP_05687789.1|ATP-dependent_proteinase_chain
------------------------------------------------------------
MNNNFFNSD-----------FDSILR---RMMQDMQ------------------------
------------------------------NSNQTSNKKYYIN-----G-----------
-KEVSP------------------------EELSQFTQQDD-------------------
NHSAEQSAQAFQQAALRQQGQ-----QSGNGN----------YLEQIGRNLTQEARDRLL
D--PVIGRDKEIQETAEVLSRRTKNNPILVGEAGVGKTAIVEGLAQAIVE--GNVPAAIK
D----KEIISIDISSLEAGTQYRGAFEENIQKLVEGVK-SSQNAVLFFDEIHQIIGSGAT
GSDSGSKGLSDILKPALSRGEISIIGATTQDEYRNNIMKDAALTRRFNEVLVNEPSAKDT
VEILKGIREKFETHHQVKLPNDVLKACVDLSIQYIPQRLLPDKAIDVL-DITAAHLSAQ-
--S--PAVDKVETEKRISELEN--DKRKAVSAEE---YKKADD-IQNEIKSLQDKLENSN
GEHT--------------------------------------------------------
-------------AVATVHDISDTIQRLTGIPVSQMDDNDIERLKNISNRLRSKIIGQDQ
AVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKEALIRLDMS
EYSDTTAVSKMIGTTAGYVGYDDNSNTL--TEKVRRNPYS--VILFDEIEKANPQILTLL
LQVMDDGNLTDGQG-NVINFKNTIVICTSNAG--------FGNGTDQ-------------
----------EYDDIMQEMKKFFRPEFLNRFNGIVEFLHLDKESLQEIINLLLDDV-QVT
-LDKKGITMNVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRNKITDYYL----DHTDVK
HVDLDI-----------EDNELVVKGKS--------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_002952.2|c4|2712877-2714982|+|YP_041973.1|putative_ATP-dependent_protease_ATP-binding
------------------------------------------------------------
MNNNFFNSD-----------FDSILR---RMMQDMQ------------------------
------------------------------NSNQTSNKKYYIN-----G-----------
-KEVSP------------------------EELAQFTQQGG-------------------
NHSAEQSAQAFQQAALRQQGQ-----QSGNGN----------YLEQIGRNLTQEARDGLL
D--PVIGRDKEIQETAEVLSRRTKNNPILVGEAGVGKTAIVEGLAQAIVE--GNVPAAIK
D----KEIISIDISSLEAGTQYRGAFEENIQKLVEGVK-SSQNAVLFFDEIHQIIGSGAT
GSDSGSKGLSDILKPALSRGEISIIGATTQDEYRNNIMKDAALTRRFNEVLVNEPSAKDT
VEILKGIREKFETHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVL-DITAAHLSAQ-
--S--PAIDKVTTEKRISELEH--DKRKAVSAEE---YKKADD-IQKEIKSLQDKLENSN
GEHT--------------------------------------------------------
-------------AVATVHDISDTIQRLTGIPVSQMDANDIERLKNISSRLRSKIIGQDK
AVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKEALIRLDMS
EYSDTTAVSKMIGTTAGYVGYDDNSNTL--TEKVRRNPYS--VILFDEIEKANPQILTLL
LQVMDDGNLTDGQG-NVINFKNTIIICTSNAG--------FGNGNDT-------------
----------EEKDIMHEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDV-QVT
-LDKKGITMDVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKITDYYL----DHTDVK
HVDIDV-----------EDNELVVKGK---------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_007622.1|c5|2558644-2560752|+|YP_417872.1|ATP-dependent_proteinase_chain
------------------------------------------------------------
MNNNFFNSD-----------FDSILR---RMMQDMQ------------------------
------------------------------NSNQTSNKKYYIN-----G-----------
-KEVSQ------------------------EELAQFTQQGG-------------------
NHSAEQSAQAFQQAALRQQGQ-----QSGNGN----------YLEQIGRNLTQEARDGLL
D--PVIGRDKEIQETAEVLSRRTKNNPILVGEAGVGKTAIVEGLAQAIVE--GNVPAAIK
D----KEIISIDISSLEAGTQYRGAFEENIQKLVEGVK-SSQNAVLFFDEIHQIIGSGAT
GSDSGSKGLSDILKPALSRGEISIIGATTQDEYRNNILKDAALTRRFNEVLVNEPSAKDT
VEILKGIREKFETHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVL-DITAAHLSAQ-
--S--PAIDKVATEKRISELEH--DKRKAVSAEE---YKKADD-IQNEIKSLQDKLENSN
GEHT--------------------------------------------------------
-------------AVATVHDISDTIQRLTGIPVSQMDANDIERLKNISSRLRSKIIGQDK
AVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKEALIRLDMS
EYSDTTAISKMIGTTAGYVGYDDNSNTL--TEKVRRNPYS--VILFDEIEKANPQILTLL
LQVMDDGNLTDGQG-NVINFKNTIIICTSNAG--------FGNGTDQ-------------
----------EYDDIMQEMKKFFRPEFLNRFNGIVEFLHLDKDALQDIVNLLLDDV-QVT
-LDKKGITMNVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKITDYYL----DHTDVK
HVDLDI-----------EDNELVVKGKS--------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NZ_GG730183.1|c1|184501-186609|+|ZP_06325649.1|ATP-dependent_Clp_protease_ATP-binding_subunit
------------------------------------------------------------
MNNNFFNSD-----------FDSILR---RMMQDMQ------------------------
------------------------------NSNQTSNKKYYIN-----G-----------
-KEVSP------------------------EELAQFTQQGD-------------------
NHSAEQSAQAFQQAALRQQGQ-----QSGNGN----------YLEQIGRNLTQEARDGLL
D--PVIGRDKEIQETAEVLSRRTKNNPILVGEAGVGKTAIVEGLAQAIVE--GNVPAAIK
D----KEIISIDISSLEAGTQYRGAFEENIQKLVEGVK-SSQNAVLFFDEIHQIIGSNAT
GSDSGSKGLSDILKPALSRGEISIIGATTQDEYRNNIMKDAALTRRFNEVLVNEPSARDT
VEILKGIREKFETHHQVKLPDDVLKACVDLSIQYIPQRLLPDKAIDVL-DITAAHLSAQ-
--S--PAIDKVATEKRISELEH--DKRKAVSAEE---YKKADD-IQNEIKSLQDKLENSN
GEHT--------------------------------------------------------
-------------AVATVHDISDTIQRLTGIPVSQMDANDIERLKNISSRLRSKIIGQDK
AVEMVSRAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAIDLFGNKEALIRLDMS
EYSDTTAVSKMIGTTAGYVGYDDNSNTL--TEKVRRNPYS--VILFDEIEKANPQILTLL
LQVMDDGNLTDGQG-NVINFKNTIIICTSNAG--------FGNGTDQ-------------
----------EYDDIMQEMKKFFRPEFLNRFNGIVEFLHLDKESLQEIINLLLDDV-QVT
-LDKKGITMNVSQDAKDWLIEEGYDEELGARPLRRIVEQQVRDKITDYYL----DHTDVK
HVDLDI-----------EDNELVVKGKS--------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_012004.1|c1|755040-757142|-|YP_002562115.1|ATP-dependent_protease_ATP-binding_subunit_ClpL
------------------------------------------------------------
-MTNNFGRDPF------G-QMDDIFN---QLMGDM-------------------------
------------------------------SNFNKSQQRYHVN-----G-----------
-VEMTP------------------------EQFNSYRKSGQ-------------------
FPGENAPQPLSHQEQPASEGN---------------------LLTKLGTNLTEQARQGEL
D--PVIGRNKEIQDTAEILSRRTKNNPVLVGEAGVGKTAVIEGLAQAIVC--GDVPASIK
N----KDIISIDISSLEAGTQYRGSFEENIQQLVNEVK-AAGNIILFFDEIHQILGAGST
GGDSGSKGLADILKPALSRGELTVIGATTQDEYRNTILKNAALARRFNEVKINAPSAEDT
FHILLGLRHLYEKHHNVDLPDSVLKAAIDYSIQYIPQRSLPDKAIDLV-DMTAAHLAAQ-
--H--PVTNLKALEQEMENEKV--KQEKAVASED---FEAALK-SKTRIEELKQHMSDHQ
VGQR--------------------------------------------------------
-------------VSATINDIAQSVERLTGIPVSKMGNSDLERLKEMDSRLKQHVIGQNQ
AVEAVARAIRRNRAGFDDGHRPIGSFLFVGPTGVGKTELAKQLALDMFGSKEAIIRLDMS
EYSDRTAVSKLIGTTAGYVGYDDNNNTL--TERVRRNPYA--IILLDEIEKADDQVITLL
LQVLDDGRLTDGQG-NTINFKNTVIIATSNAG--------FGYPNQTDD-----------
----------AKVTLMDRLKPYFRPEFLNRFNALIEFKSLAKEDLKEIVDLMLADV-NKT
-IVKKGMTLEVTDEVKEKLMVLGYDPTMGVRPLRRIIEQEIRDKMTDFYL----DHSEEK
HLKASI-----------INDDIIITAKN--------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_012891.1|c2|839402-841501|-|YP_002996564.1|ATP-dependentprotease_ATP-binding_subunit
------------------------------------------------------------
-MTNYYDKDTF------G-NMDDIFN---QLMGNM-------------------------
------------------------------GGYRSENRRYLVN-----G-----------
-REMTP------------------------EEFQAYRQTGR-------------------
LSDKGSEQPTSQGHQTKKDG----------------------ILAKLGTNLTEEARQGKL
D--PVIGRNHEIQDTAEILARRTKNNPVLVGDAGVGKTAVVEGLAQAIVN--GDVPAAIK
N----KEIISIDISGLEAGTKYRGSFEENIQNMIQEVK-EAGNIILFFDEIHQILGAGST
GGDSGSKGLADMLKPALSRGELTLIGATTQDEYRNTILKNAALARRFNEVKVNAPSAEDT
FHILMGIRNLYEQHHNVILPDAVLKAAIDYSIQYIPQRSLPDKAIDLV-DMTAAHLAAQ-
--H--PVTDLKSLEAEMTTQKN--IQEEAVAKED---FERALT-AKTRIEELQKQMDNHS
EDQK--------------------------------------------------------
-------------VTATVNDIAESVERLTGVPVSNMGASDLERLKEISNRLKGHVIGQDG
AVEAVARAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDLFGSKEAIIRLDMS
EYSDRTAVSKLIGTTAGYVGYDDNNNTL--TERVRRNPYA--IVLLDEIEKADPQVITLL
LQVLDDGRLTDGQG-NTINFKNTVIIATSNAG--------FGHQEDENT-----------
----------DQPTIMDRIAPYFRPEFLNRFNGVIEFNHLQKEDLEEIVDLMLAEV-NQT
-IAKKGISLAISDDAKAHLIELGYDHAMGVRPLRRVIEQEIRDRITDFYL----DHPEVK
NLQASL-----------EQGQLVIHDKN--------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_008024.1|c1|758735-760834|-|YP_602280.1|ATP-dependent_endopeptidase_clp_ATP-binding
------------------------------------------------------------
-MTHFSGKDPF------V-NMDDIFN---QLMANM-------------------------
------------------------------GGYRSENPRYLVN-----G-----------
-REITP------------------------EEFQHYRQTGQ-------------------
LPVA-TTKATNSQMLTPKADS---------------------VLTQLGTNLTQEARQGHL
D--PVIGRNKEIQDTAEILARRTKNNPVLVGDAGVGKTAVIEGLAQAIVN--GDVPAAIK
N----KEIVSIDISSLEAGTQYRGSFEETIQNLIQEVK-EAGNIILFFDEIHQIVGAGAT
SSDSGSKGLADILKPALSRGELTLIGATTQDEYRNTILKNAALARRFNEVKVNAPSAEDT
FHILMGIRNLYEQHHHITLPDNVLKAAVDYSIQYIPQRSLPDKAIDLL-DMTAAHLAAQ-
--H--PVTDLKTLETEIAKQKE--RQEKAVAKED---FEKALA-AKTRIETLQKQIEQHN
QTQN--------------------------------------------------------
-------------VTATVNDIAESVERLTGIPVSNMGTNDLERLKGISSRLKSHVIGQDE
AVAAVARAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDLFGSKDAIIRLDMS
