>AY263398.1|c1|33717-36299|-|AAP92511.1|transcriptional_regulator
------------------------------------------------------------
----------------------MRRA-----------------------------G-RRR
VPGFSGEGGIGKTALLDEIQAMAADR----------------------------------
-----------CTVWSGRGGETVTSVPFHVVRQLLQPA-LDQFPPDETRALFGDWFEIIA
PALGLAE-------------------------------PS----------GPQPDPQGVR
DGLDYVVGR-----LASRLSHRPLLL-----------------------IVDDAHWADGE
SLAWLASFTA-RLGELPVLV--VQA--------HRPQEMAERNAGYVADRAAERDSHGQE
KVTRVALRALTPDATAV-LV----------RSALGEHADDP---FCREVWAVTGGNPYEA
VELVAKV-----QDH---------------ELPPVEESAGELR------ALGASA---RG
SGLVARLERLG-TNANR----FAWAAAVL------GTD-ISQEL----AATLAGMSPAEA
ADCTARLRDARIV---------SGFDPLEFVHPLIASAVY---RSIPSATRTAMHGRAAW
AITRA-GLGPAAASRHLLEV--HP------DDDQELVAQLREAARQHLAVG-APEA----
-----ARRCLERALEEPPR------PKDRA------------------------------
---------------ALLYELGCATLLSSPPTTVQHLRAALDMPGLDD--GLRVDATFRL
A-AALAHNN--QLK----EAALALAAEAARTDPGPG-------LMRLQAAHFMWEGMQAV
ED----------------------------------------------------DGPTRS
RRLTRNADHLKGRDNAERALLTLRAFDGMLRG-------------------------ENA
QLIVDLCERALVDGSPARGLGWTDTEWGFELPTMVGITYSFVDQLDRAESLFGEAVRA-F
EIS-GWSGAHLAFAHTLLGMVHRRRGRLAEAEGFLREGLRLADRVGSGL-PV-HWDATCL
LIDTLLARGRTEEARSIADRYH--FGPPYPSAMVLPD--GPCIRGRL-LLAEGRTKEAIA
ELEAAGAALEARERFNG-I------WAPWAADLARALVD-EDPARAAHLAARNRVHAERL
GTPTAMGEALRCVA-LFAPPERSAELLAEAVGHLEKSTSGYEHALARFEY--------GA
AIGSHRELARAQKQAMTC-G---AEGLAARAQ----------------------------
------------------------------------------------------------
----------------------------------------------QARASIRSSE----
----------------------------
>AJ843080.1|c1|28177-30837|-|CAH58704.1|putative_LuxR_regulator
------------------------------------------------------------
-------MLPSRAEHRPPAPLLEREP--------ELAAAAHAVEALTGP------GATGG
LLVFRGEAGIGKTTLLAEIGRRAAGR----------------------------------
-----------CTVLSGKGGETVTSVPFHVLRQLLVPA-LLPLPEARLRELFGDRFDLTA
PALGLAA-----------------------------------------PSAPLADPRGVR
DGLDRVVAR-----LAEERRAQPLLV-----------------------LVDDAHWADTE
SLHWLAEFAD-RLPGLPLLI--VLA--------HRA-DAAAERPEP---APALLRRLDRQ
ARLTSTLRALTEDATAD-LA----------RAALGDRTDGP---FCREVWAVTGGNPYET
VELLATV-----RDR---------MLEPVARSAGRLRDLGASA---------------RG
SGLVARLEGLG-TAATR----FAWAAAVL------GTD-IPLKL----AASLAGLPADEA
AVCAARLREARIV---------TGSDPLEFAHPLVATAVY---RSIPPAARTALHGRAAW
AVTQE-GLGPAAAARHLLEV--HP------DDDPELVGQLREAAREHLAVG-APDA----
-----ARRCLERALQEPPP------PDAYA------------------------------
---------------EVLYELGCAALLTSPAATVRHLRSALDLPGLAP--DLRTDATYRL
G-QALAHSN--ELG----EASATVAAEAARIPPGR--------ARTRLEAAHLMYESFRA
TED---------------------------------------------------DPHGRS
RRLAARADHLAGDGDAERALLSLRAFDAMLRG-------------------------EDA
ALVLDLCDRALLDGRPAPGVSWTDTEWGFETPAMIGIAYAFTDRPDRARDLFEEAVRA-Y
EIS-GWSGAHLAFAHTLLGLAHRRAGDLTRAEAFLREGLRLADRAGRGL-AV-QWDAVCL
LVDTLLARGRPGEARELADAYA--FGPPWPSAMVLPD--GPCVRGRL-LLAEGRTREAAD
ELEAGGRASEARGRHNG-I------WAPWACDLARA-LAPDDPGRAAALAGLAGTHAERF
GTATARGEALRCAA-LFAAPGEAAGLLAEAVRLLESSPSAYEHALARHDH--------GV
ATGSRAELSRAAALAAAC-G---ADALAARAH----------------------------
------------------------------------------------------------
----------------------------------------------RALSELPAR-----
----------------------------
>AJ629247.1|c1|36726-39386|-|CAF33326.1|putative_regulator,_NeoR
------------------------------------------------------------
-------MLPSRAEHRPPAPLLEREP--------ELAAAAHAVEALTGP------GATGG
LLVFRGEAGIGKTTLLAEIGRRAAGR----------------------------------
-----------CTVLSGKGGETVTSVPFHVLRQLLVPA-LLPLPEARLRELFGDRFDLTA
PALGLAA-----------------------------------------PSAPLADPRGVR
DGLDRVVAR-----LAEERRAQPLLV-----------------------LVDDAHWADTE
SLHWLAEFAD-RLPGLPLLI--VLA--------HRA-DAAAERPEP---APALLRRLDRQ
ARLTSTLRALTEDATAD-LA----------RAALGDRTDGP---FCREVWAVTGGNPYET
VELLATV-----RDR---------------MLEPVARSAGRLR------DLGASA---RG
SGLVARLEGLG-TAATR----FAWAAAVL------GTD-IPLKL----AASLAGLPADEA
AVCAARLREARIV---------TGSDPLEFAHPLVATAVY---RSIPPAARTALHGRAAW
AVTQE-GLGPAAAARHLLEV--HP------DDDPELVGQLREAAREHLAVG-APDA----
-----ARRCLERALQEPPP------PDAYA------------------------------
---------------EVLYELGCAALLTSPAATVRHLRSALDLPGLAP--DLRTDATYRL
G-QALAHSN--ELG----EASATVAAEAARIPPGR--------ARTRLEAAHLMYESFRA
TED---------------------------------------------------DPHGRS
RRLAARADHLAGDGDAERALLSLRAFDAMLRG-------------------------EDA
ALVLDLCDRALLDGRPAPGVSWTDTEWGFETPAMIGIAYAFTDRPDRARDLFEEAVRA-Y
EIS-GWSGAHLAFAHTLLGLAHRRAGDLTRAEAFLREGLRLADRAGRGL-AV-QWDAVCL
LVDTLLARGRPGEARELADAYA--FGPPWPSAMVLPD--GPCVRGRL-LLAEGRTREAAD
ELEAAGRASEARGRHNG-I------WAPWACDLARA-LAPDDPGRAAALAGLAGTHAERF
GTATARGEALRCAA-LFAAPGEAAGLLAEAVRLLESSPSAYEHALARHDH--------GV
ATGSRAELSRAAALAAAC-G---ADALAARAH----------------------------
------------------------------------------------------------
----------------------------------------------RALSELPAR-----
----------------------------
>NZ_DS570423.1|c2|48639-51224|-|ZP_05000814.1|transcriptional_regulator
------------------------------------------------------------
------MSYATEPQGWASQPLLERES--------EVLAIHRAVDELCGTPDSSQPSRRGG
VLTFAGSAGIGKTSLLTEARRHAAER----------------------------------
----------HCTVLFARGGEQERQVPFHVMRQLIQPA-FAAMTEDERRDVLGTWYGIVA
PALGLTA---------------------------------------APEGLTAPDPQGVR
DGLDWVVTH-----LT--VRSAPVVL-----------------------VLDDAHWADAE
SLAWLTAFAA-RAEELAMLI--MVA--------CRP-DEIPADAGS---LRALIKRQGT-
RPH--ELAPLTTSAVAR-IV----------RDALGDNADDV---FCRECWAITGGNPFEV
VELAMKG-----RDR---------------GLKPHQDSIPQLR------DLASAV---KG
SGLIDRLEQLG-TSTVR----LAWAAAVL------GTA-VPISI----VGGVAALGEAQA
ADAIAQLRDARILTVLTSLRRQEVV-EF--FHPLIATAVY---RSIPPGVRVAMHGMAAQ
ALVDD-GFGAAAAARHLLEM--HP------EGDPWVVQQLRQAARDSFSAG-APDA----
-----ARRYLARALREPPD------AEYRA------------------------------
---------------EVLFELGSANLLHDPATTINQLRAALEEPKADQ--ELREAITYRL
A-QAMAHTG--QLA----EAAGLLSDEAKLATSSRT-------RLRMQAEQFKWNSVRMD
EA----------------------------------------------------NSPARS
RLLAQFAKRLTGRGVPERHILGLRAWDAAMRG-------------------------EPA
ATALEYAEQALDGGM-----NWTDQDFGFEVPAVVAVTLMYCDQPGRAEELFNAGIME-F
ESK-GWRGAHLSFVYTLLGYVRFRRGRLAEAEDFVRNGLQIAERVGHD------------
------------------------IPGAVVRGGHAHR--DAAGPGQYGGGAAGRPRVQAG
GGLPAGGRLPRSAGGVGQA--------------------------------------PAG
AGADRRGKAAPLRGGQAAGSAGNAQSVLESLA--ARPGPRPDREGARAGACHGGRGG-GP
GPGVRDVERDRARPARVG-G----------------------------------------
----------------------------------------------------DPGRVPGD
GL---------VAGGGEPPRTVPGRLRTRPCADRSRYGPAHHR-----------------
----------------------------
>NZ_ACEZ01000042.1|c1|18038-20929|+|ZP_05529796.1|putative_transcriptional_regulator
------------------------------------------------------------
------MAHGLRQPITEHRPLLERDE--------ELLAIDRALAELRDTVDGMHRVPRGG
LLAFTGEAGLGKTTLIAAARARAAAQ----------------------------------
----------GFTVLSGKGGENEQGLAFRVVRQIMQPT-LAAMSETERRRFLGSWYDIVG
AALGLEA-------------------------------TD---------PARVPDPTGVR
DGLDWVMTR-----LT--MTNAPVVL-----------------------LLDDLHWADTE
SLDWLASFAP-RVADLPLLV--VVG--------YRPNELPRDATSF---RTLVERHEQR-
PHV---LSPLGETGVAR-II----------RDAVGEEAEDE---FCGECWTVTGGSPFET
VELAIRL-----RER---------------RVRGTRAELPVMR------HLAAAI---KG
PGLIERLKRLG-PSTVR----FAWAGAVL------GGP-FSPEA----AAGLAVVGSAEA
AEATEKLRACRILTDAEEP---VGSLEF--VHPLIATTVY---RDIPSGLRVGMHDAAAH
TAQTV-CSDPTTAARHLLEV--PC------DDRPETVACLRAAAREYLRSG-APEA----
-----ARRVLTRALREPPP------AEDRA------------------------------
---------------ALLHELACSTFLIEPTATVNHLREALKRPGIAP--ELRASVVYRL
T-QALAHTD--RLT----EAATVAADEARRTTNPRV-------RLRMQADHFVWSAFRAD
EP----------------------------------------------------DSSARS
RRLARLADKLTGRGLEERYILGLRAWDALVRG-------------------------EPR
RTALEYAEEALRGGM-----SWTDENRGFEVPVAVALLFMYCDQPGRAEELFTRGMAE-C
ERM-GWRGSHLAQGQTLLGYIRYRRGCLPEAEELVRAGLHTAERVEGAV-PA-QWFAIGI
LIQILLARGRTTDARRLADTHH--YGDVVPNAVIFPD--PRTVYAEL-LLAEGRLAEAAS
LLSEVGDWLESRDWHNP-A------WCPWQLGLASA-LARTAPDQAVLHAQDAVKRARDF
GAASAIGQALHVQA-EVTGGQAALELHTRAVDHLERSPAAYELARALVGHGAALARA-GR
LHDAADRLYQGLEGAVHC-G---AAGLADRAR----------------------------
---------------REL--------------------------SAAGMRPLPLRYAQTD
MLTAQERRAAEMTVQGHPASVIATDLRLTEQGVRHLLSSVYRKLGTDA-SGLPGALGD--
----------------------------
>NZ_DS570789.1|c1|87057-89876|+|ZP_05010221.1|transcriptional_regulator
------------------------------------------------------------
------------------------------------------------------------
-MVFAGPAGLGKTTLLNEVRRRALAR----------------------------------
----------GCTVLSARGGEQEQGVAFHVVRHLVQPV-LAAGSEEEHRRTLGSWYDIVA
PAVGLVA-------------------------------GA---------GNSSPDPQGVR
DGLDWIATR-----FA--VQHAPLVV-----------------------MLDDAHWADAE
SLAWLTGFAP-RVTELPMLL--VVA--------YRP-DELPADALA---FGKLAERHGS-
RPF--DLAPLTPGAISR-IV----------RDALGEDADDA---FCRETWAVTGGNPFEA
VELAARV-----ADR------------------GLKPQLAHLP------ELRELASAVKG
GGLVERLERLG-PSAVR----FAWGAAVL------GAE-ASRSR----AASVGGLGDAES
ADAVTKLREARILADPARDGNEEDDDRLEFFHPLVSTAVY---RAIPAAFRVAMHGQAAA
VISHA-GLGATAAARHLLET--HP------ESDPWVVQQLSEAARDYLRAG-APDA----
-----ARRCLTRALREPPA------MEDRA------------------------------
---------------QVLFDLGCSALLTEPAITVNHLRAALDEPVLDP--ALREAIVYRL
A-QALGHSD--RMA----EAARTVADAARWATDART-------RLHMQAEQFMWNAFRAD
EQ----------------------------------------------------DSPARS
RKLARLAEHLTGQGTAERYIMGLRAWDAMVRG-------------------------EPA
ATALEWAEKALGDGL-----PWTDEQWGFEVPVLVALTFMYCDQPGRAEELFQKGIAE-C
QDR-GWRGAHLSFGYTLLGYIRYRRGRLDSAETLVRDGLRIADRVGHRV-LA-QYFAIGI
LIEILLARGRTEEAEEIATTYH--YGDIVPSAVVYPD--SQTVHSEL-LLALGRRREAQQ
QLVRVGERLEPRGMRNP-A------WCPWQLHLARAKAAT-DPEKARELAAEGVRRARRF
GTPSAVGQALHAMA-EVSPVAERVALLAEAVAHLECSPSGHDLASALIDHGVALRRS-GL
PQDAAEQLHRGLEGAVQC-G---ADALVSRAR----------------------------
---------------EEL--------------------------DATGMWPLQPRTAAAD
SLTVQERTVARWAARGWSNARIAEALGTPDPVVTRLLSDIYLKVGCD-QTGLPRLLEGPD
SDTYAGPGPSGGPAES------------
>DQ630728.1|c1|19727-22615|-|ABG02267.1|SalRI
-----------------------------------------------------------M
TVVTGERSPHGSGKTGAPPELVERER--------ELSVLTEAARRAAA-------G-SPG
LIVLEGPDGIGKSALLRALVGAAPAL----------------------------------
------------HVLTARAEPEQQQTPLSLARRLVAPLAEAHRADPALPWPVHPEKSADP
TARGKSD------------------------------------------IDVNAVPHGLL
AELYELLRS-----AA--T-HRPLLL-----------------------AVDDAHLADPA
SLHFLAHTAR-RLPGQPVLL--ALS------------CRGGHASAS---LDEIAAQPQC-
RTL--RPRPLTAEGIGR-VA----------QALTGSAGDAQ---FQGSCLAVTGGNPLLV
TRLVSAL-----REN------------------GLDLTVENIT------AVDGQGAQSFR
SRIAHLLSQQP-DSVLR----AVRAMAVL------GDG-TPTDL----CGRLATLDEPAF
AQSLFTLNSLGLVGFT------AGAGAWSFTHPVVREAVL---DGIGDREGGAAHGRAAR
LLHDS-GAPTAEVIAQLLRSQ-GT------PTEPWATTLLREAAREAMLAS-RPER----
-----AVELLRPCVPEGRE------NECSP------------------------------
---------------ALLTELGVAEGRVDPEAAVGH-LTVALKRAIDP--ELRLTALSAL
A-VGLARTG--QLA----RAVGLLNRHRTTGAEDGV-------ASAQLLEAQLLMAVIGS
R-----------------------------------------------------EAYLEL
IDTVPLDLDLPGETPAERVLVATRAVLVASRM-------------------------DRV
PECLAATRRAWQRSS-----PTTDS---YAFLATAATSLLYTDAPREAEDVFRQLI---H
GGE-TLPEDECRNALGLSADACLRLGSLEAALKSATRALKDTDLAAVS--HH-QALALAI
RLHVFLEQGDLDAASAAVAGSP---DPKDEDAWQWNE--LLGAHGRL-RLAQGDAEGALA
LLTECGRRQRAWQRTNP-A------VSPWWYWAGQAHLALGQHAEARELADEAIGLARAG
QLPCALGTALELRAAAVRDPRERAALLEEAEAVLAPTGAELILARVRVSRGRALYEL-GH
KEAAREVLRKGWNASYAA-G---ARALHEEAR----------------------------
---------------KAL--------------------------LATGARPRRPVSRGLG
SLTRSQSQVARLAAEGASNAEIAETLFVTQRTVEVHLTSAYRKLGVSGRRELRGALRPPE
EGTRPKPGRPA-----------------
>DQ272521.1|c1|4450-7353|-|ABB88528.1|regulator
------------------------------------------------------------
-----MLMTTAAEGGELGRADHGRAAGPPVDRDGELAVLSAAVRDAAA-------G-RPG
LVVLDAPDGMGRTTLMNGLLLEAHAA----------------------------------
----------GLRVLRADGAAAGHTAPLSTVRALLEPL-SDGATRRPSARHPTAPPDEEP
PKRDELP-------------------------------RS--------DVRGGDVPHGVL
DALHRVVRR-----AG--R-ERPLLI-----------------------AVDDAHAAEPA
SLRFLAHVAR-RLAGLPVLL--CVA------------RRSGGGSPL---LDEIAALPMC-
RVL--RPLPLTPGGTSL-LA----------RRLTGRDVDAG---FGAACRAATGGSPLLV
THLLTAL-----RDA---------------RLPPTQDALAALG------TQALGG---FR
ACVVRLLDGQP-TTVRR----AARALAVV------GDG-TPRET----CARLAALDPGVF
ERCLTALGALGLVDART-----DGG-TWSFAHPQVRAAAV---TGVSSDEKSLLHGLAAR
LLHES-GADVTEVAEQLRQST-ES------ATRPWARAVLREAAREMTLQG-LPDR----
-----AVELLRPCVPPGHE------GTCEP------------------------------
---------------ELLLDLGLAESRVDPSAGAAR-LAVALDRLTCP--QARLTALNAL
A-GALMRSG--EVS----RATALIDRCREYGTDSAASA-----SSAQLLEAQLLLVATGH
R-----------------------------------------------------ATYSRL
LDSTSLDLGLPGDTTARRALLASRAVVCAARA-------------------------DRV
AEARDAARTVLAHGT-----PVTDA---VSTLGTAASVLLYTDRPRESAEAFRQLLDA-P
HVT-REEAYPTLL--ALTAEAHARLGALGEALRTTAAALEGVAPARAA--RP-AALPLAV
RLHTLLDQGDLAAGTALVQDLP---GPLDDEAWQWNE--VLCARGRL-RLASDDVEGALD
DLTECGRRQRAWHRTSP-A------VSSWWYWAGRSHLARGDRATARQLADDAIESARAA
HLPCALAQGLELRA-ATEAARHRPLLLQEAEAVLATTSAALLLARVRVARGRALYRC-GD
KQAARAVLRKAWEETYAL-G---APALHAEAH----------------------------
---------------AAL--------------------------LATGARPRRPVPSGVE
ALTRSERRVAKLADSGLTNAVIAKTLCVTRRTVEVHLTAVYRKLNVAGRRELRFVLRAAD
EGAPHAVGA-------------------
>EU108007.1|c1|114555-117332|+|ABV83234.1|CppRIII
------------------------------------------------------------
--------------------------------------MRDAVTRAAD-------G-SGA
AVVVGGGVGSGRTALLDAVGVAAGRA----------------------------------
----------GLTVLRAASALVERDFEFGVPRQLFDPL-LAAAGADARTRWLAASRPRLP
AALAAEP-------------------------------LD---------PAETHEEQDRV
RELQALLAT-----VG--A-ERPVLV-----------------------LVDDLQWADTA
SLRWLNRLVA-RIPDLPVSF--VGT------------TLHGDPGAG---RPPVRGLAGSA
VPL--RSRPLGPAAVRG-MV----------AGRFGRAGDPE---FLQVCEEVSGGVPSVL
RAVLDEV-----VAA----------------GGGPVAACIPAV------RSARPAG--LR
ERFARCLRAQD-DAARR----YLGALAVL------GPA-ADPAV----VARLAELDPHGL
RAVQGQLTEQGLLT-D------DHT-GF--THPLVRDVAA------DPAERERLHLRAAR
LLHET-GHHAQEVAAHLLAV--AA------PLDGWAVEVLRAAAHQTTTAL-RPDTADDH
DDDPVAVRYLRRALLDSDV--R---GHERG------------------------------
---------------ALLVELAAAERFTEPGTAVRH-VSQALPLLASP--QDRAVALTLI
D-PSTVREVPARVQ----EAVRAADAGTDPVVDDECT------VAVRIRARARRLDEQHP
EGL---------------------------------------------------ARSCAL
LREVVAAPDEHLSTAAGRELVGVLLHAAALTG-----------------G-------VPA
ADVAHLGERLLRITPAREVRPPHGIPPGDGPRGLLVLALVAADRPRPLEDWLV-------
----PDPTSPAAATADELALVLLARGRPAAAAALPGGVL-----------RE-RGVPASA
AFHTALIAAAIEARAPALGPEPAGRPPGGGLVAHATH---QLVRAAG-ALRAGRQDLALE
CLLDCGRHLEHLGWSNP-A------LFPWRSWAARLLRRRGATGAALEWADEELALARAW
GAPAALGRALRVRG-SLVGGAAGATQLREAVEVLRDSADTAALGRAEIVLGRHLAGT-GA
PEGEALLRRGLRRLEEAGAGDPDTATPVPTVE----------------------------
---------------PAA--------------------------GTGDDGEESPAWRVVD
ALTDAERQVVDRVVGGATNKMIAEELGVSRRAVEKRLTSAYRKLGVSGRSALRGAD----
----------------------------
>DQ176871.1|c1|6203-8713|+|ABB05095.1|LipReg4
------------------------------------------------------------
------MTQLKRRGLFSLDLLIERKD--------EISALRGLISDGRA-------G-NGR
ITVVSGATGSGKTALLQQAAECAVEQ----------------------------------
----------GSVAVNVTCSPLERDVPLAVVRQLFDALPLGPQPARQVADMLAEGVQAGL
GEIVTTI---------------------------------------------TPAHARVA
EALWGLLVA-----FS--E-RIPVVV-----------------------LIDDVRNSDAL
SLVYLLYFIR-RVRPTCIAM--VLS--------DTE-DPQPRFPLF---RAEIMRLPEL-
SHI--RTAALSPTGVTE-LL----------AGRVRADKAGL---LGAEFHNVSGGSPLLL
KSLLRDL-----ADS---------------ASQPPEQCAPVVG------EH-------FA
QAVVSCLRRSG-PTMLV----VAQWVALL------GES-TCKEL----LAECLGTSPESA
HRLLRMLDTIGVT---------RAG-RF--RHPAARVAVM---DGISEQNRAEMKFRVAR
MLYDT-GAPATQVAGHLLGQA-GQQAGLCTEQAAWAVSVLREAADRALTGN-RVEQ----
-----AIAWLRQAHRLCTD------KAERG------------------------------
---------------AVLFHLARIQWRHSPTAALRC-LDQVTKPFVHE--RFGTPYTLLL
I-RYLLRSG--RHQ----EAQKILHRLHRDADSLPDE------VCAELRLLEMWLAVSFP
AV----------------------------------------------------AEHFPY
DHSLVVRRSGPVTGRDELQWQAARLLVGVLGG-------------------------GVD
GGFISEVEQALRLYQ-----VAEAT---LEPLVMGLSALIFADRLAGAGSWCASLMDD-V
ETL-DAPAWRAALS-ALRAEIAVRQGDLKGAVRLAGQALDDIDAEGWG--VE-IGVPLST
MVLAHVAMGRTEEANALL-QLP--AADPMHESRYGLQ--YRYARAHH-HLAADRPHAALR
DFLDCGTLMRRWNLDAP-G------LALWRVGAAEALLLLGEQARAKSLMDEQWALLAGK
RTTRSAGMALRVCA-AVTRPDRRPALLRQSAEILQGCGDRYVTGQ---------------
------------------------------------------------------------
--------------------------------------------DDGGPRPRARGPR---
------------------------------------------------------------
----------------------------
>DQ272521.1|c1|1731-4466|-|ABB88527.1|regulator
------------------------------------------------------------
-------------------MLWERET--------ATAAAEAALRRAAR-------G-RGS
LLLVEGALGAGKSAFLDSLTSLSDRH----------------------------------
----------GALVLAAHASPGEEGFEYGVVRQLADTC----------------------
PPVGPRW----------------------------------------------------P
ADSFAALVD-----VA--APGRPLVI-----------------------TVDDLHWCDAA
SLRSLVTLLAHGVPGGVVLV--VSV--------LSG-HVRVGRPRL---RAVLARAT---
STV--DLCPLGPRSVRA-LA----------DAAYGTPVEEP---FARALHTASGGSPLVV
HGLLDEA-----------------------VYRGLEPAGAHAQ------AVAALRPDRVR
RRLASFLDTQP-ADVRR----AAHALAVL------GTA-ADPPL----LDSLAGLTGPAR
ARAVAVLHRSGLV---------GGDGSV--LGSLLRDLLA---EALPADQRSALHGAAAG
LLYRA-GYPAETVAEHLMAV--PA------LHGGRTVALLRAAADSALHRG-SPRS----
-----AARYLRRALMNVPSA-----DPERA------------------------------
---------------HLLVDLATAERSFAPAASLRH-VVEALPLLPDA--RERAAALVRL
G-PLHLDPAAFRIRSTFRRLIHDLRRCPPAERPSTISEKADRDLLLRLRARAYVLSTDDR
------------------------------------------------------DAHAML
SAFQGLGPDPATRTPGEREMAAFLIHHALVTNS------------------------APA
RRLAALAARLLQREP-----AAPDR--IHTVLPLALNVLAATGHPGDAAAWLRAAAPA-A
ARQ-GAEAELVVIR-ATQALVALAAGRPGRARREAQ-AIEAAAEGGDG--DL-PPVCLAA
VALIALDTEEPERAERVLARHP--LHAEDPRLTALLH----AARGAL-SARGGDPRTALH
RFRTAGHVLERIGWRNP-V------MLPWSGCAALMHHRLGEDKEAVTAARQDVERARAF
GAPLPLGRALGVLG-RVTAGRAGTERLEESVAVLEQGSSPYELSRALHALGGRPE---QD
PARRLALCRRALELAVDC-G---APWLADRVR----------------------------
--------------------------------------------RRLDDTRAETAASSAD
HLTPSERRVARLAASGLSNSAISLRLGISSRMVERHLTQSYRKLDIPGKTHLPYALEGAP
AEPAE-----------------------
>DQ630728.1|c1|16261-19086|-|ABG02266.1|SalRII
------------------------------------------------------------
------------------MLLLERDD--------LRDEAAATLRRAAA-------G-EGS
LLVVQGALGVGKSTFLEALSELGREE----------------------------------
----------DTLLLRAQAAAAEESFGLGVVRQLVEPV-LAAASTEQARSWLRAAAEGAP
PEVRAIA------------------------------------ESGLEAPWSALTVQGAP
RWLAALVDA-----MA--G-GRTVLV-----------------------IIDDLHWCDAE
SLKVLIHTLACRGGMRIVFAVSVLT------------GDVRGNRCY---VHDVLALAD--
RTC--VLRPLGGDSIRR-LV----------EESCGAPAEPE---YVEAFRVRTGGNPLLL
GALVDEA-----------------------QFRGLRPTAAQAP------MVSLLRPENVR
QRLAGFLRSQP-DHLRR----AAHALTVL------GPD-SDPEL----LADLAELDSAQC
AEALRVLRLAGLV---------AEDGWTLSTGSLLRDLLE---ESMPAEERTAMRSVAAE
LLHRS-GHSAELAANHLMST--LT------LPGDKAVDILRTAARSALHRA-STRD----
-----AARYLRRALLETSLT-----GPDRA------------------------------
---------------GLLIELAGAERSFATAASLRH-VVEAVPLLDSV--RERAAAVVRL
G-PLLMDPSAFRVDAMMREVAEELAASGTKGPEERE-------LALRLQAREHVLSAQDP
A-----------------------------------------------------HIAEAV
RRFEQLGPHPSMDTPGERELLTALMHIVFVANA------------------------VPA
ARLSALCARLLEQEP-------PSFEHVHSTLPLVVNILAASGQTEGAASWLRESHRL-A
QHR-GGDVEQAIIR-AEQALVAFADGQPVYARRRALQADALTGPETSG--LP--TMLVAV
LAIVALNTADPALAESILVQYR--RSAGNEHLSALLH----VARGTS-AVRRGELRPALD
HFRTAGLHMERIGWRNP-V------ALPWPSCVALVHHRLGEHEQAKAAARQEVEQARAW
GAPTALGRALLALG-RVSEEREGSAILEEAVAVLEQGTNGYELCRALYALGSHAE---TE
PARRANALKRAQELALEC-Q---ADWMLTRI-----------------------------
--------------------------------------------QSLQSEAPPAAVRKKS
RLTPSERKVAGLAATGQSNPEISGELGISSRMVEKHLSNTYRKLDIPGRPSLAAALAELD
EEA-------------------------
>NZ_ACEX01000063.1|c1|13272-16022|-|ZP_05512326.1|LAL_subfamily_transcriptional_regulator
------------------------------------------------------------
------------MTEQDGTVLFERTR--------ELAVIRRCLDGARD-------G-RGE
LVTVSGPFGSGRSALLGELARRTSPS----------------------------------
----------EALVLRAEGARSESDVPFGVARRALHGL-----------------HPDAA
PPAGATE-------------------------------------------------ESEA
LRLRDVLLG-----LA--D-AMPVLL-----------------------LIDDLRWVDAD
SLRWLSLIGE-KLADAPVVI--VAV--------APHSADSAAHSPL---LKEFLAAAT--
ERV--ALRPLSPDGMSA-MA----------GEFLGEPESA----LIRACAEVSGGRPLFL
AALLQEL-----RRT------------RWPPRPDDVRALRPAA---------------IG
TQAVRALAELP-RAERE----IATALAVV------GPR-TDSGL----LFTMAELTAEDG