EYNDRTAVSKLIGTTAGYVGYDDNNNTL--TERVRRNPYA--IVLLDEIEKADPQIITLL
LQVLDDGRLTDGQG-NTINFKNTVIIATSNAG--------FGQQDTET------------
----------SGFNIMDRIAPYFRPEFLNRFNSIIKFNHLQKENLEEIVDLMLAEV-NQT
-TAKKGISLTIADDAKAHLIDLGYNRAMGARPLRRIIEQEIRDRITDYYL----DHPEVK
KLQAIL-----------KEGQLVIRQNDQ-------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_007296.1|c1|694019-696118|-|YP_280142.1|ATP-dependent_protease_ATP-binding_subunit
------------------------------------------------------------
-MTHFSGKDPF------V-NMDDIFN---QLMANM-------------------------
------------------------------GGYRSENPRYLVN-----G-----------
-REITP------------------------EEFQHYRQTGQ-------------------
LPVA-TTKATTSQMLTPKADS---------------------VLTQLGTNLTQEARQGHL
D--PVIGRNKEIQDTAEILARRTKNNPVLVGDAGVGKTAVIEGLAQAIVN--GDVPAAIK
N----KEIVSIDISSLEAGTQYRGSFEETIQNLIQEVK-EAGNIILFFDEIHQIVGAGAT
SSDSGSKGLADILKPALSRGELTLIGATTQDEYRNTILKNAALARRFNEVKVNAPSAEDT
FHILMGIRNLYEQHHHITLPDNVLKAAVDYSIQYIPQRSLPDKAIDLL-DMTAAHLAAQ-
--H--PVTDLKTLETEIAKQKE--RQEKAVAKED---FEKALA-AKTRIETLQKQIEQHN
QSQN--------------------------------------------------------
-------------VTATVNDIAESVERLTGIPVSNMGTNDLERLKGISSRLKSHVIGQDE
AVAAVARAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDLFGSKDAIIRLDMS
EYNDRTAVSKLIGTTAGYVGYDDNNNTL--TERVRRNPYA--IVLLDEIEKADPQIITLL
LQVLDDGRLTDGQG-NTINFKNTVIIATSNAG--------FGQQDTET------------
----------SGFNIMDRIAPYFRPEFLNRFNSIIKFNHLQKENLEEIVDLMLAEV-NQT
-TAKKGISLTIADDAKAHLIDLGYNHAMGARPLRRIIEQEIRDRITDYYL----DHPEVK
KLQAIL-----------EEGQLVIRQKDQ-------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_008022.1|c1|728109-730208|-|YP_598361.1|ATP-dependent_endopeptidase_Clp_ATP-binding
------------------------------------------------------------
-MTHFSGKDPF------I-NMDDIFN---QLMANM-------------------------
------------------------------GGYRSENPRYLVN-----G-----------
-REITP------------------------EEFQHYRQTGQ-------------------
LPVA-TTKATNSQMLTPKADS---------------------VLTQLGTNLTQEARQGHL
D--PVIGRNKEIQDTAEILARRTKNNPVLVGDAGVGKTAVIEGLAQAIVN--GDVPAAIK
N----KEIVSIDISSLEAGTQYRGSFEETIQNLIQEVK-EAGNIILFFDEIHQIVGAGAT
SSDSGSKGLADILKPALSRGELTLIGATTQDEYRNTILKNAALARRFNEVKVNAPSAEDT
FHILMGIRNLYEQHHHIILPDNVLKAAVDYSIQYIPQRSLPDKAIDLL-DMTAAHLAAQ-
--H--PVTDLKTLETEIAKQKE--SQEKAVAKED---FEKALA-AKTRIETLQKQIEQHN
QSQN--------------------------------------------------------
-------------VTATVNDIAESVERLTGIPVSNMGTNDLERLKGISSRLKSHVIGQDE
AVAAVARAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDLFGSKDAIIRLDMS
EYNDRTAVSKLIGTTAGYVGYDDNNNTL--TERVRRNPYA--IVLLDEIEKADPQIITLL
LQVLDDGRLTDGQG-NTINFKNTVIIATSNAG--------FGQQDTET------------
----------SESNIMDRIAPYFRPEFLNRFNSIIKFNHLQKENLEEIVDLMLAEV-NQT
-TAKKGISLTIADDAKAHLIDLGYNHAMGARPLRRIIEQEIRDRITDYYL----DHPDVK
KLQAIL-----------KEGQLVIRQNDQ-------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NZ_AAFV01000003.1|c1|50-2149|+|ZP_00366605.1|COG0542:_ATPases_with_chaperone_activity,
------------------------------------------------------------
-MTHFSGKDPF------V-NMDDIFN---QLMANM-------------------------
------------------------------GGYRSENPRYLVN-----G-----------
-REITP------------------------EEFQHYRQTGQ-------------------
LPVA-TTKATNSQMLTPKADS---------------------VLTQLGTNLTQEARQGHL
D--PVIGRNKEIQDTAEILARRTKNNPVLVGDAGVGKTAVIEGLAQAIVN--GDVPAAIK
N----KEIVSIDISSLEAGTQYRGSFEETIQNLIQEVK-EAGNIILFFDEIHQIVGAGAT
SSDSGSKGLADILKPALSRGELTLIGATTQDEYRNTILKNAALARRFNEVKVNAPSAEDT
FHILMGIRNLYEQHHHITLPDNVLKAAVDYSIQYIPQRSLPDKAIDLL-DMTAAHLAAQ-
--H--PVTDLKTLETEIAKQKE--RQEKAVAKED---FEKALA-AKTRIETLQKQIEQHN
QSQN--------------------------------------------------------
-------------VTATVNDIAESVERLTGIPVSNLGTNDLERLKGISSRLKSHVIGQDE
AVAAVARAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDLFGSKDAIIRLDMS
EYNDRTAVSKLIGTTAGYVGYDDNNNTL--TERVRRNPYA--IVLLDEIEKADPQIITLL
LQVLDDGRLTDGQG-NTINFKNTVIIATSNAG--------FGQQDTET------------
----------SESNIMDRIAPYFRPEFLNRFNSIIKFNHLQKENLEEIVDLMLAEV-NQT
-TAKKGISLTIADDAKAHLIDLGYNHAMGARPLRRIIEQEIRDRITDYYL----DHPEVK
KLQAIL-----------KEGQLVIRQKDQ-------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_002737.1|c1|734764-736863|-|NP_269087.1|putative_ATP-dependent_Clp_proteinase
------------------------------------------------------------
-MTHFSGKDPF------V-NMDDIFN---QLMANM-------------------------
------------------------------GGYRSENPRYLVN-----G-----------
-REITP------------------------EEFQHYRQTGQ-------------------
LPVA-TTKATNSQMLTPKADS---------------------VLTQLGTNLTQEARQGHL
D--PVIGRNKEIQDTAEILARRTKNNPVLVGDAGVGKTAVIEGLAQAIVN--GDVPAAIK
N----KEIVSIDISSLEAGTQYRGSFEETIQNLIQEVK-EAGNIILFFDEIHQIVGAGAT
SSDSGSKGLADILKPALSRGELTLIGATTQDEYRNTILKNAALARRFNEVKVNAPSAEDT
FHILMGIRNLYEQHHHITLPDNVLKAAVDYSIQYIPQRSLPDKAIDLL-DMTAAHLAAQ-
--H--PVTDLKTLETEIAKQKE--SQEKAVAKED---FEKALA-AKTRIETLQKQIEQHN
QSQN--------------------------------------------------------
-------------VTATVNDIAESVERLTGIPVSNMGTNDLERLKGISSRLKSHVIGQDE
AVAAVARAIRRNRAGFDDGKRPIGSFLFVGPTGVGKTELAKQLALDLFGSKDAIIRLDMS
EYNDRTAVSKLIGTTAGYVGYDDNNNTL--TERVRRNPYA--IVLLDEIEKADPQIITLL
LQVLDDGRLTDGQG-NTINFKNTVIIATSNAG--------FGQQDTET------------
----------SESNIMDRIAPYFRPEFLNRFNSIIKFNHLQKESLEEIVDLMLAEV-NQT
-TAKKGISLTITDDAKAHLIDLGYNHAMGARPLRRIIEQEIRDRITDYYL----DHPEVK
KLQAIL-----------KEGQLVIRQNDQ-------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_008021.1|c1|734377-736476|-|YP_596482.1|ATP-dependent_endopeptidase_Clp_ATP-binding
------------------------------------------------------------
-MTHFSGKDPF------V-NMDDIFN---QLMANM-------------------------
------------------------------GGYRSENPRYLVN-----G-----------
-REITP------------------------EEFQHYRQTGQ-------------------
LPVA-TTKATNSQMLTPKADS---------------------VLTQLGTNLTQEARQGHL
D--PVIGRNKEIQDTAEILARRTKNNPVLVGDAGVGKTAVIEGLAQAIVN--GDVPAAIK
N----KEIVSIDISSLEAGTQYRGSFEETIQNLIQEVK-EAGNIILFFDEIHQIVGAGAT
SSDSGSKGLADILKPALSRGELTLIGATTQDEYRNTILKNAALARRFNEVKVNAPSAEDT
FHILMGIRNLYEQHHHITLPDNVLKAAVDYSIQYIPHRSLPDKAIDLL-DMTAAHLAAQ-
--H--PVTDLKTLETEIAKQKE--SQEKAVAKED---FEKALA-AKTRIETLQKQIEQHN
QSQN--------------------------------------------------------
-------------VTATVNDIAESVERLTGIPVSNMGTNDLERLKGISSRLKSHVIGQDE
AVAAVARAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDLFGSKDAIIRLDMS
EYNDRTAVSKLIGTTAGYVGYDDNNNTL--TERVRRNPYA--IVLLDEIEKADPQIITLL
LQVLDDGRLTDGQG-NTINFKNTVIIATSNAG--------FGQQDTET------------
----------SGSNIMDRIAPYFRPEFLNRFNSIIKFNHLQKENLEEIVDLMLAEV-NQT
-TAKKGISLTIADDAKAHLIDLGYNHAMGARPLRRIIEQEIRDRITDYYL----DHPEVK
KLQAIL-----------KEGQLVIRQKDQ-------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_003485.1|c1|775737-777836|-|NP_607092.1|putative_ATP-dependent_Clp_proteinase
------------------------------------------------------------
-MTHFSGKDPF------V-NMDDIFN---QLMANM-------------------------
------------------------------GGYRSENPRYLVN-----G-----------
-REITP------------------------EEFQHYRQTGQ-------------------
LPVA-TTKATNSQMLTPKADS---------------------VLTQLGTNLTQEAHQGHL
D--PVIGRNKEIQDTAEILARRTKNNPVLVGDAGVGKTAVIEGLAQAIVN--GDVPAAIK
N----KEIVSIDISSLEAGTQYRGSFEETIQNLIQEVK-EAGNIILFFDEIHQIVGAGAT
SSDSGSKGLADILKPALSRGELTLIGATTQDEYRNTILKNAALARRFNEVKVNAPSAEDT
FHILMGIRNLYEQHHHITLPDNVLKAAVDYSIQYIPQRSLPDKAIDLL-DMTAAHLAAQ-
--H--PVTDLKTLETEIAKQKE--SQEKAVAKED---FEKALA-AKTRIETLQKQIEQHN
QSQN--------------------------------------------------------
-------------VTATVNDIAESVERLTGIPVSNMGTNDLERLKGISSRLKSHVIGQDE
AVAAVARAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDLFGSKDAIIRLDMS
EYNDRTAVSKLIGTTAGYVGYDDNNNTL--TERVRRNPYA--IVLLDEIEKADPQIITLL
LQVLDDGRLTDGQG-NTINFKNTVIIATSNAG--------FGQQDTET------------
----------SESNIMDRIAPYFRPEFLNRFNSIIKFNHLQKENLEEIVDLMLAEV-NQT
-TAKKGISLTIADDAKAHLIDLGYNHAMGARPLRRIIEQEIRDRITDYYL----DHPEVK
KLQAIL-----------KEGQLVIRQNDQ-------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_006086.1|c1|713132-715231|-|YP_060029.1|ATP-dependent_protease_ATP-binding_subunit
------------------------------------------------------------
-MTHFSGKDPF------V-NMDDIFN---QLMANM-------------------------
------------------------------GGYRSENPRYLVN-----G-----------
-REITP------------------------EEFQHYRQTGQ-------------------
LPVA-TTKATNSQMLTPKADS---------------------VLTQLGTNLTQEARQGHL
D--PVIGRNKEIQDTAEILARRTKNNPVLVGDAGVGKTAVIEGLAQAIVN--GDVPAAIK
N----KEIVSIDISSLEAGTQYRGSFEETIQNLIQEVK-EAGNIILFFDEIHQIVGAGAT
SSDSGSKGLADILKPALSRGELTLIGATTQDEYRNTILKNAALARRFNEVKVNAPSAEDT
FHILMGIRNLYEQHHHITLPDNVLKAAVDYSIQYIPQRSLPDKAIDLL-DMTAAHLAAQ-
--H--PVTDLKTLETEIAKQKE--SQEKAVAKED---FEKALA-AKTRIETLQKQIEQHN
QSQN--------------------------------------------------------
-------------VTATVNDIAESVERLTGIPVSNMRTNDLERLKGISSRLKSHVIGQDE
AVAAVARAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDLFGSKDAIIRLDMS
EYNDRTAVSKLIGTTAGYVGYDDNNNTL--TERVRRNPYA--IVLLDEIEKADPQIITLL
LQVLDDGRLTDGQG-NTINFKNTVIIATSNAG--------FGQQDTET------------
----------SESNIMDRIAPYFRPEFLNRFNSIIKFNHLQKENLEEIVDLMLAEV-NQT
-TAKKGISLTIADDAKAHLIDLGYNHAMGARPLRRIIEQEIRDRITDYYL----DHPEVK
KLQAIL-----------KEGQLVIRQNDQ-------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_009332.1|c1|1112602-1114701|+|YP_001128663.1|putative_ATP-dependent_protease_ATP-binding
------------------------------------------------------------
-MTHFSGKDPF------V-NMDDIFN---QLMANM-------------------------
------------------------------GGYRSENPRYLVN-----G-----------
-REITP------------------------EEFQHYRQTGQ-------------------
LPVA-TTKATNSQMLTPKADS---------------------VLTQLGTNLTQEARQGHL
D--PVIGRNKEIQDTAEILARRTKNNPVLVGDAGVGKTAVIEGLAQAIVN--GDVPAAIK
N----KEIVSIDISSLEAGTQYRGSFEETIQNLIQEVK-EAGNIILFFDEIHQIVGAGAT
SSDSGSKGLADILKPALSRGELTLIGATTQDEYRNTILKNAALARRFNEVKVNAPSAEDT
FHILMGIRNLYEQHHHITLPDNVLKAAVDYSIQYIPQRSLPDKAIDLL-DMTAAHLAAQ-
--H--PVTDLKTLETEIAKQKE--SQEKAVAKED---FEKALA-AKTRIETLQKQIEQHN
QSQN--------------------------------------------------------
-------------VTATVNDIAESVERLTGIPVSNMGTNDLERLKGISSRLKSHVIGQDE
AVAAVARAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDLFGSKDAIIRLDMS
EYNDRTAVSKLIGTTAGYVGYDDNNNTL--TERVRRNPYA--IVLLDEIEKADPQIITLL
LQVLDDGRLTDGQG-NTINFKNTVIIATSNAG--------FGQQDTET------------
----------SESNIMDRIAPYFRPEFLNRFNSIIKFNHLQKENLEEIVDLMLAEV-NQT
-TAKKGISLTIADDAKAHLIDLGYNHAMGARPLRRIIEQEIRDRITDYYL----DHPEVK
KLQAIL-----------KEGQLVIRQNDQ-------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NZ_ABJK02000012.1|c1|77680-79788|-|ZP_02919516.1|hypothetical_protein
-----------------------------------------------------------M
ANNQFYGRDPF------G-NMDDIFN---QLMGNM-------------------------
------------------------------GGYNSENRRYLIN-----G-----------
-REVTP------------------------EEFAQYRQTGK-------------------
FPGNADYQEGAPTSAPKEDG----------------------ILAKLGTNLTERARNNEL
D--PVIGRNKEIQETAEILSRRTKNNPVLVGDAGVGKTAVVEGLAQAIVN--GDVPAAIK
N----KEIISIDISGLEAGTQYRGSFEENIQNLVNEVK-EAGNIILFFDEIHQILGAGST
GDGQGSKGLADILKPALSRGEITVIGATTQDEYRNTILKNAALARRFNEVKVNAPSPEDT
FKILQGIRDLYEKHHNVILPDEVLKAAVDFSVQYIPQRSLPDKAIDLL-DVTAAHLAAQ-
--H--PVTDVKSLEKEIAEQKE--KQEAAAAKED---YEAALN-AKVRIEELQKQIDNHT
EDKK--------------------------------------------------------
-------------VTATVNDVAESVERMTGIPVSQMGATDIERLKDMGNRLQAKVIGQDK
AVEAVARSIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLALDLFGTKDAIIRLDMS
EYSDRTAVSKLIGTTAGYVGYDDNNNTL--TERVRRNPYS--IILLDEIEKADPQVITLL
LQVLDDGRLTDGQG-NTVNFKNTVIIATSNAG--------FGYESNWTEDD---------
----------DKPELMDRLKPYFRPEFLNRFDAVIEFSHLDKEDLSKIVDLMLNEV-NKT
-LSKKGIELSVSEAAKAYMTEEGYDEVMGARPLRRVVEQQIRDKVTDFHL----DNLDAK
HLKADM-----------VDGELVISEK---------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_004350.1|c1|905494-907599|-|NP_721354.1|putative_Clp-like_ATP-dependent_protease,
------------------------------------------------------------
-MANFNGRDPF------G-NMDDIFN---QLMGNM-------------------------
------------------------------GGYNSENRRYLIN-----G-----------
-REVSP------------------------EEFAQYRQTGK-------------------
LPGNPEIQQAQAAARTPKEDS---------------------ILTKLGNNLTEEARQGNL
D--PVIGRNKEIQETAEILARRTKNNPVLVGDAGVGKTAVVEGLAQAIVN--GDVPASIK
N----KEVISIDISGLEAGTQYRGAFEENIQNLVKEVK-EAGNIILFFDEIHQILGAGST
GGDSGSKGLADIIKPALSRGELTVIGATTQDEYRNTIMKNAALARRFNEVKVNAPSAEDT
YEILKGISALYEQHHNVILPKEVLKAAVDLSVQYIPQRSLPDKAIDLV-DMTAAHLAAQ-
--H--PATDVKTLEKEIQTEKD--KQQAAAEKED---YEEALK-SKTKIDKLQAQIDNHT
EGQK--------------------------------------------------------
-------------VTATINDVAEAVERLTGIPVSQMGSSDIERLKEMNSRLKGKVIGQDE
AVEAVSRAIRRNRAGFDEGNRPIGSFLFVGPTGVGKTELAKQLALDMFGSKDSIIRLDMS
EYSDRTAVSKLIGTTAGYVGYDDNSNTL--TERVRRNPYS--IVLLDEIEKADSQVITLL
LQVLDDGRLTDGQG-NTINFKNTVIIATSNAG--------FGNEALTGQED---------
----------KDMKIMDRIAPYFRPEFLNRFNAVIEFSHLSKEDLDEIVNLMLSEV-NTT
-LAKKGIDLVVSDSAKAHLIEEGYDEAMGVRPLRRVIEQEIRDKVTDFYL----DHTDVK
HLKAEM-----------QDDKLIIEEA---------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_004116.1|c1|1312759-1314867|+|NP_688301.1|ATP-dependent_Clp_protease,_ATP-binding_subunit
-----------------------------------------------------------M
ANNNFYNRDPF------G-NMDDIFN---SLMGNM-------------------------
------------------------------GGYNSENKRYLIN-----G-----------
-REVTP------------------------EEFSQYRQTGK-------------------
LPGQE-LNNQNTPTNQVSADS---------------------VLTKLGTNLTDQARQHLL
D--PVIGRNKEIQETAEILARRTKNNPVLVGDAGVGKTAVIEGLAQAIIN--GDVPAAIK
N----KEIISIDISSLEAGTQYRGSFEENIQNIIKEVK-ETGNIILFFDEIHQILGAGST
GGDSGSKGLADILKPALSRGELTVIGATTQDEYRNTILKNAALARRFNEVKVNAPSAQDT
FNILMGIRNLYEQHHNVVLPDSVLKAAVDLSIQYIPQRSLPDKAIDLI-DMTAAHLAAQ-
--H--PVTDLKSLEKEIAEQRD--KQEKAVNTED---FEEALK-VKTRIEELQNQIDNHT
EGQK--------------------------------------------------------
-------------VTATINDIAMSIERLTGVPVSNMGASDIERLKELGNRLKGKVIGQND
AVEAVARAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAFDMFGSKDAIVRLDMS
EYNDRTAVSKLIGATAGYVGYDDNSNTL--TERIRRNPYS--IVLLDEIEKADPQVITLL
LQVLDDGRLTDGQG-NTINFKNTVIIATSNAG--------FGNEAFTGDSD---------
----------KDLKIMERISPYFRPEFLNRFNGVIEFSHLSKDDLSEIVDLMLDEV-NQT
-IGKKGIDLVVDENVKSHLIELGYDEAMGVRPLRRVIEQEIRDRITDYYL----DHTDVK
HLKANL-----------QDGQIVISER---------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_004368.1|c1|1424900-1427008|+|NP_735813.1|hypothetical_protein
-----------------------------------------------------------M
ANNNFYNRDPF------G-NMDDIFN---SLMGNM-------------------------
------------------------------GGYNSENKRYLIN-----G-----------
-REVTP------------------------EEFSQYRQTGK-------------------
LPGQE-LNNQNTPTNQVSADS---------------------VLTKLGTNLTDQARQHLL
D--PVIGRNKEIQETAEILARRTKNNPVLVGDAGVGKTAVIEGLAQAIIN--GDVPAAIK
N----KEIISIDISSLEAGTQYRGSFEENIQNIIKEVK-ETGNIILFFDEIHQILGAGST
GGDSGSKGLADILKPALSRGELTVIGATTQDEYRNTILKNAALARRFNEVKVNAPSAQDT
FNILMGIRNLYEQHHNVVLPDSVLKAAVDLSIQYIPQRSLPDKAIDLI-DMTAAHLAAQ-
--H--PVTDLKSLEKEIAAQRD--KQEKAVNTED---FEEALK-VKTRIEELQNQIDNHT
EGQK--------------------------------------------------------
-------------VTATINDIAMSIERLTGVPVSNMGASDIERLKELGNRLKGKVIGQND
AVEAVARAIRRNRAGFDDGNRPIGSFLFVGPTGVGKTELAKQLAFDMFGSKDAIVRLDMS
EYNDRTAVSKLIGATAGYVGYDDNSNTL--TERIRRNPYS--IVLLDEIEKADPQVITLL
LQVLDDGRLTDGQG-NTINFKNTVIIATSNAG--------FGNEAFTGDSD---------
----------KDLKIMERISPYFRPEFLNRFNGVIEFSHLSKDDLNEIVDLMLDEV-NQT
-IGKKGIDLVVDENVKSHLIDLGYDEAMGVRPLRRVIEQEIRDRITDYYL----DHTDVK
HLKANL-----------QDGQIVISER---------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_010080.1|c1|663314-665503|-|YP_001577121.1|ATP-dependent_Clp_protease,_ATP-binding_subunit
--------------------------------------------------------MLCQ
NCYKRPASIHLFTKVNGQSREIDLCQ---QCYQEL-------------------------
------------------------------KNQQGNLENMNNN-----------------
-NEFFG------------------------DFDDLFNALNG-------------------
NNNNAANNNMNENNPRMQMGG-----GNGNGNHGGKS-----LLDQYGTDLTALAKKGKI
D--PVIGRDKEIARVIEILNRRTKNNPVLIGEAGVGKTAVVEGLAQEIVD--GSVPAKLQ
N----KRIISLNVVSLVQGTGIRGQFEQRMEQLIKELQ-QNDDIILFIDEIHEIVGAG--
-NAEGGMDAGNIIKPALARGELQLVGATTIKEYRD-IEKDSALARRFQPVEVKEPPIDET
IRILKGIQQRYEDYHHVHYTDDAIEAAAKLSARYIQDRFLPDKAIDLL-DEAGSRMNLT-
--I--PYIDKDKMQERINAAEQ--LKKEALKNED---YEKAAY-YRDQIEKYEKVKDQKV
DPDKS-------------------------------------------------------
-------------PVITNKIMNKIVEEKTGIPVGDIQKQEENQLRNLANDLKAHVIGQDK
AVEKVARAIRRNRIGFNKSGRPIGSFLFVGPTGVGKTELAKQLAKQMFGSENAMIRFDMS
EYMEQYSVSKLIGSAPGYVGYEEAGQ-L--TEQVRHNPYS--LILLDEIEKAHPDVLNLF
LQILDDGRLTDSQG-RTVSFKDTIIIMTSNAG--------QGIKNASVGFTAENETE---
----------SKESARNNMSQFFKPEFLNRLDDVIEFNELTKPDLLKIVDLMLKNT-NDM
-VKDQGLHIDVIQAAKDKLVEEGFNPALGARPLRRTIQEEIEDNVADFKL----DHTDSK
NLKADV-----------VDDKIVISDENAAE-----------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_007576.1|c1|1440481-1442646|+|YP_396074.1|ATPase/chaperone_ClpE,_putative_specificity
------------------------------------------------------------
MLCQNCQKNPATIHLYTSVNGQNQAI---NLCQNC-------------------------
---------------------------------YQALKQQGMS-----G-----------
-QYNDP------------------------FGFSNLDELFN-------------------
--AINNPNAERNAANQGPQTQ-----GGRNGGGNNGQNGES-LLSQFGVNLTNLAKGGQI
D--PVIGRDKEIARVIEILNRRTKNNPVLIGEAGVGKTAVVEGLAQKIAD--GDVPAKLK