TAALGALKSVGLLDS-------DPVPRF--AHDAIGEAVA---HSLDTAAMPW-HARAAQ
TLHAA-GRPPEEVAGHVLAA--GD------PPGGWQIEVLREAARTALANK-NPDL----
-----AWKYLLRALLGSPQH-----SGGRA------------------------------
---------------ELLVDLAGAELASDPVSSLRR-LMQALPGLATPARRARELVRIPV
LACELPPSG--LTT----QLADAAAELGDPALLEGSARETALALDARLRVTHLRHVRWFT
E---------------------------------------------------------TV
RAFRLEGIPRDVRSAPARDRAAVLSYAGMLAG-------------------------KDS
GAVAALARHVVLAEP-------PAAEDLRTAVPLAVRAMLAADLFDQVDIWLASMAMA-T
LRANGGGKPDTLFADAERAFALARRGRHTDAALMAARTLERADAE-----FAPVTGRCCE
ALALVIAGGDPPAAAGDALARYRAQDNALLAPWLGHV-----VDGML-ALLAGDTAVALD
HILEAGREHELMGWTNP-A------VLPWRSWAAQMQYRLGRQDLAHDLIAREYEQAVVW
GAPSVVGRTLRVWA-DVTKGEKGIELALRAVDGLDVSTDRMAMVKAHLLLGVQLFAP-SH
ATTAEHLPRNE------------QLPQSTETD----------------------------
--------------------------------------------RAGDRPDSRRTAAVDA
ALTPSERRVALLVAAGKSNQNIATELRISLRAVEKHLTKVYRKLGVAGRTQLMEIVPPIG
RENEDGMAV-------------------
>AB086653.1|c1|1-367|-|BAD08354.1|putative_transcriptional_activator
------------------------------------------------------------
------------------MVFVERDE--------ELHALGGLLGDATR-------G-HGR
AVLISGAIASGKTALLEALSHHALDS----------------------------------
----------GALHLAATGAKAERELQLGVVDQLFRSV----------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------PLPADQAAH-------------------------------------------
------------------------------------------------------------
------------------------------------------------IAEIVTVD----
-------------------------------------ALL---PGESELESRTLRQPEAH
RIHQI-------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------
>NZ_ACEX01000523.1|c1|1-2257|-|ZP_05517735.1|LuxR_family_transcriptional_regulator
------------------------------------------------------------
--------------------------------------MRLLFGGARE---------GSR
VAVISGAVASGKTALLHQVTDAAGAR----------------------------------
----------DVRVLNAVASAFEQEFPYAVIEQLYQGM-----PARHQHARPRPGLDTPH
SPHGPHQ-----------------------------------------------ADLPLL
QAFHRALDE-----LT--A-DASLLI-----------------------AIDDVQYADLP
SLRALAYGIR-RCRSEALSV--VLT--------RGA-LTGPAGPAL----DELLHRPNA-
CHV--RLAPLTVAGVTT-LL----------TEELGPAEAER---HAAAFHDLTGGNLLLL
RGLLDDR--------------------FSRLTCGPLDTAPGTG--------TPAPGELFR
QAALSCVYRGG-PAHHR----IAQGIALL------GDG-SSARR----LSRLVAVEERQV
RQAVAALTEVGLL---------HDA-QF--RSADVRTVLL---DDLPADELARLHHRAAR
LLHEE-GADPIDVAGHLLHHELAE------PVEEWIPETLRDAARHAVAAD-RMEL----
-----AVNCLQMAHRCTTD------ERETL------------------------------
---------------ILQVTMVEAMWPFNPLSQLRR-LQSLAGPASNG--QLPTEYAIPV
L-LRLLTLG--QTA----EAAAALGRIGRDASPGSE-------LDTTLRTIDLALASTFP
GSPELRTF----------------------------------------------VERAEP
DGPRAGGPPAAEQTPECPQLIAGRALRTVLSH-------------------------GAD
DRAVEAAERVLETTR-----LTDPT---MPTVHAALQVLIYADRLATATSWCDQLIEQ-C
ERR-GAKGVLAAFR-ALRAQIALRAGRLPDAVRYAERALEELPARGWG--VA-VGVPLAM
LINAHTAMGHHDTAAELL-ARP--VPEEMFRSRYGLH--YLYARACH-QLATGRQHAALT
GFRACGEKMTAWGLDSP-A------MLPWRLGAAETWLTLGSQDRAARLAQEQLEL----
---------------TGEAP----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------
>NZ_CM000913.1|c15|6220002-6222797|+|ZP_06774752.1|AmphRI-like_transcriptional_regulator
------------------------------------------------------------
----------------MSRELFGRNK--------EFRIIEEMLDSALA-------G-EGA
SALMEGIIGTGKTTLLRWSEEQARQR----------------------------------
----------GMLVLSATAAPTERRFSMGIVHQLFSCL-------------ENAGVPSAP
PGQGAPH------------------------------------------PAPVDPQYLHL
SDLYKVISA-----TS--E-RIPILV-----------------------TIDCIQCVDRD
SLLWLGFLLR-RIENIRVVL--LAS--------RRR-GEPASDQHL---LVEFMESIRPD
RHL--HLEDLSPSTASR-LV-----------EALGSCVPGP----AETLIADSGGNPYLL
TQQILAT-----PSA---------------EQSGDGDRRDSAA------DLPIRLRA-VK
DRVLCLLRRLD-LDGLR----VAHAASVV------GGSAMNAEL----IGELCSLSVEDA
SRSLEQLAECGIL---------HPT-SLTFRHPIIARLLY---LDIPRSHRAVLHQQTAR
CLHNR-RFAPADITPHLVQA--AT------LDEPWMATLLLDAAEELLPGD-APT-----
-----ALQHIETVERHGVP------EQLAL------------------------------
---------------RIAELRVRTLLELDLPGSVPA-QYALLGLSSGH--RELAARAHRL
A-DTLIRLG--RPQ----EARQVLNGAQSVRDKG---------TAAAARLSRHLAHICMD
D-----------------------------------------------------GACAGA
PRGLERLESV------------------MLRR-------------------------IGN
GESASAARRLCRMCL-----ATPRTPYGSPSWYYALLGLIWAGDFDEAQSHIDTEVRL-A
VQE-GAATRIAEAR-SVRALLHMHRGLLTEAGHDARLALTALRRIGADAHHM-GALARSV
LIDVAVEKDQLAEASELLDVQV--PPAGQPAAWWHLH--LAHSAARA-LGRLGHTRQALA
LVTYCERELGRRGISNP-A------VLPWRSTKALICAGLGNLPDARRLAQQEADLALRW
GAPFAQGRALLALA-AVSPVGDVLRLTRRAVDLLDAEEAPLLYAQSLYATGHAYQQD-GS
TVRARELLHRANEVSIAL-GADGLVELVQKAL----------------------------
--------------------------------------------RDAGGRPDPRKVSAEA
LLTPSERQVAKLASQGMSNRDIARLLHVSLRNVESHLTHCYRKLRISGRGELSRFLPADD
GEAGPTLLHPHAAAGYHRHRQSA-----
>NZ_DS570652.1|c1|20880-23678|+|ZP_05006050.1|hypothetical_protein
------------------------------------------------------------
---------------MMSRELFGRNK--------EFRIIEEMLDSALA-------G-EGA
SALMEGIIGTGKTTLLRWSEEQARQR----------------------------------
----------GMLVLSATAAPTERRFSMGIVHQLFSCL-------------ENAGVPSAP
PGQGAPH------------------------------------------PAPVDPQYLHL
SDLYKVISA-----TS--E-RIPILV-----------------------TIDCIQCVDRD
SLLWLGFLLR-RIENIRVVL--LAS--------RRR-GEPASDQHL---LVEFMESIRPD
RHL--HLEDLSPSTASR-LV-----------EALGSCVPGP----AETLIADSGGNPYLL
TQQILAT-----PSA---------------EQSGDGDRRDSAA------DLPIRLRA-VK
DRVLCLLRRLD-LDGLR----VAHAASVV------GGSAMNAEL----IGELCSLSVEDA
SRSLEQLAECGIL---------HPT-SLTFRHPIIARLLY---LDIPRSHRAVLHQQTAR
CLHNR-RFAPADITPHLVQA--AT------LDEPWMATLLLDAAEELLPGD-APT-----
-----ALQHIETVERHGVP------EQLAL------------------------------
---------------RIAELRVRTLLELDLPGSVPA-QYALLGLSSGH--RELAARAHRL
A-DTLIRLG--RPQ----EARQVLNGAQSVRDKG---------TAAAARLSRHLAHICMD
D-----------------------------------------------------GACAGA
PRGLERLESV------------------MLRR-------------------------IGN
GESASAARRLCRMCL-----ATPRTPYGSPSWYYALLGLIWAGDFDEAQSHIDTEVRL-A
VQE-GAATRIAEAR-SVRALLHMHRGLLTEAGHDARLALTALRRIGADAHHM-GALARSV
LIDVAVEKDQLAEASELLDVQV--PPAGQPAAWWHLH--LAHSAARA-LGRLGHTRQALA
LVTYCERELGRRGISNP-A------VLPWRSTKALICAGLGNLPDARRLAQQEADLALRW
GAPFAQGRALLALA-AVSPVGDVLRLTRRAVDLLDAEEAPLLYAQSLYATGHAYQQD-GS
TVRARELLHRANEVSIAL-GADGLVELVQKAL----------------------------
--------------------------------------------RDAGGRPDPRKVSAEA
LLTPSERQVAKLASQGMSNRDIARLLHVSLRNVESHLTHCYRKLRISGRGELSRFLPADD
GEAGPTLLHPHAAAGYHRHRQSA-----
>AY310323.2|c1|4377-7205|-|AAQ82552.1|FscRII
------------------------------------------------------------
-------------------MLLERTT--------EIALVDAALGAATE-------G-RSS
LVLLTGPLGIGRSALLQRLSCLADDR----------------------------------
---------DDVRVLRAHAAPMEQDFAFGVVRQLFETL-LGDSPEDARDRWMDAHASFAR
HVLADDA-------------------------------------APPGADQAIAATEAVL
HGLLSLLAN-----VS--A-DSRLLI-----------------------LVDDLQWSDVP
SLRWLTYLAK-RLHGLRAVV--VCA-------------LRDGDPRSHHTLAREIREAGT-
QTL--RPASLSLTATHE-LV----------REHFGEAGDDE---FVQACHEASVGNPLFL
LSILVGT-----------------------GFLGRRPLAEHAE------TARRLRPSQLR
ERLASILRTQP-APVRD----LAAAIAIL------GEQ-SDAPT----LARLAGLDSIGY
AGALRALGALGALAAP------DEP-RF--IHRSVRDAAE---STLTMVQRERMHDEAAA
LLYAA-GSPAEQVAAQLMAV--VT------RRQPWAVDVLRAAADTALRRG-APDT----
-----AAGYLCRALLDSPAA-----GVGRG------------------------------
---------------RLLVELGTAERGFDPLACERH-IAQAMTLLPEP--RDRAVAALRI
S-PTALGPA--PLT-----AVDLLRQAAEDLGPADGLTGTDRDLALRLEARLRHCGHEDP
H-----------------------------------------------------ELAASA
HRLKELGPEPPVDTGGERELTIALLGAATLGCH------------------------LPA
SEVVRLAGRVLDREP-------ATSARIHSTLPLAIITMIAADSVEAVDSWLAVEHR--A
NER-GTTPANALVH-IEQALVHLGRGRLAQAREQSETALGMTEPAHQG--LD-TAATMTH
AIVALESR-DPSLAEKVLRRASRIRPQGL--TLTGIL--RLLEATR--EIAAGDQTGALD
SLHSCGRQLEAAGWHNP-V------LFPWRPWAVGVHRRLGDIRTARSLAEEEYARAEQW
GAPVGVGRALRLLG-RLEDGGRGIGLLREAVTVLRGSANQLELARALSTLAERL----GG
GAETEALAREAATLATSC-G---APGLAERA-----------------------------
--------------------------------------------ARGAGHRSGPPATPED
VLTPTERRVVGLACRGLTNQEIAGALGVSSRAVEKHLTHAYRRLGISGRRELIVLFSRAE
YAGTGD----------------------
>EU108007.1|c1|120734-123625|+|ABV83238.1|CppRV
------------------------------------------MACTSVGRRSYECRGPTL
GSRPSGGPRGAPRARRPTAGPSLMPRPVLLGRAGDLAEVDGALARAVG-------G-TAS
LLVFTGPIGIGRTALLEECARRGAAR----------------------------------
----------GMQVARAGGTDEEGGIPLGTARELL---------------AACGGPGPSP
PCGEPDG-------------------------------DD-------------------T
GALSAALAG-----RA--A-VGPVLL-----------------------LVDDAARCDAR
SLRWLARLCC-PRACLRVAV--VLTVLDGDAGHDGGTRHGGATGGL---PTELAAVADA-
VR---PLGPLSDEAISV-TA----------RAVLGRDATPE---LVAALSAATEGNPLHL
TCVLEELAARPQCTT-----------------EPPARRVAGAA------PAR------LR
DRFAHAVRRLP-ATERR----YLAAVAVA------GEK-ADDVM----LARLAELDATDL
AVAGAVTRSMGLTG-P------EGH-RL--RHGLVGAALG---VVQSSHQRRDLHLRAAR
MLRDA-GAPSDRIAAHLLTA--GG------AAPAWTVEALRDAAGTAVRRG-ESWT----
-----AVRYLRHALLAGPD------EPGRA------------------------------
---------------AVLLDLAGLERSRDTGLALRR-IVQAVPLLGS---LRERAAALCR
V-TPLALEG--AAP----PVIALLRGVAEELGRYGGT------GDTETRELALRVEARLH
YVDKHTRAGLS-------------------------------------------AAAARL
DELEALPDGLPIRTPGERELACVLLHSAAVGG-----------------H-------RPA
SVVAAACRAVLAREP-----ASSDH--VHSTVGMLVTCLCMADAVEDLPSWLSVALEQ-A
RAE-RAPVVEAVLH-AELAAVLVCSGRVEEAAEQVRSAVELVDELA----DD-SLLPGTV
LAPVLTAVPHGPGADRVLARYG-----ATPSVPPGFGACLQMLRARV-AAEAGDAETALE
YCLDAGRRFDQAGWTAT--------PVPWRPWAVEILAERGRRAEARALAEQELARARRW
GAPAQLGRALRMLG-QLGGTDRGAELLEQATIVLRTSGDRSEAERATRALTAHRAPP-GP
GDLPPRTGDPA--------G---PPPRLHDTV----------------------------
--------------------------------------------GTPVPGHRPTSR-ASA
ALTRSEERVATRASRGLTNHEIAADLAVSVRAVEKHLTGVYRKLGVPGRAALRQLRESGS
DRIA------------------------
>NZ_ADGX01000154.1|c1|6401-9259|+|ZP_06416727.1|transcriptional_regulator,_LuxR_family
------------------------------------------------------------
----------------MAAVLVERDG--------EIAALEECLQDLSH-------G-RGR
VMVIEAPPGMGKSALLRQAGDLARGR----------------------------------
----------EFRVLAARGSELEGDFTFGVVRQLLERV-PVENQGGGADLYRGAAATARV
VLDHGGG-------------------------------GD--------ATDAEPSHFLLL
NGLYWFLVN-----LS--E-RRPVVL-----------------------LVDDLQWIDNS