D----RQVIRLDVVSLVQGTGIRGQFEERMQQLITELK-QNKQIILFIDEIHEIVGAG--
-NAEGGMDAGNVLKPALARGELQLVGATTNNEFRQ-IEKDAALARRLQPVAVNEPSVDET
VLILKGLQDKYESYHHVHYTDEALKAAAALSSRYIQDRYLPDKAIDLL-DEAGSKKNLTI
-----TLMDPKELEAKIKSAEA--QKQEALKQED---YEKAAT-YRDQVTQLSEMKANNS
VEKSQE------------------------------------------------------
-------------PTITEKDMEKIVEEKTHIPVGELKAQEQAQLKNLAQDLEAHVIGQDT
AVDKVARSIRRSRIGFNKSGRPIGSFLFVGPTGVGKTELAKQIAKELFGSTDAMIRFDMS
EYMEKFSVSKLIGSPPGYVGYEEAGQ-L--TEQVRRNPYS--LILLDEIEKAHPDVMHMF
LQILDDGRLTDSQG-RTVSFKDTIIIMTSNAG--------QTDAEANVGFGAAVAG----
----------QTHSILDQLTNYFKPEFLNRFDDIIEFQPLSKDNLLKIVSLMLDQT-NAM
-IADQGLHIAVTDDAKSKLVDLGYNPEMGARPLRRVIQEQIEDRVADYYL----DHPEHK
QLKAQL-----------NDDQIQIVQG---------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NZ_ABWJ01000010.1|c1|43032-45131|-|ZP_03211432.1|ATP-binding_subunit_of_Clp_protease_and
------------------------------------------------------------
-MNPTNASDPFGFG-----SLDNIFR---AMNQGMD------------------------
------------------------------------------------------------
-QPQQP------------------------NAQVPPTQAGR-------------------
--------GGNGNNGRNGNGG-----KG--------------LLGQFGVDLTEQARKGQI
D--PVIGRDKEISRVIEILNRRTKNNPVLIGEAGVGKTAVVEGLALKIAN--GDVPAKLQ
D----RHVIRLDVVSLVQGTGIRGQFEQRMQQLIDELK-QNKNIILFIDEIHEIVGAG--
-NAEGGMDAGNVLKPALARGELQLVGATTSNEYRQ-IEKDSALARRLQPVMVEEPSVDET
IKILKGLQPRYQDFHHVKYTEGAIEAAATLSNRYIQDRFLPDKAIDLL-DEAGSRKNLT-
--I--ATVDPETIKAKIADAEK--QKQAALKQED---YEKAAF-YRDQVTKLEDMAKKQS
NLPDN--EI---------------------------------------------------
-------------PTVTEKDMEKIVEEKTNIPVGELKAQEQAQLKNLASDLEQHVIGQNE
AVDKVARAIRRNRIGFNKTGRPIGSFLFVGPTGVGKTELAKQLAKELFGSEDAMIRFDMS
EYMEKFSVSKLIGSPPGYVGYEEAGQ-L--TEKVRRNPYS--LILLDEIEKAHPDVMNMF
LQILDDGRLTDSQG-RTVSFKDTIIIMTSNAG--------STDAEANVGFGATLSG----
----------KTHSVLDQLGNYFKPEFLNRFDDIVEFKPLSKDDLLKIVSLMINDT-NNN
-LKSQGLTIHVTDPVKEKLVTLGYNPSMGARPLRRVIQEQIEDRVADFYL----DHPNAK
ELEARI-----------SNGEITVGEPAKAEASSKTAKK---------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_013198.1|c1|1850605-1852827|+|YP_003171569.1|ATP-dependent_clp_protease_ATP-binding_subunit
--------------------------------------------------------MLCE
NCHKNPATIHLSTVVNGTRQEINLCQNCYQLLKKQA------------------------
------------------------------GGNMNPTNASDPF-----G-----------
-FGSLD------------------------DIFRAMNQGMD-------------------
QPQQPNAQVPPTQAGRGGNNG-----RNGNGGKG--------LLGQFGVDLTEQARKGQI
D--PVIGRDKEISRVIEILNRRTKNNPVLIGEAGVGKTAVVEGLALKIAN--GDVPAKLQ
D----RHVIRLDVVSLVQGTGIRGQFEQRMQQLIDELK-QNKNIILFIDEIHEIVGAG--
-NAEGGMDAGNVLKPALARGELQLVGATTSNEYRQ-IEKDSALARRLQPVMVEEPSVDET
IKILKGLQPRYQDFHHVKYTEGAIEAAATLSNRYIQDRFLPDKAIDLL-DEAGSRKNLT-
--I--ATVDPETIKAKIADAEK--QKQAALKQED---YEKAAF-YRDQVTKLEDMAKKQS
NLPDD--EI---------------------------------------------------
-------------PTVTEKDMEKIVEEKTNIPVGELKAQEQAQLKNLASDLEQHVIGQNE
AVDKVARAIRRNRIGFNKTGRPIGSFLFVGPTGVGKTELAKQLAKELFGSEDAMIRFDMS
EYMEKFSVSKLIGSPPGYVGYEEAGQ-L--TEKVRRNPYS--LILLDEIEKAHPDVMNMF
LQILDDGRLTDSQG-RTVSFKDTIIIMTSNAG--------STDAEANVGFGATLSG----
----------KTHSVLDQLGNYFKPEFLNRFDDIVEFKPLSKDDLLKIVSLMINDT-NNN
-LKSQGLTIHVTDPVKEKLVTLGYNPSMGARPLRRVIQEQIEDRVADFYL----DHPNAK
ELEARI-----------SNGEITVGEPAKAEASSKTAKK---------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NZ_ACIQ02000013.1|c1|380498-382984|-|ZP_06598579.1|negative_regulator_of_genetic_competence
--------------------------------------MNQF-TVQAQRALQLSIEAAES
LHHNYIGTEHILLGLR-R-EGTALAA---KVLAANGIEE--EKILDMISRFLSPDSNVTV
AD----RSGYTPSARRVLDAAIQEANRN--RSKLVGTEHILISILKE-P-----------
-SSAAS------------------------RIITTLGGNVQ-------------------
NMYQQILNAI--GPRFSGAEQ-----E-GGQRDQRQQ-SSTPMLDQYSRDLTALARQDRL
D--PVIGREAEIMRVIQILSRRTKNNPCLIGEPGVGKTAVAEGIAERIVS--GRVPDTIA
G----KRLLTLDISAMVAGSKYRGEFEERIKRVIAEAK-NDGRSLLFIDEIHTIIGAG--
GAE-GALDAANILKPALARGELQIIGATTLDEYRKHIERDAALERRFQPVNIEEPSEEES
YEILRGVAPKYEEHHHVLIEDGALRAAVKLSSRYINERYLPDKAIDLI-DEAASRLRISF
SGE--P-EKLKRLREQIEELEL--EKEDCIRRED---LEGAAA-VKKKQEEKRRKLEKES
ESLRREQEE---------------------------------------------------
-----------HPLHVTEAEIARVVSQWTRIPVEKLAEAESEKLKKLEQNLHQRVVGQSE
AVHAVAQAIKRGRVGLKDPRRPIGSFMFLGPTGVGKTELSKALAELMFGSENDLIRVDMS
EYMEKYSVSKMIGSPPGYVGYDEGGQ-L--SEKVRRRPYS--VVLFDEIEKAHPDVLNIL
LQVLDDGHITDAQG-RKISFKNTIIIMTSNAG--------AESIVNPKRLGFSSADGSRE
KNYEL-----MKEKVMEEVKRLFRPEFLNRIDEILVFHPISREDMGEILGIMLKGV-RQR
ALSELNIRLSFDQGTKDYLIEKGFDARYGARPLRRTIQSYVEDQLAEQILEGRLQRDCSV
RISLDR-----------KKQTLKYSVRSSRRKTADAEGEH--------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_011729.1|c3|2101254-2103719|+|YP_002377176.1|ATPase_AAA-2_domain_protein
--------------------------------------MFERFTEKAIKVIMLAQEEARR
LGHNFVGTEQILLGLIG--EGTGVAA---KVLKSMGVNL--KDARIEVEKIIGR-----G
SGFVAVEIPFTPRAKRVLELSLEEARQL--GHNYIGTEHLLLGLIRE-G-----------
-EGVAA------------------------RVLENLGVDLS-------------------
KVRTQVIRMLGETAEVAAGGP-----TTGRNKTP--------TLDEFGSNLTQMAAEGKL
D--PVVGRQKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIAN--KDVPDILE
E----KRVVTLDIGLLVAGTKYRGEFEERLKKIMDEIR-QAGNVILVIDEVHTLIGAG--
-AAEGAIDAANILKPALARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPTVDET
IEILYGLRERYEQHHKLKILDEALEAAAKLSDRYISDRYLPDKAIDLI-DEAGSRVRLIT
SQL--P-PAAKELDKELRQILK--QKDDAVRAQD---FDRAGE-LRDREMEIKSEIRAIA
SAKKNEGEGDE-------------------------------------------------
-------------PHVDAEEIANIVASWTGIPVNKLTETESEKLLHMEDTLHQRLIGQED
AVKAVSRAIRRARVGLKNPNRPIASFVFSGPTGVGKTELTKALAAYFFGSEDAMIRLDMS
EFMERHTVSKLIGSPPGYVGYNEGGQ-L--TEAVRRRPYT--VVLFDEIEKAHPDVFNIL
LQILEDGRLTDAKG-RTVDFKNTLLIMTSNIGSKVIEKGGGGLGFEFETDQAEAQYNR--
----------IRSLVNEELKQYFRPEFLNRLDEIIVFRQLNRDEVTDIADILLKEV-FGR
-LTEKGITLEVTQKFKDRLVEEGYNPAYGARPLRRAIMRLLEDVLAEEILSG--RVKEGD
TAVADID----------EEGKVKILPGERRELLTQASE----------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NZ_ACZH01000017.1|c1|92242-94767|+|ZP_05803504.1|ATPase_AAA-2_domain_protein
-------------------------------------MFERF-TDRARRVVVLAQEEARM
LNHNYIGTEHILLGLI-H-EGEGVAA---KALESLGISL--EAVRQQVEEIIGQ-----G
QQAPSGHIPFTPRAKKVLELSLREALQL--GHNYIGTEHILLGLIRE-G-----------
-EGVAA------------------------QVLVKLGADLN-------------------
RVRQQVIQLLSGYSGGKEAAT-----A-G-GPAEGTP-STSLVLDQFGRNLTQAARESKL
D--PVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVK--GEVPETLK
D----KHLYTLDLGALVAGSRYRGDFEERLKKVLKEIR-TRGDIILFIDELHTLVGAG--
AAE-GAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVAEPSLPHT
IEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLI-DEAGSRMRIRR
MTA--P-PDLREFDEKIAGVRR--DKESAIDSQD---FEKAAS-LRDKEKQLLAAKAKRE
KEWKAGDMD---------------------------------------------------
-----------VVAEVDGELIAEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQKD
AIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKTLAEFLFGDEDALISLDMS
EFSEKHTVSRLFGSPPGYVGYEEGGQ-L--TEKVRRKPFS--VVLFDEVEKAHPDIFNSL
LQILEDGRLTDSQG-RVVDFKNTVIIMTTNLG--------TRDISKGFNLGFAAQGDVKT
NYER------MKVKVNEELKQHFRPEFLNRVDDTVVFHQLTEEDIIQIVDLMVAKV-DER
-LKDRDMGIELSAEAKSLLAKKGYDPVMGARPLRRTIQREIEDILSEKILFG--ELRPGH
IVVVGTEGEG-------DEKKFSFRGEEKSALPDVPPIEQAAGGGPNLTKEA--------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>AJ845083.2|c1|7361-9886|-|CAH60133.1|putative_Clp-family_ATP-binding_protease
-------------------------------------MFERF-TDRARRVVVLAQEEARM
LNHNYIGTEHILLGLI-H-EGEGVAA---KALESLGISL--EAVRQQVEEIIGQ-----G
QQAPSGHIPFTPRAKKVLELSLREALQL--GHNYIGTEHILLGLIRE-G-----------
-EGVAA------------------------QVLVKLGADLN-------------------
RVRQQVIQLLSGYSTGKETAT-----A-G-GPAEGTP-STSLVLDQFGRNLTQAARESKL
D--PVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVK--GEVPETLK
D----KHLYTLDLGALVAGSRYRGDFEERLKKVLKEIR-TRGDIILFIDELHTLVGAG--
AAE-GAIDAASILKPMLARGELQTIGATTLDEYRKYLEKDAALERRFQPIQVAEPSLPHT
IEILKGLRDRYEAHHRVSITDEALVQAATLADRYISDRFLPDKAIDLI-DEAGSRMRIRR
MTA--P-PDLREFDEKIAGVRR--DKESAIDAQD---FEKAAS-LRDKEKQLLAAKAKRE
KEWKAGDMD---------------------------------------------------
-----------VVAEVDGELIAEVLATATGIPVFKLTEEESSRLLRMEDELHKRVIGQED
AIKALSQAIRRTRAGLKDPKRPGGSFIFAGPSGVGKTELSKTLAEFLFGDEDAMISLDMS
EFSEKHTVSRLFGSPPGYVGYEEGGQ-L--TEKVRRKPFS--VVLFDEVEKAHPDIFNSL
LQILEDGRLTDSQG-RVVDFKNTVIIMTTNLG--------TRDISKGFNLGFAAQGDVKT
GYER------MKAKVNEELKQHFRPEFLNRVDDTVVFHQLSQEDIIQIVDLMIAKV-DER
-LKDRDMGIELSQDAKILLAKRGYDPVLGARPLRRTIQREIEDVLSEKILFG--ELRPGH
IVVVDTEGEG-------EEKKFTFRGEEKSALPDVPPIEAAGGAGPNLSKDA--------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NZ_ACEV01000044.1|c1|7954-10449|+|ZP_05479902.1|ATPase_AAA-2_domain_protein
-------------------------------------MFERF-TDRARRVVVLAQEEARM
LNHNYIGTEHILLGLI-H-EGEGVAA---KALESLGIAL--EGVRQQVEEIIGQ-----G
QQAPSGHIPFTPRAKKVLELSLREALQL--GHNYIGTEHILLGLIRE-G-----------
-EGVAA------------------------QVLVKLGADLN-------------------
RVRQQVLQLLSGYQTGEKSTE-----S-GSGRGEGTP-SSSLVLDQFGRNMTVLAREGKL
D--PVIGRGKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQSIVK--GEVPETLK
D----KQLYTLDLGSLVAGSRYRGDFEERLKKVLKEIK-TRGDIILFIDELHTLVGAG--
AAE-GAIDAASILKPMLARGELQTIGATTLEEYRKYIEKDAALERRFQPIQVGEPSLEHT
IEILKGLRDRYEAHHRVSITDSALVAAATLADRYINDRFLPDKAIDLI-DEAGARMRIRR
MTA--P-PDLREFDEKIADVRR--DKESAIDAQD---FERAAR-LRDEEKQLLGQKGERE
KQWKDGDLD---------------------------------------------------
-----------VVAEVDDEQIAEVLANWTGIPVFKLTEEETTRLLRMEDELHKRIIGQED
AVKAVSQAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALASFLFGEDDALIQIDMG
EFHDRYTASRLFGAPPGYVGYEEGGQ-L--TEKVRRKPFS--VVLFDEIEKAHQEIYNTL
LQVLEDGRLTDGQG-RTVDFKNTVLIFTSNLG--------TSDISKSVSLGFSSGADSTN
RYEK------MKQKVNEEMKKHFRPEFLNRIDDIIVFHQLNQEQIIQMVDLMIGRV-ETQ
-LKAKDMEIELTEKAKALLAKRGFDPVLGARPLRRTIQREIEDQLSEKILFG--EVEPGQ
IIVVDVEGWSGNTDDRDDEADLVFRAGGRVVSLT--------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_009953.1|c9|2522682-2525192|+|YP_001537044.1|ATPase
-------------------------------------MFERF-TDRARRVVVLAQEEARM
LNHNYIGTEHILLGLI-H-EGEGVAA---KALESLGISL--EGVRQQVEEIIGQ-----G
QQAPSGHIPFTPRAKKVLELSLREALQL--GHNYIGTEHILLGLIRE-G-----------
-EGVAA------------------------QVLVKLGADLN-------------------
RVRQQVIQLLSGYQ-GKEPAA-----A-GTAPGEAAP-STSLVLDQFGRNLTQAAREGKL
D--PVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLSQRIVK--GEVPETLK
D----KQLYTLDLGALVAGSRYRGDFEERLKKVLKEIR-TRGDIILFIDEIHTLVGAG--
AAE-GAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVGEPSLAHT
IEILKGLRDRYEAHHRVSITDAALVAAATLADRYISDRFLPDKAIDLI-DEAGARMRIRR
MTA--P-PDLRDFDERIAQVRR--DKESAIDAQD---FERAAQ-LRDTEKQLLGQKAQRE
KEWKAGDLD---------------------------------------------------
-----------VVTEVDDEQIAEVLGNWTGIPVYKLTEEETSRLLRMEDELHKRVIGQED
AVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGSEDALIQLDMS
EFHDRYTVSRLVGAPPGYVGYDEGGQ-L--TEKVRRRPFS--VVLFDEIEKAHPDVFNTL
LQILEDGRLTDGQG-RIVDFKNTVIILTTNLG--------TRDVAKAVSLGFQASDDSDS
NYDR------MKQKVNDELKQHFRPEFLNRIDDTIVFHQLRHQEILSIVDIMIGRI-ETQ
-LRNKDMGLELTDNAKKYLATKGFDPVLGARPLRRTIQRDIEDNLSERILFN--ELTPGQ
IIVVDCDGDPTNI----DTSTLTFHGTDKPATPGPIAGIGSVPA----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_009380.1|c12|4842348-4844882|-|YP_001161081.1|ATPase
-------------------------------------MFERF-TDRARRVVVLAQEEARM
LNHNYIGTEHILLGLI-H-EGEGVAA---KALESLGISL--EGVRQQVEEIIGQ-----G
QQAPSGHIPFTPRAKKVLELSLREALQL--GHNYIGTEHILLGLIRE-G-----------
-EGVAA------------------------QVLVKLGADLN-------------------
RVRQQVIQLLSGYQ-GKEPAA-----A-GTAPGEAAP-STSLVLDQFGRNLTQAAREGKL
D--PVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLSQRIVK--GEVPETLK
D----KQLYTLDLGALVAGSRYRGDFEERLKKVLKEIR-TRGDIILFIDEIHTLVGAG--
AAE-GAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVGEPSLPHT
IEILKGLRDRYEAHHRVSITDAALVAAATLADRYISDRFLPDKAIDLI-DEAGARMRIRR
MTA--P-PDLRDFDERIAQVRR--DKESAIDAQD---FERAAQ-LRDTEKQLLGQKAQRE
KEWKAGDLD---------------------------------------------------
-----------VVTEVDDEQIAEVLGNWTGIPVYKLTEEETSRLLRMEDELHKRVIGQED
AVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGSEDALIQLDMS
EFHDRYTVSRLVGAPPGYVGYDEGGQ-L--TEKVRRRPFS--VVLFDEIEKAHPDVFNTL
LQILEDGRLTDGQG-RIVDFKNTVIILTTNLG--------TRDVAKAVSLGFQASDDSDS
NYDR------MKQKVNDELKQHFRPEFLNRIDDTIVFHQLRHREILSIVDIMIGRI-ETQ
-LRNKDMGLELTDNAKQYLATKGFDPVLGARPLRRTIQRDIEDNLSERILFN--ELNPGQ
IVIVDCDGDPTNI----DSSTLTFRGTDKPADLPDAVPADLGGAATGADDTA--------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_009953.1|c19|5330926-5333460|-|YP_001539453.1|ATPase
-------------------------------------MFERF-TDRARRVVVLAQEEARM
LNHNYIGTEHILLGLI-H-EGEGVAA---KALESLGISL--EGVRQQVEEIIGQ-----G
QQAPSGHIPFTPRAKKVLELSLREALQL--GHNYIGTEHILLGLIRE-G-----------
-EGVAA------------------------QVLVKLGADLN-------------------
RVRQQVIQLLSGYQ-GKEPAA-----A-GTAPGEAAP-STSLVLDQFGRNLTQAAREGKL
D--PVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLSQRIVK--GEVPETLK
D----KQLYTLDLGALVAGSRYRGDFEERLKKVLKEIR-TRGDIILFIDEIHTLVGAG--
AAE-GAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVGEPSLAHT
IEILKGLRDRYEAHHRVSITDAALVAAATLADRYISDRFLPDKAIDLI-DEAGARMRIRR
MTA--P-PDLRDFDERIAQVRR--DKESAIDAQD---FERAAQ-LRDTEKQLLGQKAQRE
KEWKAGDLD---------------------------------------------------
-----------VVTEVDDEQIAEVLGNWTGIPVYKLTEEETSRLLRMEDELHKRVIGQED
AVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGSEDALIQLDMS
EFHDRYTVSRLVGAPPGYVGYDEGGQ-L--TEKVRRRPFS--VVLFDEIEKAHPDVFNTL
LQILEDGRLTDGQG-RIVDFKNTVIILTTNLG--------TRDVAKAVSLGFQASDDSDS
NYDR------MKQKVNDELKQHFRPEFLNRIDDTIVFHQLRHQEILSIVDIMIGRI-ETQ
-LRNKDMGLELTDNAKKYLATKGFDPVLGARPLRRTIQRDIEDNLSERILFN--ELTPGQ
IIVVDCDGDPTNI----DTSTLTFHGTDKPIDVPDAVPADLGGAATGADDTA--------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>AF497482.1|c1|24503-26896|-|AAM94782.1|CalR4
------------------------------------------------------------
-----------------M-RVRGVAA---KALESLGISL--EGVRQQVEEIIGQ-----G
QQAPSGHIPFTPRAKKVLELSLREALQL--GHNYIGTEHILLGLIRE-G-----------
-EGVAA------------------------QVLVKLGADLN-------------------
RVRQQVIQLLSGYQ-GKEPAA-----A-GAAAGEAAP-STSLVLDQFGRNLTQAAREGKL
D--PVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLSQKIIK--GEVPETLK
D----KQLYTLDLGALVAGSRYRGDFEERLKKVLKEIR-TRGDIILFIDEIHTLVGAG--
AAE-GAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVGEPSLAHT
IEILKGLRDRYEAHHRVSITDAALVAAATLADRYISDRFLPDKAIDLI-DEAGARMRIRR
MTA--P-PDLRDFDERIAQVRR--DKESAIDAQD---FERAAQ-LRDKEKQLLGQKAQRE
KEWKAGDLD---------------------------------------------------
-----------VVSEVDDEQIAEVLGNWTGIPVYKLTEEETSRLLRMEDELHKRVIGQED
AVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGSEDALIQLDMS
EFHDRYTVSRLVGAPPGYVGYDEGGQ-L--TEKVRRRPFS--VVLFDEIEKAHPDVFNTL
LQILEDGRLTDGQG-RIVDFKNTVIILTTNLG--------TRDVAKAVSLGFQASEDSES
NYDR------MKQKVNDELKQHFRPEFLNRIDDTIVFHQLRENEILSIVDIMIARI-ETQ
-LRNKDMGLELTDNAKKYLAKKGFDPVLGARPLRRTIQRDIEDNLSERILFN--ELTPGQ
IVVVDCEGDPSNT----AKSKLVFRGADKPPTGPVPDAGAVTA-----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NZ_GG657738.1|c8|2969970-2972426|-|ZP_04606140.1|ATPase
-----------------------------------------------------------M
LNHNYIGTEHILLGLI-H-EGEGVAA---KALESLGISL--EGVRQQVEEIIGQ-----G
QQAPSGHIPFTPRAKKVLELSLREALQL--GHNYIGTEHILLGLIRE-G-----------
-EGVAA------------------------QVLVKLGADLN-------------------
RVRQQVIQLLSGYQ-GKEPAA-----A-GTTTGEAAP-STSLVLDQFGRNLTQAAREGKL
D--PVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLSQKIIK--GEVPETLK
D----KQLYTLDLGALVAGSRYRGDFEERLKKVLKEIR-TRGDIILFIDEIHTLVGAG--
AAE-GAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVGEPSLAHT
IEILKGLRDRYEAHHRVSITDAALVAAATLADRYISDRFLPDKAIDLI-DEAGARMRIRR
MTA--P-PDLRDFDERIAQVRR--DKESAIDAQD---FERAAQ-LRDKEKQLLGQKAQRE
KEWKAGDLD---------------------------------------------------
-----------VVSEVDDEQIAEVLGNWTGIPVYKLTEEETSRLLRMEDELHKRVIGQED
AVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGSEDALIQLDMS
EFHDRYTVSRLVGAPPGYVGYDEGGQ-L--TEKVRRRPFS--VVLFDEIEKAHPDVFNTL
LQILEDGRLTDGQG-RIVDFKNTVIILTTNLG--------TRDVAKAVSLGFQASEDSES
NYDR------MKQKVNDELKQHFRPEFLNRIDDTIVFHQLRQGEILSIVDIMIARI-ETQ
-LRNKDMGLELTDNAKKYLAKKGFDPVLGARPLRRTIQRDIEDNLSERILFN--ELIPGQ
IVVVDCEGDPEDI----DKSKLVFRGSDRPAEVPDAIPAELGGTEAA-------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NZ_ADBZ01000016.1|c1|75698-78235|-|ZP_06217512.1|ATPase_AAA-2_domain_protein
-------------------------------------MFERF-TDRARRVVVLAQEEARM
LNHNYIGTEHILLGLI-H-EGEGVAA---KALESLGISL--EGVRQQVEEIIGQ-----G
QQAPSGHIPFTPRAKKVLELSLREALQL--GHNYIGTEHILLGLIRE-G-----------
-EGVAA------------------------QVLVKLGADLN-------------------
RVRQQVIQLLSGYQ-GKEPAA-----A-GAAPGEAAP-STSLVLDQFGRNLTQAAREGKL
D--PVIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLSQKIIK--GEVPETLK
D----KQLYTLDLGALVAGSRYRGDFEERLKKVLKEIR-TRGDIILFIDEIHTLVGAG--
AAE-GAIDAASILKPMLARGELQTIGATTLDEYRKHLEKDAALERRFQPIQVGEPSLAHT
IEILKGLRDRYEAHHRVSITDAALVAAATLADRYISDRFLPDKAIDLI-DEAGARMRIRR
MTA--P-PDLRDFDERIAQVRR--DKESAIDAQD---FERAAQ-LRDTEKQLLGQKAQRE
KEWKAGDLD---------------------------------------------------
-----------VVSEVDDEQIAEVLGNWTGIPVYKLTEEETSRLLRMEDELHKRVIGQED
AVKAVSKAIRRTRAGLKDPKRPSGSFIFAGPSGVGKTELSKALAEFLFGSEDALIQLDMS
EFHDRYTVSRLVGAPPGYVGYDEGGQ-L--TEKVRRRPFS--VVLFDEIEKAHPDVFNTL
LQILEDGRLTDGQG-RIVDFKNTVIILTTNLG--------TRDVAKAVSLGFQASEDSES