SKEFLDFLAH-RIEATAVTM--IVT--------SRT-RVPASGGAV----EGLVLAADT-
TLL--EPRGLSTDGVDE-LV----------RRHLGDKADPE---FRAACHDVTAGNPFFV
RELLRIL-----AAS----------------ETPPIAASVPAV------QAAGPTA--MR
RQVIGRLKRLP-PSATA----VAGAVVVL------GDD-TPLAV----VARQAGVSTDCA
AGVADQLTWAGIFE-RA-----DPP-AF--VHAVVADVVG---SLSPVTEHSAAHARAAA
VLVEA-GAPVARIASHLIRT--EP------ASKPERVDLLVAAAQDARRQG-SPAT----
-----AAVYLRRARLEPPP------AATCS------------------------------
---------------EISRLLGVCEIHALDLDAADEHLREAVSLATEPAQRAACACDLAA
V-RHVVGLTGETTD----LLVEALGLLESVPGASA--------LAAEVEAELIGLCR---
------------------------------------------------------FNFRSR
ALVVTHRASYLERPAADPAVLTANMALEAISD-------------------------GRA
DAAGDLAERALARDL-----PPERS-----ALGLSVLALIVTDRLDAAERHLQRAVAR-C
LQR-GLRSTLAMMR-GFLARVALLRGDLPGAGEHISSGLENLRPPNFA-----LPVLYAT
QINLLVEQGDLADAQAVV-DTE--ELGTLVKAPSLTRNWLFGARVRL-LIEQGRPDLALS
EALRWVELCRPYGCEHL-F------HTPWLLHAAIACARLGRHDQGKSLADEHLQLARHL
GVARHISVGLRIRA-LFEDADAASALLRESVELLEFSPARLEMARSLESLGHLLIET-GH
SRAGLEAIARGAELAAQC-H---AGRMVERLG----------------------------
---------------SLL--------------------------ADSGRKVPGAQVQGLH
ALTPAERTAAGLAADGFTNRQIAEQLFLSEKTVETHLSRAYRKVGVRSRTQLAAAMAAGD
TDLRRASSRIPAQPELVR----------
>AB164633.1|c1|2957-5818|+|BAD27468.1|putative_transcriptional_regulator,_similar_to
------------------------------------------------------------
--------------MLRHRESAGSNDFPLIERQHHIQNLDDAVRECRK-------S-NGG
LLLVEGRFGTGKTSLLRTVRALPSVE----------------------------------
----------GFSVLHARGNETESGFSYGLVRQLFEYL-LASATPEERTVLLAGPAAMAA
TLFEHAD-------------------------------GG------VRGGVAVDREHDLL
RGLYWMLVN-----LS--Q-RQPVLV-----------------------LVDDLHWADEP
SLRFLQYIEC-RLGQHPILC--VAV--------TAL-VHHGNAPE----AEHFITMPSM-
PAI--CLDDLSRDGVRD-LF----------SAVFNRDPDPD---VVRMLHEATGGNPFFL
SELLTEF-----RRQ-----------GEDTPGIGAAARTAPRT---------------LA
RALPRWVGLVP-PEYRENAHVLARSLAVL------CTS-GDFAQ----LASATGLHQDEV
TDAASALMDIGLL--A------QGT-PLRFRHSVMRNAVY---AHLPNTFRFRAHSSAAK
ALDRD-GAPAEHVAEHLLHA--PP------SEDRRAVDILVAAGEKALANG-NPSA----
-----AVAVLRRAMQEKAP------DDMLA------------------------------
---------------DLLLRLGEAEHRARDPKAVEH-LTQAMSLAKTP--AARASIAFSL
S-GALSMAM--RFG----DALDLLRSVHAEVEPHDRQ------LALRLRSELIKLASLSP
------------------------------------------------------NTKPAA
EQDLAAIIGADGTENSTSLIRAQQAQAALLNG-------------------------EPA
KKVADLSEEALPSGA-----LVAEPDGGAQASWIAAFCLLCCGRLTQALSILDEALQE-A
EAK-HLRLAAEDIR-ALRALVNMRRGALGEAEVDALSALKGLGAGSV---PA-LGRPLAV
LSLVGVLLHRNQLGAAVEAYERYGIPTHIPQFSIFLP--FMIARGQL-RIAQGEIESGMG
ELLRTHELLQEWGARCP-A------FSP-ATEAVHALCALGRREEAHALAEKQLEVARAF
GSDREVALALCARA-RATGGATHLEDLEQAVELFSGTADALDECAALIQYGTALRIA-GQ
PSAARRRLRAASDLADGM-G---ATALSKQAR----------------------------
---------------QEL--------------------------AVMGVRVRESARTGVS
GLTPREHRVCLLAAEGKRNQEIAHMLFVTVKTVEWHLSQVYRKLGVASRIELRDALGQN-
----------------------------
>EU108007.1|c1|109391-112231|+|ABV83232.1|CppRI
------------------------------------------------------------
----------MSDATDRGVRLVGRGS--------ESAWLASAGAGAAA-------G-SHV
VRLLVGPPGIGKSVLLDGFCTEVPA-----------------------------------
----------GVRAARAHGRERTSDISFAVVRELFGAL---AGAGPVDPALLEGGARWSA
PALDEAT-----------------------------------------GGAGPDNLYPVL
HGLYWLTVN-----HT--A-RGPLVL-----------------------VVDDLQWCDDA
SLAFLGFLLR-RSEGLPLGV--VLA--------SRT-DGAGALPDR---LAEIRTQAGA-
AVT--EVGPLDRSGVARLAV----------ARGAGTGAEPPQAPLLDALTEASGGNPLLV
EQLVAEL--------------------------GPVTGDGATD------RIHRLGREVVD
GLVERHVFDAP-PHVRA----VAAAVAVV------GAE--QTTV----LATLSGVPAGSV
ADAVATLVRTEVF---------APD-RSDFRHDLLRTAVL---RGLPGDELDDLRRRGAR
VLSDA-GRPAEVVAAVLLVL--PG------AGEPWMVDVLLEAAAAAAHRGARPA-----
-----VARYLEPVVAARPD------DV---------------------------------
---------------GARTRLAAALAQHEPERAVAQ-LRDALDRAVDLPSRAQAAVQLAM
T-SLAVQQAPRAVR----VLQDVLDTMDREFPADPGPEA----TELRTHVEAALLVVGLD
EK----------------------------------------------------KTVAAT
IDRMGRMARPAGRTPAERQKLAMMTVTLAMDG-------------------------DDA
AAAVDLARRVL---------LVDEATLGGWAVLASSLVLRLADEVEESTAVLDRLV---V
QSREQASAWTYSLAVGTRATNHVVVGSLAEGEADARTALDIAEQEAWR--GN-TVVPTIA
LANVRQQQGDPEAALELLDGIV--RPRLEDFAWEYHD--YLMARAGA-TADVGDVDRALS
TYRRCGDSLDAAGIANP-V------LAPWWVHAAVLLADTGRAHEAHGIVEGGAERAARW
GTGRGRGLALLARG-VVTAGPRGEDMLREAVEVLEGSPARTELILAHHLLGRAMLVS-DH
AEDAREQLRRAATLAARC-GALRAARVARELL----------------------------
--------------------------------------------VQAGGRMRPPTGSPLD
PLTGAERRVVALAAEGARNREIAEALFVTLRTVEVHLTSAFRKLGVTDRAALAGIVDAAR
VRSA------------------------
>NZ_DS999645.1|c2|126227-129139|-|ZP_06589178.1|FscRIV
------------------------------------------------------------
-------MPHRSRAVPPAPPLVGRAH--------QLDVLARHADAARA-------G-RPR
LVLLDGPAGIGKTALLRAALAEDGPL----------------------------------
---------AGMTTLYGSCRAVDVATGYSGVRALFGGL-GLTGRKGRTSPLLAGGARRAL
PALAADP---------------------------------------GELDADPGSTFSVL
QGLYWLAAN-----LM--A-DGPLVL-----------------------VLDDVHWCDER
SLRWLDFLLR-RADGLPLLV--VAA--------HRT-GTGLTAPDA---LADLVAHHLP-
ASL--GLGPLDTAEVAE-LT----------AHSFPEQDPLP--SFVGRLLSVTGGSPLEI
VRLLRDL-----------------------RSAGLGPDDTGTA------RLAQAGGKVVA
ASVRGVLEHQP-DWVRQ----VARAVAVL------GDE--DRTY----LAALGRVSVVHV
EEAVEILRDAGLI---------HPG-HLELSHDLVRAAVL---DAVGASGVAVLRRRAAR
LLSDV-GRSPEEIATQLLLV--PG------TPDVWAVSVLRDAAAQAEQRG-ACEA----
-----AARYLERVREAEPK------DP---------------------------------
---------------DVLSRLGKALAETDPARSVTL-LHEAHSLTTDV--RARAATAVQL
GLTCLAVQQ--SPD-GARALTEALDALDAELGPEPEP------ADRELRTLTESALLIVG
SDEK--------------------------------------------------ATLPDI
LRRTTGLTPQPGDTPAQRQQLAMLSVLSAAEG-------------------------GGA
EETVGRARRALRAPG---------VPLGVWSLLPTSLALSLADENEAAEEVLETVLRG-S
GDT--AAVWTYVLALSTRSLFRLENGAVSDAMADAQTALEILGQERWG--DT-ATMPHTA
YASVLTERGDPGRALEALDAIK--RPHLDRFVWEYHW--YLMARGRA-LAADGDLDGALE
VFGSCGASMAEAGLTNP-V------LAPWWLETACLLGEAGRGEEAGRAAAHGTRLAERW
GTRRALGYAALARG-AAARGTARTGALREAVALLADSPARSGHARGLLLLGRALVED-GA
VREGREHLREAVGLARRC-G---CVALARRAR----------------------------
---------------DEL--------------------------IAAGGRMREVTASPLD
MLTGTERTVAGLVASGAGNREVAESLFVTVRTVELHLTSVYRKLGVARRADLTEALREAG
ATARPAAERRPGHAKRRNP---------
>AY310323.2|c1|10298-13315|-|AAQ82554.1|FscRIV
--------------------------------MWLRWAGDRSRGAAPGRSGSAGPPSLAP
SDARESPVPHRSRAVPPAPPLVGRAH--------QLDVLARHADAARA-------G-RPR
LVLLDGPAGIGKTALLRAALAEDGPL----------------------------------
---------AGMTTLYGSCRAVDVATGYSGVRALFGGL-GLTGRKGRTSPLLVGGARRAL
PALAADP---------------------------------------GELDADPGSTFSVL
QGLYWLAAN-----LM--A-DGPLVL-----------------------VLDDVHWCDER
SLRWLDFLLR-RADGLPLLV--VAA--------HRT-GTGLTAPDA---LADLVAHHLP-
ASL--GLGPLDTAEVAE-LT----------AHSFPEQDPLP--SFVGRLLSVTGGSPLEI
VRLLRDL-----------------------RSAGLGPDDTGTA------RLAQAGGKVVA
ASVRGVLEHQP-DWVRQ----VARAVAVL------GDE--DRTY----LAALGRVSVVHV
EEAVEILRDAGLI---------HPG-HLELSHDLVRAAVL---DAVGASGVAVLRRRAAR
LLSDV-GRSPEEIATQLLLV--PG------TPDDWAVSVLRDAAAQAEQRG-ACEA----
-----AARYLERVREAEPK------DP---------------------------------
---------------DVLSRLGKALAETDPARSVTL-LHEAHSLTTDV--RARAATAVQL
GLTCLAVQQ--SPD-GARALTEALDALDAELGPEPEP------ADRELRTLTESALLIVG
SDEK--------------------------------------------------ATLPDI
LRRTEGLTPQPGDTPAQRQQLAMLSVLSAAEG-------------------------GGA
EETVGRARRALRAPG---------VPLGVWSLLPTSLALSLADENEAAEEVLETVLRG-S
GDT--AAVWTYVLALSTRSLFRLENGAVPDAMADAQTALEILGQERWG--DT-ATMPHTA
YASVLTERGDPGRALEALDAIK--RPHLDRFVWEYHW--YLMARGRA-LAADGDLDGALQ
VFGSCGASMAEAGLTNP-V------LAPWWLETACLLGEAGRGEEAGRAAAHGTRLAERW
GTRRALGYAALARG-AAARGTARTGALREAVALLADSPARSGHARGLLLLGRALVED-GA
VREGREHLREAVGLARRC-G---CVALARRAR----------------------------
---------------DEL--------------------------IAAGGRMREVTASPLD
MLTGTERTVAGLVASGAGNREVAESLFVTVRTVELHLTSVYRKLGVARRGDLTEALREAG
ATARPAAERRPGHAKRRNP---------
>EU108007.1|c1|123663-125717|+|ABV83239.1|CppRVI
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-------------------------------------------------MAAMLRHEP--
------------------------------------------------------------
------------------------------------------------------------
------------PGVVE----LARAVAVL------EPD-ADAGT----RARVAGLDDVAA
AHAAERLVELGVL---------DGH-RC--GHDPARTAVL---EAAGADRCRRLHARAAR
VLDSE-GAPLDRVADHHLAA--GP------PRDGGVVELLHVAAARAEQRG-DRVR----
-----ARRLLEHTLTGPVG------GRRRA------------------------------
---------------ALLVDLSVVERVAAPATARGH-LVEALSLLPCA--RERAELLART
VARSPGGAV--DLAPLLEDVLRDLADAGTGTSGQDRE------LRQRLEALVLHAACEDP
S-----------------------------------------------------GAARVW
EWVARTDPGELGAGAGADVLRSAHLLFSALALH------------------------TDA
ATAAARTAEAMPADL-------EDDAYLHPMQVAALGLLCWAEATTGLDGVRRRTLDA-A
HRT-HRTDVEAFLR-GVDAMLLLRRGQVPAALAAARASLDVLTGAT-------RLMVLRA
ATLALVELGRTAEAERLLAPVD--DRSSADRTWRWNY--LLDARAAV-LAATGRTREALA
LTLECGHRLMAVGIVNP-V------VLDWRRRAVELHHELGEHEAATAAAEEYVTLCRLW
GPEGYGGAALRVLG-LVQGGERGLATLHSARAELGASPLALDRARCTVDLGARMRAH-GA
AGEARALLRHGLELAVDC-G---APILAARAR----------------------------
--------------------------------------------TELAAAGGRPRRGGSS
SLTPAELGVARLAAGGATNRDIAAVLGTSQRAVEGHLTRVYRKLEIDGREGLASAPGLRV
GTCRPGGQGDVDAPTRAVAPRP------
>NC_008346.1|c1|1235366-1237837|-|YP_753761.1|ATP-dependent_transcriptional_regulator-like
------------------------------------------------------------
---------------------MGTGKSNSNELHYYSDRLKRKLEQIHL----------VP
VTIVEAPSGYGKTTAIRDFLQNSLSQ----------------------------------
----------GTPIYWFTAMDEKPSAAFRRLCREIEKI-DRYAGE-----RLVKIGLPNA
GTIGEAS-------------------------------EA--------------------
-------LR-----LV--QCKHETYL-----------------------VIDNFHFLQDA
LPPAFFLALL-EHGGQGLHV--IIV--------TQM-LKRDTLSIV---AGHGLLHITV-
SDM--RLNTRDICRYYA-LA----------NVKITLEDAQE-------VERYTEGWIIAV
YLQLSTF-----LET------------------GTFSDTPGIL------AL-------ME
HLVWDKLTEEQ-QNFLL----YLSPFEMV------SVQ-QSCSL----IGC-----DTLP
EYALEAFASPFIHY-D------PTE-RQYEVHSILTELFIQKRGERGPAFERQCLLQAGD
FCRDE-GQTARALGFYM-------------QIRDYERMLSLDLSEMNLEIINAVPF----
-----TELALDIA--QNCP------AEIKK------------------------------
---------------KYILNMLRIAWILFMAGMNEQ-FEILMDELHTMPELLDNSDLLRE
W-LLLSSYR--NFP----NLAEMTVIVRQAAPLFKSQ------YSQVILPTTLWCF----
---------------------------------------------------------GNY
SPLTEFYTKPGEADRQADVLEEYITIYSRLTN----------------GH-------GSG