NYDR------MKQKVNDELKQHFRPEFLNRIDDTIVFHQLRQLEILSIVDIMIARI-ETQ
-LRNKDMGLELTDNAKKYLAKKGFDPVLGARPLRRTIQRDIEDNLSERILFN--ELTPGQ
IVVVDCEGDPEDI----DKSKLVFRGADRPDAVPDAVPADLGGTAATGADDAA-------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NZ_CM000913.1|c18|6644336-6646918|+|ZP_06775090.1|chaperone
-----MTAVTTSPFGSGDPFSDLFNRFFGMSPAASPPAVQRVPIGRLLSDSAQELLAAAG
ARAAEDGSDLDTPHLLWAATRVPAGR---QVLEQAGVDP---------DALADRVGRSLP
TGTGAGEPALTPAAKRALLAAHARSQAL--GASYIGPEHILAAL----------------
-ADDPA------------------------SGFTGALPSGG-------------------
PGGDPGTGERHARAGGGSPTP---------------------TLDEYGRDLTEEARAGRL
D--PVVGRAQEIEQTVEILSRRTKNNPVLIGDPGVGKTAIVEGLAQRVVA--DEVPRALK
D----RRVVSLDLAGLVAGSKYRGEFEERLKKVIDEVTAADKSVVLFIDELHTVVGAG--
GGGEGSMDAGNILKPALARGDLSVVGATTIDEYRKHIEKDAALERRFQPVMVPEPTVEET
VEILQGLRDSYEIHHQVRFTDEALDAAAALSDRYLSDRFLPDKAIDLM-DQAGARVGLRA
VGT--P-DRNHDLEDRVTKLRR--EKDEAVSSED---YERAGA-LKARLRAAEEELAQVG
EEREQT------------------------------------------------------
-------------ADVTAEDIAEVLSARTGIPVSQLTETERHRLMKLEDALHERVIGQDE
AVVAVSQAVRRGRAGMGDPDRPTGSFLFLGPTGVGKTELAKALAQLLFGDADRMIRFDMS
EFQEKHTVSRLVGSPPGYVGYEEAGQ-L--TEAVRRKPYS--VVLFDEVEKAHPDVFHLL
LQVLDDGRLTDAQG-RTVDFRHTVVIMTSNIG--------SKRILDHHGAVDE-------
----------IRDDLMGDLRAHFRPEFLNRIDEVIVFHALTRDDLIHIVDLLLEGT-RRR
-LHAQRVGFEITEAAKERLANLGYQPEFGARPLRRTLQTELDNRLSTMLLDG--TLSPGD
TVVADV-----------RDGGLTLSLKQPDPTADDPAADPAADPSAEPSPEPSAEPEKDG
KGRSGEAGTEAGN-----------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NZ_ACEX01000722.1|c1|4065-6602|+|ZP_05520462.1|Clp_protease_ATP_binding_subunit
MGSGNDGPDDFGPDPLGDFLARFLGTGPGGQRSDRHVDFGRLMSETARHLVSSAASYAAE
HGSTDLDTEHLLRAAL----SAEPTR---TMVSRAGADP---------DQLAAEIDRQAG
DGPPRGSVAVTPAVKRALLDAHEIARAR--GSSYIGPEHVLIALAAN-R-----------
-DSTAG------------------------QILHAAHFEPRS------------------
TPPAGRAAPVPGADQRPVADR-----------------RGTPTLDRYGRDLTDLAREGRI
D--PVIGRDEEIEQSIEVLARRGKNNPVLIGEAGVGKTAVVEGLAQRIAD--ADVPDILL
G----RRVIQLDFAGVVAGTRYRGDFEQRLTAIIDEIRAHSDELIVFIDELHTVVGAGG-
GSEGGTMDASNLLKPALARGELHVMGASTLQEYRQYIEKDAALARRFQPIMVPEPTPAAA
VSILHGLRDRHEAHHQVRYTDEALFAAVELADRYLADRFLPDKAIDLM-DQAGARVRLR-
SSA--RGTDLRALERELEQLTR--DKDQAVAAEQ---YERATA-LRDRIAELGARITEGS
GAQFHGSRV---------------------------------------------------
-------------SEVTVEDIADIVSRQTGIPVSSLTQEERERLLGLEEHLHKRVIGQEE
AVAAVSDAVLRSRAGLADPHRPSGSFLFLGPTGVGKTELARALAEALFGSEDRMIRLDMS
EYQEKHTVSRLVGAPPGYVGHEEAGQ-L--TEAVRRQPYA--LLLMDEVEKGHADVFNIL
LQVLDDGRLTDAQG-RTVDFKNTVIVMTSNLGSEAI----TGRGAVLGFGGGDAEADEAS
----------RRERVLRPLREHFRPEFLNRIDEIVIFRRLADEQLRQITDVLLEET-RRR
-MRAQDIPVDFTPAAVDWLARHGHQPEYGARPLRRTIQREVDNPLSRMLLGG--ELRPHS
PVEVDV-----------EDDTLAFHIEQEPAAT---------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NZ_GG657738.1|c18|6594561-6597113|+|ZP_04609205.1|ATPase
-----MGPGDFGTDPWDEFLARYFGRGEGGRRSAHRVDITRLMTADAREMLADAARRAAQ
RHSNDLDTDHLLWAAL----QREALR---DLIRRAGADP------DALVNALGGRGDGAP
RGEVPPNLSLTPAAKRALLDAHQLSRAM--GANYIGPEHILMA-----------------
-LPLNP------------------------ESPAGRMLAAG-------------------
RIQPESLQAA-NAERGPMPGP-----KPDHGT---------PTLDQYGQDLTELARNDQI
D--PVIGRAAEIEQAVEILSRRTKNNPVLIGEAGVGKTAIVEGLAERICD--GDVPQTLI
G----KRVVQLDLAGLVAGTRYRGDFEERLKKVIEEIRAHRDELIIFLDEIHTLVGAGGA
GSE-GGMDASNMLKPALARGELRVIGATTLDEHRRSIEKDAALARRFQPVLVPEPTVEDT
VAILRGLRDRYEAHHQVRFTDEALVAAAELSDRYVTDRYLPDKAIDLI-DQAGARVRLR-
--NRTPGSDVRELEQQLDEVRR--DKEQAVADEQ---YERASA-LRDRLAELEAQISRAK
GDDGNGSQV---------------------------------------------------
-------------PAVGPQEIAEVVSRATGIPVAQLTEEERDRLLRLEGHLHQKVVGQDD
AVGAVAEAVRRSRTGLADPNRPMGSFLFLGPTGVGKTELGRALAEALFGEADRMVRLDMS
EFQERHTVARLVGAPPGYVGYEEAGQ-L--TEAVRRRPYA--VVLLDEIEKAHPDVFNIL
LQVLDDGRLTDSQG-RTVNFKNTVLIMTSNLG--------SELITGSQRAVGFGAGEPGT
ERESDE----LRERLMRRLQENFRPEFLNRIDEVIIFRRLEQQQLRQITELLLEQT-RRR
-LHAQDIDIAFTVAGIDWLAEHGYQPEFGARPLRRVIQREVDNRLSRMLLES--AVSPGQ
RVTVDV-----------RDGALAFEVVAGDRGYSAATTSHPR------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_009972.1|c1|34479-36947|-|YP_001542808.1|ATPase
------------------------------------MKLERF-TEKAQEAFQHAQELMHE
QHHSQLDVEHIFLALL-R-QSDGIAG---RVLGRLSVNV--ESVIARVERELDKSPKVYN
YGYPQQSVYVTPRTQRLVKRAEQEAERM--GDQYVSTEHLLIAIAGE-R-----------
-EGASA------------------------RILASFGIDTE-------------------
RLLSI-LMEIRGSQRADDPTA-----E-SRYE----------VLEKYSTDLTALASQGLL
D--PVVGRDSEITRVIRILSRRSKNNPVLVGETGVGKTAIAEGLAQRIAN--GDVPELLR
N----RRVLALDLAGMVAGSKFRGEFEERLKAVMDEVRSAKGKVIVFIDELHTVVGAG--
SAA-GSIDASNMLKPALARGEMQAVGATTTDEYRKHIEKDAALERRFSPVYVEEPDVETT
IEMLRGLRRRYEEHHNLTISDAALKAAANLSHRYINDRFLPDKAIDLI-DEASAKLRIDI
YSM--P-KELREKQQAIRDLHR--GEEDAGNQRD---YERAAI-LKAEALALESEFQLER
QQWLETNQ----------------------------------------------------
-----------LDDVVDEEDVATIVANWTGIPVQRMLETEKLKLVEMEERLHARVVGQHE
AVTAVADAIRRARSGLKDPRRPIGSFIFVGPTGVGKTELAKALAAFLFDDEDAMTRVDMS
EYQERHTVSRLVGAPPGYVGYDEGGQ-L--TESIRRRPYQ--VILFDEIEKAHGDVFNSL
LQVLDDGRLTDAQG-RTVDFRNTVIIMTSNVGTDEIRAGSIGFRRENKIDMGE-------
----------VRKRVDDAMKRTFRPEFLNRIDEIILFKPLEMAELTGIIDILASEV-AGR
-LGELQITLHLTRAAKELLVQEGYNPVYGARPLRRTLQRLVETPLSRALLKG--EFSAGD
VVEVDV-----------ENGVIIFNKGERLQITSSKPVEPLSA-----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NZ_AAXW01000005.1|c1|148841-151459|-|ZP_01727975.1|ClpB_protein
---------------------------------MQPTNPNQF-TEKAWEAIVRTPDIAKQ
NSQQQIESEHLMKSL--T-EQEGLAT---SIFNKANISV--PKLRDRTEEFIRRQPKVSN
PGE---SVYLGRSLDSLLDRSEKFRKEF--EDDYISIEHLLLAYSKD-------------
-DRFGK------------------------NLFKEFGLSEN-------------------
NLKEI-IKQVRGNQKVTDQNP-----E-NKYE----------SLEKYGRDLTQLAREGKL
D--PVIGRDDEIRRTIQILSRRTKNNPVLIGEPGVGKTAIVEGLAQRIIN--RDVPESLR
D----RKLIALDMGSLIAGAKYRGEFEERLKAVLKEVTDSQGNIILFIDEIHTVVGAG--
ATQ-GAMDAGNLLKPMLARGELRCIGATTLDEYRKYIEKDAALERRFQEVLVNEPNVVDT
ISILRGLKERYEVHHGVKIADTALVAAAMLSNRYISDRFLPDKAIDLV-DESAAKLKMEI
TSK--P-EELDEVDRKILQLEM--ERLSLQKEEDEVSRERLEK-LEKELADLKEEQSQLN
AQWQAEKEVIDQIRELKETIDQVNLEIQQAERDYDLNKAAELRYGKLTDLQRQVKDLESK
IEERQTTGKTLLREEVVESDIAEIISKWTGIPISKLVESEKEKLLQLEDELHERVIGQEE
AVTAVSEAIQRSRAGLADPNRPTASFIFLGPTGVGKTELAKALAKNLFDTEEAIVRIDMS
EYMEKHSVSRLIGAPPGYVGYDEGGQ-L--TEAIRRRPYS--VILFDEIEKAHGDVFNIM
LQILDDGRLTDSQG-RVVDFKNTIIIMTSNIG--------SQYILDVAGDDTRYDE----
----------MRSRVMDAMRNNFRPEFLNRIDEIIIFHSLQKEQLREIVKLQIQLL-RNR
-LEDQKMSLKLADVALDFVADIGYDPVYGARPLKRAVQRYLETPIAKSILRG--EFKAGD
TIFADV-----------EDERLTFKRLPSEMLTV--------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_010995.1|c3|3802986-3805664|-|YP_001983648.1|ClpB
-----------------------------MPLSRYSMRIDRL-TNQLQMALSDAQSIALG
QDHSQLEPVHLLLAMLDQ-KGAGSVR---LLLAQAGFDV--AGLRTALNEQLEKLPQIKN
P---TGEVTMSADMVRLLNLADRHAQKV--GDKFVSSDSVLLVAMNE-T-----------
-QGGIG------------------------ELLKKHG-NAQ-------------------
RLQQA-IEKVRGGDKVEDADS-----E-GNRQ----------SLEKYTVDLTARAEAGKL
D--PVIGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIVN--GEVPEGLK
D----KRLLALDLGALLAGAKFRGEFEERLKSVINELAKQEGRIILFVDELHTMVGAG--
KAE-GAMDAGNMLKPALARGELHCVGATTLDEYRKYVEKDAALERRFQKVLVDEPGEEDT
IAILRGLKERYEVHHGVDITDSAIIAAAKLSQRYITDRQLPDKAIDLI-DEAASRIRMEI
DSK--P-EEMDRLERRLIQLKI--EREAVKKDEDEASKKRLAK-IDQDIDKIEREYGDLE
EIWRAEKAALQGSHEIKSQLEQARLELEEKRRKGDLARMSELQYGIIPQLEKQLDMA---
-SQAEMMEMKLLRNKVTDEEIAEVVSKWTGIPVSKMLEGEREKLLRMEEALHKRVIGQHE
AVVAVSNAVRRARAGLSDANRPNGSFLFLGPTGVGKTELCKALAEFLFDTSDAMVRIDMS
EFMEKHSVARLIGAPPGYVGYEEGGY-L--TESVRRKPYS--VVLLDEVEKAHPDVFNIL
LQVLEDGRLTDGQG-RTVDFRNTVIVMTSNLGSDRIQELAEDKSFDTVNFDFGVTDSMNS
SLNNENRYNAMKDAVMEVVAGHFRPEFINRIDEVVVFHPLGREQIRGIADIQLAQL-RKR
-LAERDLGLELDAAVMERLASVGFDPVYGARPLKRAIQQLIENPLAQEILAG--KFPPGA
IIHVHE-----------QGDRLAFEAKRLQ------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_009675.1|c3|4909255-4911936|+|YP_001381349.1|ATPase
-----------------MGAAWPAACQAPPPSYVRAMRMEKL-TVKAQEALAGAQTEARR
RDHQAIDVEHLVLALL-A-QPEGIAG---PILEKIGAEP--SLVASRVEDELRDVPKVSG
A-----EPYLANRLAKLIDRAEDAAKRL--KDEYVSTEHLLLAAAEE-------------
-KTGAG------------------------EALRGSGATPD-------------------
RIRAA-LQDVRGGARVTSPEA-----E-SQYR----------ALEKYAKDLTELAKAGKL
D--PVVGRDDEIRRVVQILSRRTKNNPVLVGDPGVGKTAIVEGLARRIVD--GDVPEGLK
G----KRLLALDLGAMVAGAKYRGEFEERLKGVLKEVVSSEGRIVLFIDEMHTIIGAG--
AAE-GAMDAGNMLKPALARGELHAIGATTVNEYRKHVEKDPALERRFQPVFVGEPSVPDT
ISILRGLKDRYELHHKVRIQDAALVEAARLSQRYITDRFLPDKAIDLV-DESASRLRIEI
DSM--P-TEVDEVRRRVAQLEI--ERQGLQREQDEASRHRLGQ-VEKELAQLNEEFTRLK
SRWDAEKAVIQEIAQAKQEIDALKQQQAQAEREANFQKAAEIKFGRLPELQRAVGELHEK
LAQLQSAGGPMLREEVTPEEIAEVVSKWTGIPVSKLMEGEVEKLLGMEDRLAQRVVGQDE
AVQAVSAAVRRARSGLQDPHRPIGSFIFLGPTGVGKTETARALAEFLFDDEGAMVRLDMS