ADALFRAELAYQRGN-----LNDAE-----ILAYKAAFLAESKQQSVVLLGAAILLAHVA
LHKADTVGWERAIA-SMEHAASFDRQDTFVIRSVI---------------DI-IRGVLLN
EFQNHMSIADWLQNADFE-DRR--LSPAVINIALFVHLVFLLHQGEF-ARVIGTAQAV--
--RPAEGLLSPYGDIFA-C------FL-----MATSHMALGNRVQAAAFVEDAARKALPD
G--------------LVSPFASYSQLLGDLVDEV---------------IARDYPALLEK
FKTVRKRFSQGWFTLREA--------LFSGEL----------------------------
---------------P-------------------------------------------P
DLTEREYEVAKLAATGLRNSEIAEKLVITESTVRSHMRTIFQKLQIDRRTRLAEKLK---
----------------------------
>NZ_ABYX01000211.1|c1|38174-40429|-|ZP_04711946.1|regulatory_protein,_LuxR
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------MMV--ILS--------QPDWLPQTAHMRL---SARFARQPHF-
HFV--QLQPMSKRAVGS-ML----------RESLNGAPGPD---LPAQLHALGGGNPLLT
TALVDDY------------------------LAGDRDGRPAVG------PA-------YA
RAVHAFLDRPD-IRLLE----TASAVAIL------GDY-GGTEM----VAKLTGIDPDAV
SGMMDALDLAGLL---------VKG-QV--QHPSTRAAIL---GSLAPGARSALHSKAAE
LKYRN-AATPNEVSSHLVAA--GE------TPAAWAIPVLRHAAGQAMLSD-DVQF----
-----ATQCLELALTGSKD------EDERR------------------------------
---------------AIRQSLVHNTWRVNPSAVSAY-GSSLREAAYAG--TLDGPGCFAL
M-RHALWHG--DRG-AFVRTRQVLSTLPTSVDPQ---------TEAELHLAYQWH-----
---------------------------------------------------------FGP
AAGTKEHADSGSHPGSALWDRTAAGLMQIWRG-------------------------GGN
ETTDASAERILQNCR-----LSDTS---LEALAMAITALARSGRSDRAERWCKRLIRE-A
DQR-SAVTWQAMLE-GLRASILLQRGEVAVAAERARACLDMLGEHNWG--VS-IAQPLTV
LLLADIARGSYDDAAKVL-RRP--VPDAMLETVGGLT--YLRACGHF-YLATKRPLAAVS
EFQKCQQLVRDWDATAA-S------LVPWRSDLAEANLHLGNTAMARDLARQQLDL-SAE
KDPYGSGLALRVLA-QASPPGERSALFARAAEFFQSLGDQLELDRTVRMANKAPRNA-AA
PRGSRPGDQR-WPAERRGAGE--SRKLSPGAS----------------------------
---------------PHSRSAP----------------------GGGRPSPSALRRGVRR
PRVPNSPRRPAPSSRRHTTPPSSARPSSASRSSRPSTTP-------TGRSAAGCSSPSVR
SSST------------------------
>NZ_DS999644.1|c8|6101824-6104718|-|ZP_06587674.1|regulatory_protein
------------------------------------------------------------
-----------MRPFDGRRRLLEPDS--------ASPFLWKSFEASAA-------G-AGR
LVFISGGVGSGKTTLQSELLHNAAGA----------------------------------
----------GALTLSATAAPDEQQINAAVLDQLLANS-PLPIDIPDSPGTVPPDSGDEN
DWSGVPG--------------------------------------------YRQTDTRIP
RRLCDALLG-----IA--R-TRPLVI-----------------------TIDDLHYADDL
SLKLILQLQL-RIRFTRMMV--ILS--------QPDWLPQTAHMRL---SARFARQPHF-
HFV--QLQPMSKRAVGS-ML----------RESLNGAPGPD---LPAQLHALGGGNPLLT
TALVDDY------------------------LAGDRDGRPAVG------PA-------YA
RAVHAFLDRPD-IRLLE----TASAVAIL------GDY-GGTEM----VAKLTGIDPDAV
SGMMDALDLAGLL---------VKG-QV--QHPSTRAAIL---GSLAPGARSALHSKAAE
LKYRN-AATPNEVSSHLVAA--GE------TPAAWAIPVLRHAAGQAMLSD-DVQF----
-----ATQCLELALTGSKD------EDERR------------------------------
---------------AIRQSLVHNTWRVNPSAVSAY-GSSLREAAYAG--TLDGPGCFAL
M-RHALWHG--DRG-AFVRTRQVLSTLPTSVDPQ---------TEAELHLAYQWH-----
---------------------------------------------------------FGP
AAGTKEHADSGSHPGSALWDRTAAGLMQIWRG-------------------------GGN
ETTDASAERILQNCR-----LSDTS---LEALAMAITALARSGRSDRAERWCKRLIRE-A
DQR-SAVTWQAMLE-GLRASILLQRGEVAVAAERARACLDMLGEHNWG--VS-IAQPLTV
LLLADIARGSYDDAAKVL-RRP--VPDAMLETVGGLT--YLRACGHF-YLATKRPLAAVS
EFQKCQQLVRDWDATAA-S------LVPWRSDLAEANLHLGNTAMARDLARQQLDL-SAE
KDPYGSGLALRVLA-QASPPGERSALFARAAEFFQSLGDQLELDRTVRMANKAPRNA-AA
PRGSRPGDQR-WPAERRGAGE--SRKLSPRGV----------------------------
---------------PAQPLGSGRGPAQPVGAPARSAPAARTE-QPTAPGSKQPEAHDAT
VLSEAEQRVAQLAALDHTNRQISSRLFITVSTVEQHLTRAYKKLGISGRSTLSKELWTRY
PQLMSSNGGPRSDSGVGVVA--------
>NZ_ABYB01000293.1|c1|112-2499|-|ZP_04696754.1|regulatory_protein,_LuxR
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------MMV--ILS--------QPDWLPQTAHMRL---SARFARQPHF-
HFV--QLQPMSKRAVGS-ML----------RESLNGAPGPD---LPAQLHALGGGNPLLT
TALVDDY------------------------LAGDRDGRPAVG------PA-------YA
RAVHAFLDRPD-IRLLE----TASAVAIL------GDY-GGTEM----VAKLTGIDPDAV
SGMMDALDLAGLL---------VKG-QV--QHPSTRAAIL---GSLAPGARSALHSKAAE
LKYRN-AATPNEVSSHLVAA--GE------TPAAWAIPVLRHAAGQAMLSD-DVQF----
-----ATQCLELALTGSKD------EDERR------------------------------
---------------AIRQSLVHNTWRVNPSAVSAY-GSSLREAAYAG--TLDGPGCFAL
M-RHALWHG--DRG-AFVRTRQVLSTLPTSVDPQ---------TEAELHLAYQWH-----
---------------------------------------------------------FGP
AAGTKEHADSGSHPGSALWDRTAAGLMQIWRG-------------------------GGN
ETTDASAERILQNCR-----LSDTS---LEALAMAITALARSGRSDRAERWCKRLIRE-A
DQR-SAVTWQAMLE-GLRASILLQRGEVAVAAERARACLDMLGEHNWG--VS-IAQPLTV
LLLADIARGSYDDAAKVL-RRP--VPDAMLETVGGLT--YLRACGHF-YLATKRPLAAVS
EFQKCQQLVRDWDATAA-S------LVPWRSDLAEANLHLGNTAMARDLARQQLDL-SAE
KDPYGSGLALRVLA-QASPPGERSALFARAAEFFQSLGDQLELDRTVRMANKAPRNA-AA
PRGSRPGDQR-WPAERRGAGE--SRKLSPRGV----------------------------
---------------PAQPLGSGRGPAQPVGAPARSAPAARTE-QPTAPGSKQPEAHDAT
VLSEAEQRVAQLAALDHTNRQISSRLFITVSTVEQHLTRAYKKLGISGRSTLSKELWTRY
PQLMSSNGGPRSDSGVGVVA--------
>NC_009953.1|c18|5153724-5156357|+|YP_001539318.1|LuxR_family_transcriptional_regulator
------------------------------------------------------------
--------MVFDLFDELPHPLLERDV--------ETQWIERKLRRLRG-------G-HGG
VLAIEGSAGTGRSSLLKLLYQRAAEA----------------------------------
----------GFCVLYARGNEFEGDVPFGAVAQLLEPV-------------LPARMVEES
PSVASPA---------------------------------------------------LL
GRLRSDLLE-----CA--G-DRRLVL-----------------------VVDDARWVDVP
SLRFLSYLGA-RAERTPVLL--AVA--------LDP-ADRGSAADW---LGSVSTSLET-
TLL--RLAPLSEVATRR-LV----------SVMLGTASSPE---FAAACFDATGGNPLLL
HEVLAEA-----------------------AAGRSGSPEEALS------GLSRRPPVRVM
RQMVRRLQSLP-RSSVA----VARAVAVL------GVA-EDPVV----VSRTADCPEAEV
DDAVTVLVDAEVM---------TDGPALRFAQPMLRTAVY---AGIPAFLRGRLHARAAR
ALAET-GAPSEAVAEQLVNV----------------PPAMVPAAGAKELAE---------
-------------------------PRSRN------------------------------
---------------RRASRHLRPVWGENPVERAAAALEAARTLTLDC------------
-----------QFD----RAIAILEAAIADVRDPA--------LSPRLEATAVWIAQLSP
S-----------------------------------------------------------
---TRGRGRARLDTLERPHLAEKALLDQIWRG-------------------------TPA
EHIGRLTGDLLHRPR-----IPAGDSTGWSAGLVAAVTLAHFDRLAETRQAVLTLRDA-A
S---QTHTTLAGLDLCLRAAVDYQLGDIAGAGDLALQVLSGTDGQRPA--RMVQAFAGAV
RAETLIAQGALDAAAAMV-EEPGLIDDCGSDTIAVLP--LLRARGHL-RIAQDRLEEGLT
DLLRGRRAAASLGLTPG-A------WVGW-SSAVTALHRLGRTEEALFMAREELAGARSC
GAPAPLAAALRTLG-LLTPGPAALPLVEEAAGLMEDFPGQLEKARTQLTYGIMLHRV-GK
RAAAREQLRMAAGTSGVH-G---AHVLNRRAID---------------------------
--------------------------------------------ELRSIEGDTTDRRSRT
VLTPQQQRVAELAAEGMQNEEIAQKLFVTVKTVEWHLTQAYRKLGIESRTALSPALAATT
LDYAKSA---------------------
>AB097904.1|c1|1645-4449|+|BAD38871.1|putative_activator
------------------------------------------------------------
------------------MRLVERDQ--------ELSSLTDVIRSSAR-------G-AGQ
VALVTGGIGCGKTALLAEIGSVAKKL----------------------------------
----------GFEVRGATGSLVERPIPGAVLGQLLRDVEPALVDRAMAAGTARGADPGRH
DGTGTVA--------------------------------------RLGPDTLDAETGRAL
QDLCAAVER-----RA--R-RAPLLL-----------------------CLDDVQFLDDL
SLHWVLLLIR-RLSDVPVTL--IMT--------ERG-LSRPADPRL---RAELRRRPEH-
RPL--ALRRLTGDGVAA-VL----------VPYLGADLASR---LAAECHGVSGGNPLLI
RALAEDS-----RRG----------------AAGTVHATGRLV-----------VGDAFL
DAVTGCLHRGW-PALLH----IAQALAVL------HEDHATAQT----VARLAGVEDAVL
SRGLRALDDAGLI---------SDG-RL--RHPAAAAAAL---AGCTGEERARLHRRAAE
LLYEEGGAGVLGVARHLVAA--GT------TTAPWAVDQLREAAERHLALS-RPAE----
-----ARLCLEVALRHCRD------DDEQL------------------------------
---------------RLKALLAGATWVLDPTMGARH-LVELADALRAG--RLPDQYAVVL
A-KYLLWHG--RYV----EAADAVERIGRRDAGMTDPL-----AAAEARATRELLSVGYP
G--------------------------------------------------------LVS
AGATGTGPARQVSFGGDPRIRGAVALSDVLRR-------------------------GPR
QDVVDSAEAAMRAMR-----LGRNT---HEWLTCAVSALLFADRTEAAAAWCDHWLDE-A
RGR-RVPLWIAEFS-SLRAGIALRQGRPREARELAEAALARIPVESWG--VC-IGGPLAN
LIQANTDLGDHEAAAEYL-EVP--LPQGMFDSRFGLY--YLHARGQH-YLATGQPRAALD
DFTNCGALMRAWGLDQP-S------LVPWRSGAARALLALGENERAHALARQQLDL-AGD
ALTRTRGISLRVLA-AAGRPSQRGALLKSATAILERSGDRLQLAGALAELAVAHLRS-GR
DTEAQALAQRAAHLAGAC-GAPALAAEFARLL----------------------------
---------------PTR--------------------------MAPPGTPGRAPAQDLD
LLSPAEQRVASLAGEGLSNKQISARLSITVSTVEQHLTRIFRKLGVRTRGELRQNRALAG
----------------------------
>AY373435.1|c1|2168-4990|+|AAS46340.1|NlmRI
------------------------------------------------------------
---------MKLSEPSYYPEIVERSE--------EISLLAQDLANTKR-------G-EGA
VVVIHSGPGVGRTALLDEFLRQSGNS----------------------------------
----------GARVCAATGSAAETGNELGVVTQLFPED-----GPIAAAVWLARALDDHH
GDPSPDA-----------------------------------------------------
DRLFDMLRG-----EF--R-QGPLVL-----------------------AVDDVQLADAA
SLRFLLHLIR-RLRTTPVLI--VLT--------EPV-GSCALPLAF---QAELLRHPRC-
RRL--RLQPLSVDGVTR-MI----------EPYVAETEVAR---LATQFHAVSGGNPVLV
RGLLADH-----RAG----------------QRLEEQGIGAQY------NGYPA----FT
QAALVSAYRDD-PVLFE----VVCGIAVL------GEN-ASPAL----VACLVDRGADVV
ARVMTALNTASLL---------NGP-AF--RSPLVAKALL---ELLDVETRGELHRRAAE
LLHAD-AALPADVAHHLLAT---P------IAESWVLPTLLAAAEQAVQGG-GQDF----
-----RLDCLRLAGRQAAT------EEERA------------------------------
---------------AVVAARVRIGWEIDPRLITPW-LGELGAALRRG--HVGSSDAAWT
V-KHFVWHD--HVE----EAADILSALMERTEENSD-------AHAELEIVRHWVRYTCP
TL----------------------------------------------------LEGSVD
ADAPSLSGPFPQRFQLRPASYAVEMLGRLFTE-------------------------GPC
DQAAAMAEEILRGCR-----FGETT---VEAVEGALLVLVYAERPGRALHWCEALLEQ-A
GDH-PTGTAAAILS-SIRAEIALRQGALEEAETYADRALNAISRLGWG--VA-IGSPLAV
RVRAAMAAGRTGLAGAWL-NQD--VPQGMFRTRHGLL--YMHARGHY-HLATDRPTVALE
DFLTCGRLAKEWGMDVP-T------FLPWRTSAALAHLALGNGSRASALAREQLTR-PGG
GWPRCRAVSLRVLA-ATSELDRRPALLRESVNLLESCGDHVELLHSLADQFQALSEA-GA
PAKARIAARHARTVADNC-G---TETLFRRLF----------------------------
---------------KEEVPE-----------------------DTDESADFGQDHQGFA
SLTDAERRVTALAALGYSNREIGRKLFITKSTVEQHLTRVYRKLGVRNRADLGDLLAGIN
LAAQPQVMGRTSSAAVG-----------
>NC_003155.4|c16|3627319-3630147|-|NP_824077.1|LuxR_family_transcriptional_regulator
------------------------------------------------------------
-----------------------------------------MLASAGQ-------G-EGG
VVLVNAGPGVGRTALLDAFLRKATES----------------------------------
----------GARVCAAAGSSAETEAEFGVVGQLFPPT---GPLGAGFRLARAIGSRDAG
PGLDADR---------------------------------------------------LF
DALCQELR------------RRPTVI-----------------------AVDDAQLADAA
SLRFLRYLVR-RLRTAPVMM--VLT--------EPT-GPDALPPSF---QAELLRHPQC-
RRL--GLLPLSRDGVTQ-VV----------SAQVGSDRVPR---LAADFHAISGGNPLLV
HALLADH-----RAAHRLSPVPSVPTVPSVSSASSAASASSAASAASAVSAAPAASAAFA
KAALAWAYRDE-PVLFD----VACGFAVL------GES-ATPAR----VACLVDRGADAV
DQVMTALDTAGLL---------AGG-TF--RSALVGKALL---EHVDVETRAELRRRAAR
LLHGD-GAPATVVARHLLAA---P------VAEPWAGRTLLAAAEKAMQEG-REEL----
-----SLDCLRLAGQSATT------EQERA------------------------------
---------------AVVMARVKIGWEIDPRLVSPW-LDELVAALRRG--DLRSGDAAWI
V-KHLAWQD--RFP----EAVESLSTLAAAGDAGEPG------VEAELHFVRHWLRHSCP
P-----------------------------------------------------LEASVP
GPSNPTRPRTPRLRRVSPASYAGEVLGKVLTE-------------------------GPD
DHTVAMAEEILRGCR-----YSETV---VEALEAALLALVYAGRPDRAAFWCDGLLQQ-A
GTR-STGTSVAILS-GIRAEIALRQGALPAVEQYARSALSAISLPGWG--VA-VGSPLAA
LVHSTTASGMSGVAGAWL-NQA--VPDGMFRTRHGLL--YTHARGHY-HLAVDRPAAALD
DFLTCGGLAKEWGMDVP-T------FLPWRTSAAQAQLALGNPGQARALVREQLGR-PGG
STARARGVALRLLA-ATGEPGRRPALLRESVNLLESCGDQVELLRALADRCQALDHV-GA
PAKARMTARHARNVADAC-G---GDALFRKLF----------------------------
---------------RDEVPD-----------------------REGDPDGLTGEEQGSA
SLTAAERRVTALAALGHSNREIGRKLFITKSTVEQHLTRVYRKLGVRNRADLGDLLAGTN
LGAGTPAMAMASSAVAG-----------
>NZ_ACEX01000063.1|c1|17297-20098|-|ZP_05512328.1|LuxR_family_transcriptional_regulator
------------------------------------------------------------
-------------------MLLEREP--------ELTVLRKAVLEVES-------G-GGA
LLLIDGEAGAGTTALLRELVRLGEDA----------------------------------
----------GAHVLRCGGAQSERQFPLGVVRQLVLPL-LAARDHLVPDASRAMLGVVSG
AVGRNPG-------------------------------DE----------LGTDTLASVL
HGLHTALTG-----LS--A-GRTVVV-----------------------AVDDLHWVDEA
SLRALAFLAA-RLDGTRVLIGVVLQ--------DGG-SSRDP-------LVREIADAAT-
YRL--RAEALSEQAAAR-LM----------ADRFGAGYDSE---FAAACHDLTSGSPKEL
RVLLDRA-----QAQ---------------RLRGRAVEVERVR------ELGRS----FR
RERLLRLLRRD-RVVHT----FAKALVVL------ADQ-ATEDL----VVRLSGLSRDEC
AAARSVLWKARLL--S------GSG-RLAVHDPVLTRVVM---ESLGAEESSRLHRAAAA
LLDEY-GAGPEEIAVQLLHV--DT------VRDAWEVDQLRAAAVAARRRG-APDA----
-----AARYLRRALLDLPM--A---GRERA------------------------------
---------------DLLVELAAVEWDTDPASAVRH-IEQAARLMPDH--RRRAEVVSRT
P-LHMVGCDRRLAD----LVREVSARFGDPGALSGYDRE----LALRLEARSRYAAIQDP
E-----------------------------------------------------ALASAG
DRLVELGGDAALGSGAERELCVVLMRAATLNG-----------------Q-------VGA
RPIVRMARQVLDHEP-----THSAP--MSAALQILPWMLLVADAGDVASSWLDAALAH-A
QRQ-TKPALAALIE-AQRGLVLLGRGDIVVARECALRGLELADRDKPE---T-MLVPAIA
VGTLALELQDDTLAERVL---E--IAGSDTDLRMFMM--RRCLRGRL-AAARGDLPAALA
QFIDCGRVLDRAGWVGS-A------VSMWQVSAALLHHRLGRRQEAIELAEENHRRALAW
GAPTAIGRALHTRG-AVIDGPKGIELLRQAVDVLHDAGSPLELSRTLVTLGKRLQS--AA
PAEGDQLLVRGRRLAEQS-Q---TFSVGEHAG----------------------------
--------------------------------------------GLVRGVTPASAPVARS
VLTRGEATVAELAARGRSNQEIAAELEISRRAVEKHLTNSYRKLGIEGRSALVSALGVHG
HGE-------------------------
>NC_009142.1|c9|3165575-3168268|-|YP_001105093.1|LuxR_family_transcriptional_regulator
------------------------------------------------------------
--------------------MSGRTI--------ALAGVVSCLDRVAA-------G-SPA
AVVLEGAFGSGKTRALDLASEHAHRA----------------------------------
----------GLTAVRLPTPSSFRAGACSAVRDLWA---------------FGPFAGRDD
EPFAPEA-----------------------------------------------------
--VARAVLA-----------ARRTVL-----------------------LVDDLHRLDEE
SLRWLGSVLD-RLPDSSLGV--VAT--------APR-GEGERAGGP---PAEVVARFSD-
RR---ALSYMDLAEVTE-LA----------EAQLGGPPPRG---FAEECLHQTGGNPLLL
NWLFGEL-----RAR-----------------AGNASGGRLAR--------IEEIGLREL
AEILANRYGSRCSVATE----VIEAVALL------APE-ASTEL----VAGYCGLAPSTL
AEVTDRLEATGVLE--------RSGAGHAPAAPVIHRAVL---AGMSPDRLEAAHVRAAA
LLHGE-GAPAELVASHLLQV--RRA-----EMPAWFCDVMHEHARGLVARG-EPEQ----
-----ARRYLLRAVDRCT-------GSHRA------------------------------
---------------EIFRELATIALRSDPPTARRY-LHEALRLQADP--GIRVRLRIML
A-NAMVMAG--ESESAVRTLRAGLDEIGGTDPRGASR------LRQELRLTCLW------
---------------------------------------------------------GDL
GEVAGPEANPGPEESGHRSKLVANALRCYWAG-------------------------EDR
EQAAADAEEALETGP------DDEH---PASLLLPALVLARSGAFAAASTHVHRMLLE-A
TAV-DASAIVVHAG-SVLAEILLHAGDLPACAQMADSAVEATSRRSAGEHPMYLGTAVAS
AVAVALATGDHSGAWRCLDGTG--LSAEVPRWSPYNS--VLLQRGRL-HAAQGELDAALA
DLRECGRRMTAANVHNP-A------AGAWRSESALVHARMGHHDRAMSLVRVELEQARRW
GAPAPIGQALRVMG-LVSRDEARLAHLTEAVAVLRDSGARLSYAQALFDLGVTYRKL-HR
PNEARPRLRAALAHARHC-G---AQVLVHRAS----------------------------
---------------EQL--------------------------AACRVRPQRTTALGVE
ALTPAERRVAVLAAEGRTNRQIAADLYVTRRTVELHLSRVYQKLLIPGRPALGRAMSSS-
----------------------------
>NZ_ACEX01000063.1|c1|22983-25817|-|ZP_05512330.1|LAL_subfamily_transcriptional_regulator
------------------------------------------------------------
------MVARSGPQSEPATELAGRDW--------ERSLLVERARGASL-------G-AGQ
AVLLRGPAGIGKTKLLSVALDELTPV----------------------------------
----------ARTVLTVKC-PESGSAAYETVRGLFEPL-RLTEDGAESSPLLSGSARLAL
PALLPDR----------------------------------------TDETGPTDTYSVM
HGLHWLTAG-----LS--A-DGLVVL-----------------------AIDDVQWCDEA
SLRWLGFLLR-RAEDLPLLV--LMT--------QRT-GHERSRPEV---LDEISDPLSC-
LVV--DLPPLTTEAVGE-ML----------HRAFDRELDAA---FSAKCAEITGGNPFLV
QRVVSRL-----RGD------------ELSPGAEQTALLDELG---------------WD
VVARSLLDRLP-RDAYA----VATAIAVL------GGE--TIET----IAALAGTQPGPA
GAAVEILRANDLL---------LGD-GLDYAHDLIRSAVL---DTTSADERVALRERAAR
LLNDS-GRPAEEVAVQLMLL--PG------DPAPWMVGVLLTAAESAEHRG-APAA----
-----AAHYLSQALKHDPD------DV---------------------------------
---------------TLLAALARVLGQTEPTRALEY-LEHALGLVHDPRTRAPLVVQYAL
T-SLEVQNSLRAFE----LVDEVIDAIDAEDGAENTP------ADRALRTLVEFAYLISG
LDEK--------------------------------------------------STVRRV
GRRFRDYVPPQGDTAEERQLLGMLSSLGTFQG-------------------------RPA
TEVAAQAEKVLRIGD-----VAPGG----WAVLGASLSLYLADQIDPALDALTALIEH--
AQR-TGEAWTHTLGRSTRAEVYHWAGNVSEALSDAQLSFDVVLQESWA--PN-VVMPQTA
LASALIRRGEPARALEVLDLIT--RPRLDRFTLEYHW--YVMARARG-RAALGDLEGALT
YFYRCADSLAEGDISNP-V------LAPWWFDAADVLAELGRPHEGLDLIERVEESVHRW
GTTRALGMLRMARG-VLTAGDAGIDLLTDAVHTLADSPGRWEQARAEYLLGRRLYRR-GD
GEGARERLRRSIDLAVLC-G---DQLQLNQSL----------------------------
---------------PAL--------------------------SEAGGRLRRSTASPAD
TLSGSERRVAQQAIAGATNREIAESLFLTQRTVEFHLTSVYRKLGIRGRQDLARVLRKT-
----------------------------
>X86780.1|c1|98467-101085|-|CAA60471.1|regulator_of_cholesterol_oxidase
------------------------------------------------------------
--------------------MTGRAN-----------------------------G-RGV
VVTITGPIACGKTELLDAAAAKA-------------------------------------
----------DAITLRAVCSAEEQALPYALIGQLIDNP--------ALASHALEPACPTL
PGEHLSP----------------------------------------------EAENRLR
SDLTRTLLA-----LA--A-ERPVLI-----------------------GIDESH----A
NALCLLHLAR-RVGSARIAM--VLT--------ELR-RLTPAHSQF---QAELLSLGHH-
REI--ALRPLSPKHTAE-LV----------RAGLGPDVDED---VLTGLYRATGGNLNLT
RGLINDV-----REA---------------WETGGTGISAGRA---------------YR
LAYLGSLYRCG-PVPLR----VARVAAVL------GQS-ANTTL----VRWISGLNADAV
GEATEILTEGGLL---------HDL-RF--PHPAARSVVL---NDMSAQERRRLHRSALE
VLDDV---PVEVVAHHQVGA--GL------LHGPKAAEIFAKAGQELHVRG-ELDT----
-----ASDYLQLAHQASDD------AVT--------------------------------
---------------GMRAEAVAIERRRNPLASSRH-LDELTVVARAG--LLFPEHTALM
I-RWLGVGG--RSG----EAAGLLASQRPRAVTDQ--------DRAHMRAAEVSLALVSP
GT----------------------------------------------------SGPDRR
PRPLTPDELANLPKAARLCAIADNAVMSALR--------------------------GRP
ELAAAEAENVLQHAD---------SAAAGTTALAALTALLYAENTDTAQLWADKLVSETG
ASNEEEAGYA-----GPRAEAALRRGDLAAAVEAGSTVLDHRRLSTLG--IT-AALPLSS
AVAAAIRLGETERAEKWL-AQP--LPQAIQDGLFGLH--LLSARGQY-SLATGQHESAYT
AFRTCGERMRNWGVDVP-G------LSLWRVDAAEALLHGRDRDEGRRLVDEQLTR---A
MGPRSRALTLRVQA-AYSPPAKRVDLLDEAADLLLSCNDQYERARVLADLSETFSAL-RH
HSRARGLLRQARHLAAQR-G---AIPLLRRLG----------------------------
---------------AKP--------------------------GGPGWLEESGLPQRIK
SLTDAERRVASLAAGGQTNRVIADQLFVTASTVEQHLTDV----STGSRPPAPAAELV--
----------------------------
>AY354515.1|c1|66398-69217|-|AAQ84162.1|PlmR1
------------------------------------------------------------
----------------------------------MSDILELVLSNHAAPEFKNWHK-NGG
LLFLRGPKCVGKTTTLNRICASEADS----------------------------------
----------GTLSLWATGWLNEYGSPFGVLQQILDQL-DAAEEGGDQPNGAGPSSSVAD
GPRTPSD-------------------------------LT-------------------F
EWVYARLLK-----IA--A-RRPLLI-----------------------VVDDINYVDGP
SQLFLRFVAR-RLKGTPIRL--AMA--------ERT-GCALSFCDDL--RTDILRLPYT-
SLV--RMRLLGRKQIARSLTEHLPQF----RGPFPCSAVNR---MADDLHDLTGGNLLLV
DVLLRTW-----LTS-----------------ADPMPKELTVD------TA-------FH
DCVRGMISDTDMPGMLS----GAHAVAVL------GDF-ASLPR----LARLLGIGITRA
SRIFGALNDLGML---------AGD-CL--R-PDMRRALL---QDASFTARGELHLRAAH
VLFED-SAPLTQVVEHLTAV--GM------IGAPWDLPLVLGLVNQALKSG-STDV----
-----AGRLLKLAKGSAVG------PEERS------------------------------
---------------AVEMMLLRTTWLTDPGLVASL-LPTLGRAAFRG--VLNATDLAFL
V-RAALWHG--LTE----LAAELMPLMREKAPRSPYP------AEVGLAEALYSLWSGMP
MD----------------------------------------------------WATLEL
SSSSEADERYGPGADVHSLLTGLRKIHAPANE-------------------------GDR
AQAIFWAEQILQGIR-----VQSSA---VETLLFAYTVLESLGSLRAARPWFTQLSEA-L
EAH-PSPLWEALVS-VVQAKISLELGDLGSAYRWIQKALARKPWHEWG--AP-IASIAAL
LVQTLTEMGRPQEAAEVL-DRP--IPPAAYQGCGGLK--YVYARGRY-HLATDRLHAALA
DFESCRDMSASLWIETPARVNQAHLMVPWRCGMAEAYLALGDVAGARDALRQQLQQ-LPK
EETSVHGTTLRLLAKTTEDDARRLSLLKNSADTLERDGSRLQLAYTLTELAAAYRES-SR
LNLARTTSKRARRMAEQC-E---AGRLLALVT----------------------------
---------------ADAH-------------------------GPGRDTQPVCRHPELA
ELSSAERRVAVLAILGHTNREISGKLFITASTVEQHLTRIYRKLRVQHREDLLDKFSTVF
MALEQSG---------------------
>AB193609.1|c1|2518-5250|+|BAE93719.1|putative_transcriptional_regulator,_LuxR_family
------------------------------------------------------------
------------------MAFVIRAA--------EFEALRSAFSRCLH-------G-MSR
TILIEGGVGCGKSALLHAITEHAADM----------------------------------
----------GATVLSVQGRSTAAHPPISLFQQLVAQV------------------PAPP
PGEGPAG-------------------------------------------------ATAA
LQFSAALPH-----VA--E-NGAVVI-----------------------SVDDVQDIPWS
ELDFLLQTVS-WHRSRRTLI--LLS--------HCP-HLRHRDQPV---KTELLRRPNA-
QRI--HLGPLDERGVRA-AV----------TTRVNRPHEQ----WIELLHHLSGGSPLLL
RALLEDL-----RDE-----------DMEVRPTGAETTSGPLG--------------MYG