EYMEKHAVSRLIGAPPGYVGYEEGGQ-L--TEAVRRRPYA--VILFDEIEKAHHDVFNVL
LQILDDGRLTDGQG-RTVDFRNAVVIMTSNIG--------SQEIQRLAGRPGADVSA---
----------IREAALENLRAEFRPEFLNRVDEIVVFRPLSREHVGRIVEIQLGRL-RKL
-LEERHITIELSAAAREAIADAGYDPVYGARPLKRAIQRMIQDPLATKLLRG--EFKAGD
HVVVDEG----------ADGNIAFAKGVRAIEGEVVVH----------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_011145.1|c1|468538-471150|-|YP_002132784.1|ATP-dependent_chaperone_ClpB
------------------------------------MRMEKL-TVKAQEVLAAAQGEARR
RDHQAVDVEHLVLALL-A-QEEGIAR---PVLEKIGADP--RLVASRVEDELRSLPKVSG
A-----EPYPANRLLKLFDRAEDGARKL--KDEYVSTEHLLLAAAED-------------
-KGGAG------------------------DALRASGATPD-------------------
RVRQA-VQEVRGGARVTSPEA-----E-SQYR----------ALEKYAKDLTDLARKGKL
D--PVIGRDDEIRRVVQILSRRTKNNPVLVGDPGVGKTAIVEGLARRIVD--GDVPEGLK
N----KRLLALDLGALLAGAKFRGEFEERLKAVLKEVTGSEGQIILFIDEMHTIVGAG--
AAE-GAMDAGNMLKPALARGELHAVGATTVNEYRKHIEKDPALERRFQPVFVGEPSLTDT
ISILRGLKDRYELHHKVRIQDAALVEAARLSSRYITDRFLPDKAIDLV-DEAASRLRIEI
DSM--P-TEVDEVRRRIGQLEI--ERQGLRKEQDEASRARLAA-VEKELAARNEEFTALK
GRWDAEKAVIQELSQARQELETLKVEQAAAERQADFQKAAEIKFGRLPELTRRVKAAEEK
LAEAQTRGA-MLKEEVTPEEIGEVVSKWTGIPVSRLMEGEVEKLLGMEQRLHERVVGQEE
AVSAVSAAVRRARSGLQDPNRPIGSFIFLGPTGVGKTETARALAQFLFDDERAMVRLDMS
EYMEKHTVSRLIGAPPGYVGYEEGGQ-L--TEAVRRRPYA--VVLFDEIEKAHHDVFNVL
LQILDDGRLTDGQG-RTVDFRNTVIIMTSNIG--------SADIQRLAGRPGADMQQ---
----------IREAALEHLRGEFRPEFLNRVDEIVVFRPLGREDVGRIVEIQLARL-RKL
-IEERHVTLELTEAAREAIADAGYDPVYGARPLKRAIQRMVQDPLATRLLQG--EFKAGD
HVVVDEG----------KDGNIVFRKGERPEVTVH-------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_011891.1|c1|466526-469138|-|YP_002490837.1|ATP-dependent_chaperone_ClpB
------------------------------------MRMEKL-TVKAQEVLAAAQGEARR
RDHQAVDVEHLVLALL-A-QEEGIAR---PVLEKIGADP--RLVASRVEDELRSLPKVSG
A-----EPYPANRLLKLFDRAEDEARKL--KDEYVSTEHLLLAAAED-------------
-KGGAG------------------------EALRASGATPE-------------------
RVRQA-VQEVRGGARVTSPEA-----E-SQYR----------ALEKYAKDLTDLARKGKL
D--PVIGRDDEIRRVVQILSRRTKNNPVLVGDPGVGKTAIVEGLARRIVD--GDVPEGLK
N----KRLLALDLGALLAGAKFRGEFEERLKAVLKEVTGSEGQIILFIDEMHTIVGAG--
AAE-GAMDAGNMLKPALARGELHAVGATTVNEYRKHIEKDPALERRFQPVFVGEPSLTDT
ISILRGLKDRYELHHKVRIQDAALVEAARLSSRYITDRFLPDKAIDLV-DEAASRLRIEI
DSM--P-TEVDEVRRRIGQLEI--ERQGLRKEQDEASRARLAA-VEKELAARNEEFTALK
GRWDAEKAVIQELSQARQELEALKVEQAAAERQADFQKAAEIKFGRLPELTRRVKAAEEK
LAEAQTRGA-MLKEEVTPEEIGEVVSKWTGIPVSRLMEGEVEKLLGMEQRLHERVVGQEE
AVSAVSAAVRRARSGLQDPNRPIGSFIFLGPTGVGKTETARALAQFLFDDERAMVRLDMS
EYMEKHTVSRLIGAPPGYVGYEEGGQ-L--TEAVRRRPYA--VVLFDEIEKAHHDVFNVL
LQILDDGRLTDGQG-RTVDFRNTVIIMTSNIG--------SADIQRLAGRPGADMQQ---
----------IREAALEHLRGEFRPEFLNRVDEIVVFRPLGREDVGRIVEIQLGRL-RKL
-IEERHVSLELTEAAREAIADAGYDPVYGARPLKRAIQRMVQDPLATRLLQG--EFKAGD
HVVVDEG----------KDGNIAFRKGERPEVTVH-------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_007760.1|c1|449830-452442|-|YP_463598.1|AAA_ATPase,_ClpA/B
------------------------------------MRMEKL-TVKAQEVLAAAQGEARR
RDHQAVDVEHLVLALL-G-QEEGIAR---PVLEKIGADP--RLVASRVEDELRSLPKVSG
A-----EPYPSNRLLKLFDRAEDDARKL--KDEYVSTEHLLLAAAED-------------
-KGGAG------------------------EALRASGATPD-------------------
RVRQA-VQEVRGGARVTSPEA-----E-SQYR----------ALEKYAKDLTDLARKGKL
D--PVIGRDDEIRRVVQILSRRTKNNPVLVGDPGVGKTAIVEGLARRIVD--GDVPEGLK
N----KRLLALDLGALLAGAKFRGEFEERLKAVLKEVTGSEGQIILFIDEMHTIVGAG--
AAE-GAMDAGNMLKPALARGELHAVGATTVNEYRKHIEKDPALERRFQPVFVGEPSLTDT
ISILRGLKDRYELHHKVRIQDAALVEAARLSSRYITDRFLPDKAIDLV-DEAASRLRIEI
DSM--P-TEVDEVRRRIGQLEI--ERQGLRKEQDEASRARLAA-VEKELAARNEEFTALK
GRWDAEKAVIQELSQARQELEALKVEQAAAERQADFQKAAEIKFGRLPELTRRVKAAEEK
LAEAQTRGA-MLKEEVTPEEIGEVVSKWTGIPVSRLMEGEVEKLLGMEQRLHERVVGQEE
AVSAVSAAVRRARSGLQDPNRPIGSFIFLGPTGVGKTETARALAQFLFDDERAMVRLDMS
EYMEKHTVSRLIGAPPGYVGYEEGGQ-L--TEAVRRRPYA--VVLFDEIEKAHHDVFNVL
LQILDDGRLTDGQG-RTVDFRNTVIIMTSNIG--------SADIQRLAGRPGADMQQ---
----------IREAALEHLRGEFRPEFLNRVDEIVVFRPLGREDVGRIVEIQLARL-RKL
-VEERHVTLELTEAAREAIADAGYDPVYGARPLKRAIQRMVQDPLATRLLQG--EFKAGD
HVVVDEG----------KDGNIAFRKGERPAVTVH-------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_010571.1|c1|2445459-2448077|+|YP_001818833.1|ATP-dependent_chaperone_ClpB
------------------------------------MDFAKL-TQMSRQAVTEAQNVARR
LHHNEVDTWHLLSALL-G-QENGIVP---GLLDKLAITP--SAVQLAVERELERLPKVTG
S-VDTSKVYVTQAVNEALTRAEDEAGKL--KDEYVSVEHLFLGLLEVGK-----------
-PDALK------------------------KLFKSFGLDRA-------------------
KVLKA-LQDVRGAQRVTTDNP-----E-ATYQ----------ALEKYGIDLVAQARKGKM
D--PVIGRDEEIRRTIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRILR--GDVPEGLK
D----KTIFALDMGALVAGAKYRGEFEERLKAVLTEIKQSEGRVLLFIDELHLIVGAG--
KTE-GAMDAGNLLKPMLARGELHCIGATTLDEYRKHIEKDAALERRFQPVVVDQPSVEDA
ISILRGLRERFELHHGVKIQDNALVSAVTLSNRYISDRFLPDKAIDLV-DEACAMIRTEM
DSM--P-QELDELTRRVLRLEI--EETALAKEKDEASARRLES-LRKELAEAREKAKAIR
MHWEKEKAAIGRTRKLREEIEAARLEMEKAERAYDLNKVAELRHGKIPQME----AELKK
LEQAGAGAT-LFKEEVSEEEIAEVVSKWSGVPVTRLVEGEKEKLLRLEEVLHQRVVGQDE
AVTLVTEAILRARSGIKDPRRPVGSFLFLGPTGVGKTELAKTLAETLFDSEAAMVRIDMS
EYMEKHSVARMIGAPPGYVGYDEGGQ-L--TEAVRRKPYA--VVLFDEIEKAHPDVFNVL
LQVLDDGRITDSQG-RTVDFKNTVIIMTSNIG--------SRYLLEGVSGSSIPDS----
----------VRESVMAELRKSFRPEFLNRIDETILFKPLTLEEITTIVDLLLADL-NKR
-LADRRVTVSLDAKAKEWTAEKGYDPVFGARPLKRFLQRNIETKLARALISG--EVGEDS
AVKFTI-----------KNDELVMAGKSSPIPAAAQR-----------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NZ_ACEZ01000226.1|c1|105600-108239|-|ZP_05536411.1|ATP-dependent_Clp_protease
------------------------------------MDMNRL-TQKSQEALQEAQTAAVR
MGQTEVDGEHLLLALL-D-QEDGLIP---RLLQGAGREP--EELRAAVREELSRRPKVTG
PGAAPGQVFVTQRLSRLLDAAEREAKRL--KDEYVSVEHLLLALAEEGS-----------
-ATAAG------------------------RLLKEHGITRD-------------------
SFLSA-LTQIRGNQRVTSANP-----E-VAYE----------ALEKYGRDLVAEARDGKL
D--PVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVR--GDVPEGLR
D----KTVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAAQGRILLFVDELHTVVGAG--
AAE-GAMDAGQMLKPMLARGELHMIGATTLDEYRKHIEKDAALERRFQQVLVDEPSVEDT
ISILRGLRERLEIFHGVKIQDTALVSAATLSHRYITDRFLPDKAIDLV-DEACARLRTEI
DSM--P-AELDEITRRVTRLEI--EEAALSKETDPASKTRLEE-LRKELADLRSEADAKH
AQWEAERQAIRRVQELRQELEQVRHEAEEAERAYDLNRAAELRYGRLQDLERRLAAEEEQ
LAAKQGENR-LLREVVTEEEIAEIVAAWTGVPVARLQEGEREKLLRLDEILRERVIGQDE
AVKLVADAIIRARSGIRDPRRPIGSFIFLGPTGVGKTELAKTLARALFDSEDNMVRLDMS
EYQERHTVSRLMGAPPGYVGYEEGGQ-L--TEAVRRKPYS--VVLFDEIEKAHTDVFNTL
LQILDDGRITDAQG-RTVDFRNTVIIMTSNIG--------SEHLLDGVTAEGEIKPD---
----------ARALVMGELRGHFRPEFLNRVDDIVLFKPLGEQQIERIVELQFDEL-RRR
-LAERRITVELTEEARELIAHQGYDPVYGARPLRRYISHEVETLVGRALLRG--DVQDGA
TVRVDV-----------QAGELVVTYDQAEDVKGAQAA----------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_013595.1|c13|4480199-4482805|+|YP_003339677.1|ATPase_AAA-2_domain_protein
------------------------------------MDVNQL-TQKSQEALHDAQTKALR
FGHTEIDGEHLLLALL-D-QPDGLIP---RLLTKADVDL--DRLVADLEAELSRRPKVSG
PGVDPGQVRVTQRLSRLLETAKREADRL--KDDYVSVEHLLVALLEEGS-----------
-ETSAG------------------------RLLRQQGLSRD-------------------
AFLRV-LTEIRGNQRVTSAMP-----E-VAYE----------ALAKYGRDLVADAAAGKL
D--PVIGRDSEIRRVIQILSRKSKNNPVLVGDPGVGKTAIVEGLAQRINN--GDVPDGLK
D----KTVFSLDMGALVAGAKYRGEFEERLKAVLTEVVAAEGRILLFVDELHTVVGAG--
AAE-GAMDAGNMLKPMLARGELHMIGATTLEEYRRHIEKDAALERRFQPVMVDEPSVEDA
ISILRGLRERLEVFHGVTIQDGALVAAVVLSHRYISDRFLPDKAIDLV-DEACAMLRTEI
DSM--P-AELDELTRRVMRLEI--EEAALAKEEDQASRARLEE-LRKELADLRAEADAMR
AQWEAERQVLRGVQTLREEIERVRTEAERAERDYDLNRAAELRHGKLPELERRLQAEEER
LLAKQGAGR-LLREVVTEEEIAMIVSRWTGIPVSRLQEGEREKLLHLDEILHERVIGQDE
AVRLVADAVIRARSGIKDPRRPIGSFIFLGPTGVGKTELAKALAAALFDTEDNMIRIDMS
EYQERHTVSRLVGAPPGYVGYDEGGQ-L--TEAVRRKPYS--VVLFDEVEKAHPDVFNTL
LQVLDDGRLTDAQG-RTVDFRNTVLIMTSNIG--------SIYLLEGVTPSGEIKHD---
----------VQEQVMAELRSHFRPEFLNRVDDIVIFKPLTPQEIEHIVELMFGEL-RAR
-LDERGIGLEVSEDARRYIAERGYDPVYGARPLRRFIAREVETRIGRALLTG--DVHEGA
VVRVGL-----------AEGELVVTYE---------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NZ_DS990628.1|c1|1435564-1438173|-|ZP_05065359.1|ATP-dependent_chaperone_ClpB
------------------------------------MNLEKF-TERSRGFIQAAQTIAMR
ESHQRLAPEHLLKALL-D-DDQGLAT---NLINASGGDA--AGVLQNVDIALAKMPTVTG
DAAQ--TFMDGTTG-KVLAEAEKLAKKA--GDSFVPVERILMALTMV-------------
-KSKAK------------------------DSLDAGKVTAQ-------------------
SLNSA-INDIRKGRTADTASA-----E-EGYD----------ALKKYAMDLTARAREGKI
D--PIIGRDEEIRRAMQVLSRRTKNNPVLIGEPGVGKTAIAEGLALRIVN--GDVPESLR
N----KSLLSLDMGALIAGAKYRGEFEERLKAVLNEVTEAAGEVILFIDEMHTLVGAG--
KGD-GAMDAANLIKPALARGELHCIGATTLDEYRKYVEKDAALARRFQPIVVQEPTVEDT
ISILRGIKEKYELHHGVRISDSALVAAATLSHRYITDRFLPDKAIDLM-DEAASRLRMEV
DSK--P-EELDQLDRQVMQLQI--EAEALRMEDDQASKDRLKK-LEGELSKVQEQSVSMT
AKWQAERDKLEGARGLKEDLDHARAELDIAKREGNLAKAGELSYGVIPQLEKQLGEA---
-----EDNDLMVEEAVRPEQIASVVERWTGIPVARMLEGEREKLLRMEDGLHKRVIGQDT
AVRSVANAVRRARAGLNDEGRPLGSFLFLGSTGVGKTELTKAVAEFLFDDDNAMVRLDMS
EFMEKHSVSRLIGAPPGYVGYDEGGV-L--TEAVRRRPYQ--VILFDEVEKAHPDVFNVL
LQVLDDGVLTDGQG-RTADFKQTLIILTSNLG--------SQALSQLPEGSDMVD-----
----------AKRNVMDAVRAHFRPEFLNRLDETVIFDRLARDDMDGIVTIQMSQL-LKR
-LASRKINLALDDGARKWLADEGYDPVFGARPLKRVIQRALQDPLAEMLLAR--DVKDGD
TVPVSA-----------GADGLLVGDRISVSNRPKPDEAVVH------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NZ_ACEB01000042.1|c1|63830-66376|+|ZP_03711722.1|hypothetical_protein
-------------------------------------MSSFKPTTKTQEALQTALQQASA
NGNPDIRPAHLLAAIL-G-QEDGIAA---PVLRATGVDP--ETVRKEAEALVKGYPKAEG
SGLA--NPNFNRDGLNVLNAAQELAGEL--GDEFVSTEVLLAAIAR--G-----------
-QSDAA------------------------DLLTKRGATYD-------------------
-AIKGVFPSVRGSKKVTTEDP------EGQFQ----------ALAKYSTDLTARAREGKI
D--PVIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVA--GDVPESLR
G----KTLISLDLGSMVAGAKYRGEFEERLKAVLDEIKEAEGEIITFIDELHTIVGAGAS
GD--SAMDAGNMIKPLLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDA
IGILRGLKERYEVHHGVRIQDSALVAAATLSDRYITSRFLPDKAIDLV-DEAASRLRMEI
DSS--P-QEIDELERIVRRLEI--EEMALTKETDAASHDRLVK-LREELADQRERLGELK
ARWNNEKAAIDKVRGVKEELEKMRQASEIAERDGDYGKVAELRYGTIPQLEKQLEQL-EQ
QSLAP----TMLSEEVTPDTIAEVVSAWTGIPAGKMLEGETEKLLHMEAELGKRVVGQLD
AVQAVADAVRRARAGVADPNRPMGSFLFLGPTGVGKTELAKSLAEFMFDDERAMVRIDMS
EYAEKHAVARLVGAPPGYVGYDQGGQ-L--TEAVRRRPYT--VVLFDEVEKAHPDVFDIL
LQVLDDGRLTDGQG-RTVDFRNTILILTSNLG--------AGG-----------------
----------TPEQMMDAVKKAFKPEFINRLDDVVIFDPLSKDQLTSIVDIQIRDL-AER
-LASRRLTLKVSDEAKEWLADRGYDPAYGARPLRRLIQQAIGDALAKKLLAG--EIRDGD
TVNVTVN----------TATDSLAVGK---------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NZ_ACSH01000028.1|c1|46467-49013|-|ZP_04837709.1|ATP-dependent_chaperone_protein_ClpB
-------------------------------------MSSFKPTTKTQEALQTALQQASA
NGNPDIRPAHLLAAIL-G-QEDGIAA---PVLRATGVDP--ETVRKEAEALVKGYPKAEG
SGLA--NPNFNRDGLNVLNAAQELAGEL--GDEFVSTEVLLAAIAR--G-----------
-QSDAA------------------------DLLTKRGATY--------------------
DAIKGVFPSVRGSKKVTTEDP-----E-GQFQ----------ALAKYSTDLTARAREGKI
D--PVIGRDSEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRIVA--GDVPESLR
G----KTLISLDLGSMVAGAKYRGEFEERLKAVLDEIKEAEGEIITFIDELHTIVGAGAS
GD--SAMDAGNMIKPLLARGELRLVGATTLDEYRKYIEKDAALERRFQQVFVGEPSVEDA
IGILRGLKERYEVHHGVRIQDSALVAAATLSDRYITSRFLPDKAIDLV-DEAASRLRMEI
DSS--P-QEIDELERIVRRLEI--EEMALTKETDAASHDRLVK-LREELADQRERLGELK
ARWNNEKAAIDKVRGVKEELEKMRQASEIAERDGDYGKVAELRYGTIPQLEKQLEQL-EQ
QSLAP----TMLSEEVTPDTIAEVVSAWTGIPAGKMLEGETEKLLHMEAELGKRVVGQLD
AVQAVADAVRRARAGVADPNRPMGSFLFLGPTGVGKTELAKSLAEFMFDDERAMVRIDMS
EYAEKHAVARLVGAPPGYVGYDQGGQ-L--TEAVRRRPYT--VVLFDEVEKAHPDVFDIL
LQVLDDGRLTDGQG-RTVDFRNTILILTSNLG--------AGG-----------------
----------TPEQMMDAVKKAFKPEFINRLDDVVIFDPLSKDQLTSIVDIQIRDL-AER
-LASRRLTLKVSDDAKEWLADRGYDPAYGARPLRRLIQQAIGDALAKKLLAG--EIRDGD
TVNVTVN----------TATDSLAVGK---------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_009480.1|c2|375588-377780|+|YP_001221056.1|ATPase_with_chaperone_activity,_ATP-binding
------------------------------------------------------------
-------------------------------MANMQ------------------------
------------------------------------------------G-----------
------------------------------------------------------------
APATDENAKT--------------------------------ALEQYGVNLTEIAKSGKL
D--PVIGRDAEIRRISQVLTRRTKNNPVLIGEPGVGKTAVVEGLAQRIVA--GDVADSLK
G----KQLVSLDLAALVAGAKYRGEFEERLKAVLKEIDDADGEVITFVDELHTLMGAG--
GGE-GSVAASNMLKPMLARGELRLIGATTLDEYRQYIEKDAALERRFQQVYVGEPSVEDT
VAILRGLKGRYEAHHQVPITDAALVAAASLSNRYIPARQLPDKAIDLI-DEAASRLRMEI
DSS--P-VEIDELRRAVDRMRL--EELALKREKDEASKARLAK-LREDVAAREQTLGELQ
RRWEAERASVNRVGKLKDELNELRIRAERAQREGNLEKASRLLYGEIPVIEREVAQA-EA
AESVPSAEDRMVNEQVTAEDVAAVVAAWTGIPVGRLLQGETEKLLHLEQELGKRLIGQKQ
AVRAVADAVRRTRAGISDPDRPTGSFLFLGPTGVGKTELAKALAEFLFDDEKAMVRIDMS
EYGEKFAVSRLVGAPPGYVGYEQGGQ-L--TEAVRRRPYS--VVLLDEVEKAHPEVFDVL
LQVLDDGRLTDGQG-RTVDFRNVILVLTSNLG--------SQFISDATLPLDQ-------
----------REQAVQQLVRQTFKPEFVNRLDDIVVFQTLSMDDLAQIVELYIDRL-GVR
-LSDRRLSLGVTPDARRWLAERGHDPLYGARPLRRLMQREIDDRLARELLAG--DIRDGD
AVRVDLA----------PDGDGLTVSRAWSDEPEDQAPGA--------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NZ_ACEZ01000137.1|c2|267934-270531|+|ZP_05533041.1|ATP-dependent_protease_ATP-binding_subunit
-------------------------------------MDAEL-TNRSRDAINAASNRAVT
EGHPDLTPAHLLLALLQG-QDNENIT---DLLAAADADQ--AAVRAGAERVLAGLPSVTG
STVA--PPQPNREMLAVVADAQTRAKEL--GDDYLSTEHLLIGIAAK-------------
-GGAAG------------------------EVLSQQGADAR-------------------
KLQDA-FQKTRGQRRVTTADP-----E-GQYK----------ALEKFGTDFTAAAREGKL
D--PVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVK--GDVPESLK
D----KRLVALDLGAMVAGAKYRGEFEERLKTVLAEIKDSDGQIITFIDELHTVVGAGA-
GGD-SAMDAGNMLKPMLARGELRMVGATTLDEYRERIEKDPALERRFQQVLVAEPTVEDS
IAILRGLKGRYEAHHKVQIADSALVAAASLSDRYITSRFLPDKAIDLV-DEAASRLRMEI
DSS--P-VEIDELQRAVDRLKM--EELAIGKETDAASRERLEK-LRRDLADKEEELRGLT
ARWEKEKQSLNRVGELKERLDEIRGQAERAQRDGDFDTASKLLYGEIPALEKELEAASEA
EEEVAK--DTMVKEEVGSDDIADVVASWTGIPAGRLLEGETQKLLRMEDELGKRLIGQTE
AVRAVSDAVRRSRAGIADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMVRIDMS
EYGEKHSVARLVGAPPGYVGYEEGGQ-L--TEAVRRRPYS--VVLLDEVEKAHPEVFDIL
LQVLDDGRLTDGQG-RTVDFRNTILVLTSNLG--------SQYLVDPVTSEQE-------
----------KKEQVLEVVRTSFKPEFLNRLDDLVVFAALTKPELERIAKLQIDRL-AKR
-LAERRLTLDITPEALAWLAEEGMDPAYGARPLRRLVQSAIGDRLAKEILSG--EIKDGD
TVRVDR-----------SEDGLLVGPATGKTL----------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NZ_ABYX01000147.1|c1|188541-191132|+|ZP_04710091.1|putative_ATP-dependent_protease_subunit
-------------------------------------MDAEL-TNKSRDAINAATNRAVK
DGHPDLTPGHLLLALLEG-QDNENIV---DLLAAVEADL--ALVRGETERLLGGLPSVTG
STVA--PPQPNRELLAVIQDAAQRAKEL--GDEYISTEHLLIGIAAK-------------
-GGRAG------------------------EILDGQGAGAK-------------------
KLLAA-FETSRGGRRVTTPDP-----E-GQYK----------ALEKFGTDFTAAAREGKL
D--PVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVK--GDVPESLK
D----KRLVSLDLGAMVAGAKYRGEFEERLKTVLSEIKESDGRIITFIDELHTVVGAGA-
GGD-SAMDAGNMLKPMLARGELRMVGATTLDEYRERIEKDPALERRFQQVLVAEPSVEDT
IAILRGLKGRYEAHHKVQIADSALVAAATLSDRYITSRFLPDKAIDLV-DEAASRLRMEI
DSS--P-LEIDELQRSVDRLRM--EELALKNESDAASKERLAK-LRRDLADKEEELRGLN
ARWEKEKQGLNRVGELKERLDELRGQAERAQRDGDFDAASKLLYGEIPGLERELEEAAEA
EQEASKDKDTMVKEEVGPDDIADVVGAWTGIPAGRLLEGETQKLLRMESELGKRLIGQTE
AVQAVSDAVRRTRAGIADPDRPTGSFLFLGPTGVGKTELAKALADFLFDDERAMIRIDMS
EYGEKHSVARLVGAPPGYVGYEEGGQ-L--TEAVRRRPYS--VVLLDEVEKAHPEVFDIL
LQVLDDGRLTDGQG-RTVDFRNTILILTSNLG--------SQFLMDPLVKPEV-------
----------KKQQVLDVVRASFKPEFINRLDDLVVFSALSGDELAHIAGLQIDRL-AKR
-LADRRLTLDVTPEALAWLAQEGNDPAYGARPLRRLIQTAIGDRLAKEILSG--EVRDGD
TVRVDR-----------AEGGLIVGPAS--------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_012660.1|c2|2750342-2751307|+|YP_002872126.1|putative_ATP-binding_protein
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------MRFT---FEPAQVMAL-------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------------LRSRIVGQEA
ALAQVEGLLKVVKADISERDRPLSVNLFMGPTGVGKTEIVRLLAQALHGRADGFCRIDMH
TLAQEHYAAALTGAPPGYVGSKEGIS-LFNSELIQGTYSRPGIVLFDELEKASQEVVRSL
LGILENGQLTLAGGTRTLDFRNSLIFMTSNIG---------AQQARRHRLRFTQGW---R
RLLRVFVRG-EAQVLEEALHGHFEPEFLNRIDRILMFEPIDAQWLEALLAVELDKL-NQR
-LAVQQRSLVLDAQARAWLCR-QHDLRFGARALARRLRVELEPAIAECLL-----QGNAR
HLSATV-----------RNACLVVEPESTGR-----------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
>NC_006361.1|c4|814372-815415|-|YP_116964.1|putative_ATP-dependent_protease
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------M-----------
------------------------------------------------------------
------------------------------------------------------------
---P--------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
---------------------------------YLTDMFHDQNGSR--------------
--R--PAPD---------------------------------------------------
------------------------------------------------------------
-------------------------------PAPATGFDR----QALAARLGSAILGQPA
AVEAVVRAVTLAHVGAADPHRPRAAILLVGPTGVGKTELVRQTAAALRSGPDDLCRIDMN
ALAQEHYAASFTGAPPGYAGSKESLT-LFDKATIEGDPYTPGLVLFDEIEKADATVIRAL
LHVLDTGELRLANGKERISFRNSFVFLTSNLG--------SAQVARRLRGGPLRRW---R
GTDRAS----THAIVRRAVENFFDPEFFNRIDETIVLDPLDTDTAVRVAALEIDRL-VAR
-LGRRGVRLRCDATVAPALAACGFDPVYGARGLRRHLRVFLAEPVADAILC---HRTPGS
EVTLCARV---------VQGRVVVTAAGDVSG----------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------