RAVVSCLYRSG-ASAVE----LGRLISVL------GDS-ATPEL----LSGMTRISPAVM
DQQLEALRDSGVL---------DGT-NF--RHGSAPREIL---ADLGTLQRNELHRRAAV
VQNNA-GSPTTEVARHLLAA--RH------AAEAWQRSALRDAAETAIGQE-KIRL----
-----AVRYLELALENSPN------TPDRI------------------------------
---------------EIYLRLALITQRISPAATEIRHLTALLSAFHSD--KMPSTAYDGL
A-DLLFSYG--KIQ----EAFAVLRRQGAESSAADVR------AGDHPSIAWLWAWYSHH
T---------------------------------------------------------DQ
PQNDGQAPRLPPPDGGGAGPYGATALFQTFEGSFLF---------------------GER
GDWAAAAENLLEVST-----LSDST---VWSMACAIKALVIADRLETAWQWCEWLVKE-S
ATR-DAPGWQAVFS-LQQATVALRQGKLAAGLDCIRLVETVITERSSG---Y-ACAVETV
LAATHMEMGRYDEVARVF-AKP--IPPAWEKSIYWLS--YLCARGSF-HLATNRPHSALA
DFLRIGKVAERTLVDHP-T------LVPWRLYVAEAWLHLGDEKMAARMLDEHTAR-DPG
HGGRNHAMVLRLRA-RLAPPHRRVGLLFRAMDELLASGDRLEQARTLHELGAALRGL-GH
DSWAARARAAAAHIARNCLP---DQAVARSPA----------------------------
---------------PERVGRPG---------------------PAAVSAVGTPCPVGQK
LLTRAEHRVAALVAKGLTNRQVAGRLHITVSTVEQHLTRIYQKLGIGQRADIGQRLKSLP
A---------------------------
>NZ_ABYA01000069.1|c1|1-1117|-|ZP_04684271.1|regulatory_protein,_LuxR
------------------------------------------------------------
------------------------------------------------------------
MALVTGTVGSGKTQLLEAFGAWVVGA----------------------------------
----------GGRVLRAAGSTAENGLPLGVIGQLFHSA-LLEPTATARIDDLLRSAFDGI
AKTSGRP-------------------------------EV--------PPAGSPFWVKAL
HGVYTSLVD-----LA--D-EGPLVV-----------------------AVDDVHHTDVA
SWQCLLYVIR-RLRRARIMI--VLA--------EAS-TLRPANPLF---RAELLSQPCL-
SRF--TLPPLTADAIAC-LV----------DRDAGGETETVTREAADRFHSITGGNPLLA
RALIDE------RAG----------------GRGPVAGDT------------------FD
QAVLRCLYRHE-PGVRR----AAQALAVL------NRG-ASAEL----LGQLLDVPPGST
VPAMRVLCGVGLT---------ESG-RL--RHPRILHSIL---SDMSVEERRWLHQRAAE
VLHEH-GAEAGEVARHLVAA--AW------TEAPWVVPVLQEAADNALFAG-RPDM----
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------A-----------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------------
>AM238664.1|c3|628902-631778|+|CAJ88194.1|putative_regulatory_protein
------------------------------------------------------------
-------------------MLVHRDE--------QLAHLRWAFHACEK------HG-HGQ
VALVTGAVGSGKTQVLETFGEWAATA----------------------------------
----------GGQVLSAAGSRAEQGLHFGVLGQLLHSA-RLKPEGIREVEELIREVALAV
PTAEARS-------------------------------GA-APETLAEALTADGLWAPLL
RTAFDTFLT-----LA--G-RGPLVL-----------------------AVDDLQHTDAA
SLHCLLYVTR-RLRNARIMV--LLS--------EAT-TLRPAHPLF---HAELRSLPRF-
TRV--TLPLLTADSVSR-LLGEEAGTPDVRGDGAGAPDVRE---EAGRILRVTGGNPLLS
QALVDERAHRGTDSA---------------PDTGARAGDT------------------FE
RAVLDCLYRHE-PGVRL----VAQALAAL------DRP-ASPEL----LGQLLDVLPDST
VPAVRVLEGAGLV---------HAG-RL--RHPRIVLAVR---SDMPAEERRRLHQRAAE
VLHEN-GAEASVVAEHLVAS--AW------TDGAWVVPVLRDAAAHALSTG-RPDH----
-----AAACLRLGGRAETD------KDRRN------------------------------
---------------SLMAMLITARWQVNPLAVTGQ-VSQLVEAARAD--ESSPSTAVSA
V-PYLLWQG--RAE----EAAEAISGCGAGDH---GP------ASNELRLTRLLIALSHP
D-----------------------------------------------------YLGTVR
EDPSSWTRAATAPDSASPLLQAVSVLGNALMP-------------------------TGG
VDTVAAAEQLLERHH-----TDSGS---LGLLTAPLLALLCAGPADRVAVWGERLLAR-Q
GVQ-HTPAWRGVIR-AIHAEATLRLGDMDAAERGARLALEDLPAPAWG--VA-VGGPLGT
LITCTTESGRLFEAERWL-SQP--VPAGVFRTPVGAH--YLIARGRH-HLAMGQHQAAAA
DLHRSGELVRSWGIDVA-G------LVPWRLELARVQLSLGHRTHAAQLLQEQLQV-SRG
LDDRTRGRALRLLA-STATPVLRRKLLSKAVTVLQACSDQQELARALSDTSQTLPQT-GD
APRARLFVRRAGRLAQAS-G---RAPALPQQV----------------------------
---------------QRRSAPSDAAPTGGS--------------SSDASSDGFESRDQDG
LLSEAERRVAVLAARGRTNRQISNELYITVSTVEQHLTRVYRKLDVKSRTDLPNRLMALA
EPMA------------------------
>NZ_DS999641.1|c4|819585-820478|-|ZP_06575048.1|regulatory_protein
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------------MA-VGGPLGT
LVGCATEAGRFADADRWL-AYP--VPAGTFHTPIGAH--YLAARGRH-HHAAGRAASAIA
DLRRCGKLLRSWDMDVA-G------LAPWRLELARVQLDTGDRTHAAQLLQEQLSR-PSG
VDDRTRGRALRLLA-ATVGADHRRKMLAEAVNLLQGCGDRPELARALHDTSQMLQQS-AD
SARARRFVRRAHQLTRDT-G---VPAVKRPLV----------------------------
------------RREPAS--------------------------KEPERTVEEPRETEDE
LLSEAERRVAVLAAQGCTNRQISTKLFITVSTVEQHLTRVYRKLDVKRRTDLPKRLVAYE
GPLAEGRVQRTEAC--------------
>NZ_ADBZ01000012.1|c1|39080-41902|-|ZP_06217040.1|transcriptional_regulator,_LuxR_family
------------------------------------------------------------
-------------------MLVQQEE--------QITRLRRVFHACEE-------QQRGH
VALVTGAVGSGKTSLLESFGEWTAGS----------------------------------
----------RGQVMSATGSRAERGLHLGVVGQLFHSA-RLAPETAAHVEKLLRDATSAV
PLPEVGG-------------------------------EA---------SDGDRAWAPLL
HGLFTTLID-----LT--A-NGPLVL-----------------------LVDDVHHADPA
SLHCLLYVTR-RLRHARIMV--VFA--------EAS-TLRPPHPLF---RAELLSQPHF-
SRI--GLPPLTVDAVAR-LV----------EGAVDDADTRA---TAEHYVRMTGGNPLLT
RALLDE------RAG----------------GEGSDHDVPSVG------GA-------FD
QAVLGCLYRHE-PGVRR----VAQALAVL------DRP-ASTEL----LGHLLDVMPATT
VPAVRVLRTSGLM---------ECD-QL--RHSRILRSIL---ADMSADERRSLHQRAAE
VLHDR-GAEASVVAEHLVAA--GA------AVTGWRVPVLQDAAGHALSSG-RPDV----
-----ATACLRLLARAPVD------EQQRT------------------------------
---------------ATTEMLVNARWQINPLTVNGQ-LTELVQTARAA--GWSTDASLSA
V-PYLLWQG--RID----EAAEAVSGFSADEEQGPAA------PPGRLRIMQLLISLSHP
D-----------------------------------------------------HLANVR
QTPATWSRAAGAPTTVSPLLQAVTVLGAALTP-------------------------TAD
NDTVTTAEQILQRHH-----TDDGA---LGLLTAPLLALLWAGRSDRAAVWGDVLLDR-P
VAQ-HAPGWRAVIR-AIRAEAALRVGDLPGAEHHARAALEDMPAPAWG--VA-IAGPLST
LIASATESGRFAEADRWL-AHP--TPPGMFRTPLGLH--YLAARGRH-HLAVRRPHAATT
DLRRCGELMRTWGIDAA-G------LVPWRLELARVQLSVGNKTQAMQLLQEQLRV-PHG
VDDRTRGRTLRLLA-TTAAQDHRRKLLSEAVNLLQSSGDRLELVRALGDTGQTLQRA-GD
SARARLLVRRAYQLAQDC-G---ASVLAQRLI----------------------------
------------RREPGS--------------------------GLPAYPAAAELQEPDD
GLSDAERRVAALAAQGHTNRQISSRLFITVSTVEQHLTRVYRKLDVKRRTDLPSRLVMYA
ETLADETQSATS----------------
>NZ_ADGV01000039.1|c1|55132-57954|-|ZP_06399912.1|transcriptional_regulator,_LuxR_family
------------------------------------------------------------
-------------------MLVQQEE--------QITRLRRVFHACEE-------QQRGH
VALVTGAVGSGKTSLLESFGEWTAGS----------------------------------
----------RGQVMSATGSRAERGLHLGVVGQLFHSA-RLAPETAAHVEKLLRDATSAV
PLPEVGG-------------------------------EA---------SDGDRAWAPLL
HGLFTTLID-----LT--A-NGPLVL-----------------------LVDDVHHADPA
SLHCLLYVTR-RLRHARIMV--VFA--------EAS-TLRPPHPLF---RAELLSQPHF-
SRI--GLPPLTVDAVAR-LV----------EGAVDDADTRA---TAEHYVRMTGGNPLLT
RALLDE------RAG----------------GEGSDHDVPSVG------DA-------FD
QAVLGCLYRHE-PGVRR----VAQALAVL------DRP-ASTEL----LGHLLDVMPATT
VPAVRVLRTSGLM---------ECD-QL--RHSRILRSIL---ADMSADERRSLHQRAAE
VLHDR-GAEASVVAEHLVAA--GA------AVTGWRVPVLQDAAGHALSSG-RPDV----
-----AAACLRLLARAPVD------ERQRT------------------------------
---------------ATTEMLVNARWQINPLTVNGQ-LTELVQTARAA--GWSTDASLSA
V-PYLLWQG--RID----EAAEAVSGFSADEEQGPAA------PPGRLRIMQLLISLSHP
D-----------------------------------------------------HLANVR
QTPATWGRAAGAPTTVSPLLQAVTVLGAALAP-------------------------TAD
NDTVTTAEQILQRHH-----TDDGA---LGLLTAPLLALLWAGRSDRAAVWGDVLLDR-P
VAQ-HAPGWRAVIR-AIRAEAALRVGDLPGAEHHARAALEDMPAPAWG--VA-IAGPLST
LIASATESGRFAEADRWL-AHP--TPPGMFRTPLGLH--YLAARGRH-HLAVRRPHAATT
DLRRCGELMRTWGIDAA-G------LVPWRLELARVQLSVGNKTQAMQLLQEQLRV-PHG
VDDRTRGRTLRLLA-TTAAQDHRRKLLSEAVNLLQSSGDRLELVRALGDTGQTLQRA-GD
SARARLLVRRAYQLAQDC-G---ASVLAQRLI----------------------------
------------RREPGS--------------------------GLPAYPAAAELQEPDD
GLSDAERRVAALAAQGHTNRQISSRLFITVSTVEQHLTRVYRKLDVKRRTDLPSRLVMYA
ETLADETQSATS----------------
>EU874252.1|c1|1954-2265|+|ACJ60944.1|Veg2
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
-----------------MNA----------RLDVWLPRQKDVNGGNSAVSN---------
-------------------------GPAQP------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
PLTRAELRVAALAAEGCVNREIAERLYITPSTVEQHLTRVFKKLGITGRDSLPSALPSRS
LQDRGARGKGESRR--------------
>AL078635.1|c1|30677-31126|+|CAB45048.1|putative_transcriptional_regulator
------------------------------------------------------------
------------------------------------------------------------
-------------MIITSAGLRLGDM----------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
----------------------VVT-----------------------------------
-----ESGTMRPRAVSAEIR----------------------------------------
------------------------------------------------------------
-----------------------------------GDA----------------------
-------------------------------------------ATMPE------------
------GRGPVKRPDGLTSQ----------QREVWL------------------------
-------------------------PRQQN------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------A-----------------------------------------
------GRDARDAA----------------------------------------------
-------------------G----------------------------------------
--------------------------------------------------------PAHA
PLTRAELRVAALAARGCVNREIAERLFITPSTVEQHLTRVFKKLGITGRDFLPTSLSAVS
WQDSGAPRKDG-----------------
>AJ561198.1|c1|8760-11363|-|CAD91198.1|putative_regulator_LuxR_family
------------------------------------------------------------
-------------------MLFGRDR--------ELKSLTRLLDSTAA-------G-RGG
VAVITGPVVGGKTAILHELGMRSIAA----------------------------------
----------GIRLVTARCTPAEQSLDWGVADQILGRG----------------AAERLT
ARRGGDA----------------------------------------------------V
EDVCVSLFQ-----MA--E-ANPILL-----------------------TIDDVDLADDP
SLLAILSMTP-LLTDTRMMI--AVT--------ICQDRPPAPLPHV---AESLLRLPGI-
ELV--ELPLLPRPAVRQ-FA----------TEHLGAETADQ---LADDLYRFSGGSPLLV
RALIEDQ-----EAG----------------APGLVVGDS------------------FM
SAVAACVHGCE-PEAVR----VAEAVAVL------GEH-ATPDA----VGELVGIAPPAA
TRSMGMLERAGLL---------AGG-RF--RHEAGRLAVL---GRMTSYGRMEILRRAAE
ILHRR-GGPPSAVATRLLEA--GW------SGEEWAFDVLVEAGRQAFDEG-DFVA----
-----VMKCLRLALASGWG------TPRRL------------------------------
---------------DVKVMLAAAEWRVDPAVAARH-VPDLLDATRSG--ALRGSHGMEL
F-RQLLWYG--RFA----DAAELIDRLRPSV------------ADRDADASLIAMCHVHP
------------------------------------------------------VLLDRL
PRSAR----------------------------------------------------GSM
GQTVEDARRILRQAE-----PTDEA---MDSIISALMALLLGGVSEVAAS-CETLLKE-P
GVT-KAPTWKAIIS-AIRAETAWRKGDLAGAEAHAQEALTILQPSGWG--VA-IGAPLST
LLHAQTAMGHLDEAKATV-AVP--MPRETAETAFGIG--YELARAHY-HLVTEQPRAAFA
GFLACGQAVQRWGSSLS-D------VVPWRLGAARACLQLGWRRRAADLVTAQIAH-TSS
GDLRTYGVALRLHA-QLSKPAQRQRLLMQSVDALEAAQDRYQLALSLCDLAGTPQLK-GG
KDEARAYWVRAQELAREC-N---AKPLMRRLA----------------------------
---------------------------------------------------AQHDHGETA
PLSGAERRVAVLAARGHTNREIAEALYITRSTVEQHLTRIYRKLHVQTRGDLGNLFAADI
ADKATATAGREPREAVRL----------
>NZ_ACEX01000665.1|c1|1999-4707|-|ZP_05519895.1|LuxR_family_transcriptional_regulator
------------------------------------------------------------
-------------------------------------------MQSAR-------G-RGA
IAAVSGSTAMGKTTVLNALAERATAA----------------------------------
----------GSTVLGVVSSPHERDVPYSALAQLFHAI----------------DARSVP
PVAQGDS-------------------------------------------------LAVA
QHTYQIIAD-----LA--A-RRPLLI-----------------------TVDDIQHTDTA
SLSCLRYVAQ-RLNRLPLAL--VFT--------RGV-SVEEQPPRI---LHDLLYRTSV-
RRF--HLGPLSRAGVRE-LA--------------PSPPADR---FIAEIHTLSGGNPLLA
QALIEEHRLRAAPES------------SAGAAPSEGDGTAPLP------EGGVAIGPVFQ
QAVLAYLHRIG-PRAVL----LARCVALL------DEA-ATPLL----LSRLSGIDTELL
KRYLRLLTGIGVL---------NGA-RL--RHAGVRQAVL---GEMPHGEATDLRYRAAR
LLYDS-GAPPQAVAAQLLGV--GP------LYEDWVLDVLREAACQALDEG-DVHR----
-----GIRCLELARECCVD------EGQRL------------------------------
---------------AVKSQYACGQWQLRPADSAPH-FLALKGPIVEG--KLTGDDALWA
A-EGMLFHL--GFD----EALVAVDHLNDGDEE----------MATALHGTRMLMASEVP
G---------------------------------------------------------VL
DRLSRPLPDTAAPATSHSELRARHALALVMER-------------------------GAD
EYAIALAEQVFQSSQ-------NAVTSQLSSLPKALLALCYADRLDAAAKWHDHLAGD-A
GRH-DAPAWRAQIA-CVGALVSLRRGRLADAVHQAEAAYARLSGPRWN--VS-SALALAI
LVEAHTAMGDHQAAAGYLAPEP---PPELFLTRAGLH--YLYARGRH-HLATGNTYLALS
DFQGCGSLMRRWNVDTP-S------VAPWRLGEAEAWLRLGDRERAARLVEKQLAR-PDT
GLARSRGMALHGLA-LVQPTAQQPPVLRDAFRLLESSGARYEAAAVLADLSRAYQQL-GD
-KRARPTARRAWRLAKSC-Q---AEPLCQELL----------------------------
---------------PTSTPRSIGTRG-----------------GSGSGESDRTDQGGFG
GLSESERRVAMLAAQGYANREIADRLFITVSTVEQHLTRVYRKMGIRNREQLLQGAHAVS
YESA------------------------
>FJ872523.1|c1|3578-6433|+|ACO94455.1|LuxR-type_transcriptional_regulator
------------------------------------------------------------
-------------------MLKERDK--------ILEQLDALLIQSTR-------G-RGA
IAAISGSTAIGKTTTLNALAERATSA----------------------------------
----------DITVLSVVSSPHEREVPYSALAQLLHSI-EAQCTTADVPRAGGAGTVHAG
RQADEAA--------------------------------------ALAPPLAQDDPMTVA
RRTYQIIAE-----LT--A-LRPLLI-----------------------TVDDIQHTDTA
TLTCLRYLAQ-RLTQLSLAL--VFT--------HGI-SVDEQPARV---LDDLLYRTSA-
RHF--HLEPLSRVDIMG-LA----------ANRLPVLPSDR---LIVEIHRLSGGNPLLA
QALIEEHRLRLASDS----------VAGPMPPQSDGIGRRSTT------EGGASIGPAFY
QAVLAYLHRLG-PRAVR----LARCVALL------DEA-TTPLL----LSRLSGIDTELS
KRYLRLFTGLGVL---------EGA-RL--RHAGVRQAVL---GEMPHGEATQQRYRAAR
LLNEG-GAPPQAVAMHLLGV--GP------LHDGWVLPVLQEAAAHAMEDG-DVPQ----
-----GIRYLELACECSLD------EGQRL------------------------------
---------------SAKSLYAFGQWQLRPAESAPH-FRALKGPILEG--KLTGTDALWV
A-EGMLFHL--DFD----EAVEVVDHVNSGEAD----------MSTALHSTRMLMAAEVP
G---------------------------------------------------------LL
ERLEHPLPATTAPATSHSELRARHALALILEN-------------------------GAD
KYAIALADQVFQGSQ-----NWPTS--KLSGLPKALLALCYADQLDTAAAWYDLLAAE-V
ERH-DAPGWWAQIE-SVGALLALRRGRLADAVRQAETAHARLSGPRWN--VS-SALALTV
LIEAHTAMGNHQTAAKYLETSE--PPPALFLTRAGLH--YLYARGRH-HLATGNTYLALS
DFQECGTLMRRWNIDTP-S------LAPWRLGEAEVWLRLGDQKQAARLVEKQLAN-PDA
GLTRSRGMTLHALA-LVQATAKQPPILRDAFRLLEAAGARYEAARVLADLSRAYQQL-GD
-KQARPTARRAWRLAKSC-Q---AESLCQALL----------------------------
---------------PTSIPQNMDTKP-----------------SEGSCGADRAGQDSFG
TLSESERRVATLAAQGYANREIAERLFITVSTVEQHLTRVYRKMGIRNREQLLQRAHAVS
YESV------------------------
>FJ872525.1|c1|3783-6638|+|ACO94482.1|LuxR-type_transcriptional_regulator
------------------------------------------------------------
-------------------MLKERDK--------ILEQLDDLLIQSTR-------G-RGA
IAAISGSTAVGKTTTLNALAERATSA----------------------------------
----------GSTVLSVVSSPHEREVPYSALAQLLHSI-EAQCVATDGPGNGGPGSLRPG
RQAEVAA--------------------------------------ALAPPGANDDPLTVA
RRTYQVIAE-----LT--T-WRPVLI-----------------------TVDDIQHTDTA
TLTCLRHLAQ-RLTQLSLTL--VFT--------HGV-SVDEQPARV---LDDLLYRTSA-
RHF--HLEPLSRVDIMG-LA----------ASRLPVLPSDR---LIVEIHRLSGGNPLLA
LALIEEHRLRAASES---------VPGPVPPQTTEGPGRQTTT------EGGASIGPVFY
QAVLAYLHRLG-PRAVR----LARCLALL------DES-TTPLL----LSRLSGIDPELL
KRYIRLFTSMGVL---------DGV-RL--RHAGVRQAVL---GEMPHGEATQQRYRAAC
LLNEG-GAPPQAVAMHLLSV--GP------LHDGWVLPVLQEAASHAMEDG-DVPQ----
-----GIRYLELACECSSD------EGQRL------------------------------
---------------SAKSLYAYGQWQLRPAESGPH-FRALKGPILEG--KLAGNDALWV
A-EGMLFHL--NFE----EALEVVDHINTGDEE----------LSNALHSTRMLMAAEVP
G---------------------------------------------------------LL
ERLNRPLPATTAPATSHAELRARHALALVLEN-------------------------GAD
KYAIALAEQVFQGSQ-----SRPTS--RLSGLPKALLALCYADQLDSAATWYELIAAE-M
EGH-DAPGWRAQIE-GVGALLSLRRGRLADAVRQAETAYSRLSGPRWN--VS-SALALTV
LVEAHTAMGNHQAAAKHLAAEP---PPALFLTRAGLH--YLYARGRH-HLATGNTYLALS
DFQECGTLMRRWNIDSP-S------LAPWRLGEAEVWLRLGDREQAARLIEKQLTN-PDT
GLTRSRGMTLHTLA-LVQATAKQPPILRDAFRLLEASGARYEAAAVLADLSRAYQQL-GD
-KRARPTARRAWRLAKSC-Q---AESLCQALL----------------------------
---------------PTSMPQSMDTRP-----------------AEGSRGPDRVAQDSFG
TLSESERRVAMLAAQGYANREIAERLFITVSTVEQHLTRVYRKMGIRNREQLLQGAHAVS
YESV------------------------
>NZ_GG657738.1|c14|6118520-6121291|-|ZP_04608877.1|transcriptional_regulator
------------------------------------------------------------
--MAVSMNLALAAPGCACASLTIGNPANVSVPDEALTVLREQFAHSES-------G-AGR
LVLVTGPAASGKTQLLTRFLPYAAES----------------------------------
----------GALILHATGAPDEQRLNAGIVDQLFANS-ALPTAVADQVAAVLSLVHQAP
PGEHQPG------------------------------------------SQVEAAPAVTD
SEICRILLG-----LT--R-TQPVVI-----------------------GVDDLHFADES
SVRILLRLQR-RIRSSRLLM--LVS--------HPD-AAGAAERQL---LGLFTRVAH--
DHV--RLGPLSAPALGQ-LA----------SALLDEPVDAE---LTGRLHELSGGSPMLV
NALLEDY-----RRS-------------------ERDGQPVTG------PA-------FV
HAVSTFLQRRE-PPLHQ----VAAAIGML------GDE-LSRDT----IAGLAGVTEDIA
EDMTAVLAGAGLL---------AHG-RF--RHAVAAAAAV---DSLPPAARAQLHVRAAK
LKLRQ-VAPASEVAAHLVAA--GQ------PAPAWGVDVLRRAADRAAQAD-EIGF----
-----AVRCLDLALSAAPE------PGQRH------------------------------
---------------AILDALARIVWRVNPSAAAAY----LTELRHDP--ETVGTEPFTL
A-RHALWNG--EAD----LFGKAVADLARCPDRFDAP------AAAKLTLAAQWH-----
---------------------------------------------------------FGR
CEVRVEPPADPAPRHSDPWRHTAAALVGMWTV-------------------------GSS
DATTASAEQILRNCP-----LADIT---LESLLTAILALAYDNRSKRAEYWCAMLSQQ-A
ARR-GAVAWQALID-GVWSGIVVRRGDVAQGVTRAHAALRLLDTQSWG--VS-ISYPLTT
LLVANTAAGAFDAAAATL-REP--VPDAMLGTIGGLR--YLRARGQF-HLATDRVLAAIS
DFQRYRRLMARAKLDHL-S------LLPWRTDLAEAHLRLGHLVAARELAKQQLER-CAE
TDTYGRGSALRILG-MLAVPAERPILLGQAAECFKRSGDLLELARKLKVPGQELPQPVDQ
TEPALVGAPKALRVVS--------------------------------------------
--------------------------------------------APDTPAAASGELPESG
VLTEAELRVAQLAALGETNQQIGSRLFITVSTVEQHLTRVYRKMRIRGRSQLAEQLASSV
FGAAG-----------------------
>NC_010572.1|c22|7286041-7288788|+|YP_001827689.1|LuxR_family_transcriptional_regulator
------------------------------------------------------------
------------------MVVIEKFV--------ELQSLKRMLNECAV-------K-GRT
VALVTGSGGVGKTTLLSNFSGYAESA----------------------------------
----------GALVLSAAGAHSGQDRSLGMLLRLFRSV-ELEAGQEARIERLLTLPEGNS
QGSSPSA--------------------------------------------------CAV
DELTEILLE-----AA--D-GRPLVL-----------------------AVDDTQYADPA
SLHALLLILR-RLASSPVVA--VFT--------EWR-IFSSKPPLV---LAEFINQPYF-
HLL--NLQPLSLDGVSGWLR----------RRRLGEATAEF---LAPSFLAATGGSPLFL
QVLFQDQ-----RRA------------FHEREPGDVDSLSAMD------AALKGTH--FK
VAVEACLHRWD-PQLLD----VARGLAVL------GAP-ASADV----LARLLDSEQRTV
VEALDALAATGLL---------RSG-WF--SHQAARAAAL---SGLDGETLTALYERSAL
LLHSD-GAVPSEVAERLVAA--GG------IAEDWSVDVLRNAAWQALREG-NPGR----
-----AAEFLEVAHQACSD------VRERA------------------------------
---------------EVLGALARVLWLTKPTAVTSL-LEPLCRSLQQG--NLSVRDSVAL
S-TFLAWQG--RAD----EAALVLGQVDTRGDTCDLA------GEAELALARQWIRWVVP
F--------------------------------------------------------KGT
DAADEASPAYRVEEAAER---------------------------------------ASW
SDLVRSAEQVLQCCR-----IADAL---PVVVLSALLVLAFDDKLDEAQRWCETLGPE-A
EAL-QAVAWVAMLA-TVQGLVAVRRGDLIDAERHSRRALTVMPQHNWG--AA-LGLPLSG
LVHATTAMGRTDEAETLI-KEA--LPEA-RRNPFWLH--FLHARGRF-YLENNRPYAALA
DFQTCGRLLGGTPLGHA-N------FVSWRCDLAEAWLRLDDARSGKALLEEQLTR-VNA
DDKRVRGRTLRIMA-ATLKQPARASMLREAVKVLLDSGDRLELALALADSSEAELEC-GR
FAEFRLISHQAKRMAKMC-G---AEPLYWRLQ----------------------------
---------------NSGSVE-----------------------EPGETPALRKTIHQFA
LLSDAERKVAALAAQGRSNREISQTLFITVSTVEQHLTKTYRKLGVSSRFGLPVELGLVG
SADH------------------------
>NZ_ADFC01000072.1|c1|17122-19869|-|ZP_06283113.1|transcriptional_regulator,_LuxR_family
------------------------------------------------------------
------------------MVVIEKFV--------ELQSLKRMLNECAV-------K-GRT
VALVTGSGGVGKTTLLSSFSGYAESA----------------------------------
----------GALVLSAAGAHSGQDRSLGMLLRLFRSV-ELEAGQEARIERLLTLPEGNS
QGSSPSA--------------------------------------------------CAV
DELTEILLE-----AA--D-GRPLVL-----------------------AVDDTQYADPA
SLRALLLILR-RLASSPVVA--VFT--------EWR-IFSSKPPLV---LAEFINQPYF-
HLL--NLQPLSLDGVTGWLR----------RRRLGEATAEF---LAPSFLAATGGSPLFL
QVLFQDQ-----RRA------------FHEREPGDVDSLSAMD------AALKGTH--FK
VAVEACLHRWD-PQLLD----VARGLAVL------GAP-ASADV----LARLLNSEQRTV
VEALDALAATGLL---------RSG-WF--SHQAARAAAL---SGLDGETLTALYERSAL
LLHSD-GAVPSEVAERLVAA--GG------IAEDWSVDVLRNAAWQALREG-NPGR----
-----AAEFLEVAHQACSD------VRERA------------------------------
---------------EVLGALARVLWLTKPTAVTSL-LEPLCRSLQQG--NLSVRDSVAL
S-TFLAWQG--RAD----EAALVLGQVDTRGDTCDLA------GEAELALARQWIRWVVP
F--------------------------------------------------------KGA
DAADEASPAYPVEEAAER---------------------------------------ASW
SDLVRSAEQVLQCCR-----IADAL---PVVVLSALLVLAFDDKLDEAQRWCETLGPE-A
DAL-QAVAWVAMLA-TVQGLVAVRRGDLIDAERHSRRALTVMPQHNWG--AA-LGLPLSG
LVHATTAMGRTDEAETLI-KEA--LPEA-RRNPFWLH--FLHARGRF-YLENNRPYAALA
DFQTCGRLLGGTLLGHA-N------FVSWRCDLAEAWLRLDDARSGKALLEEQLTR-VNA
DDKRVRGRTLRIMA-ATLKQPARASMLREAVKVLLDSGDRLELALALADSSEAELEC-GR
FAEFRLISHQAKRMAKMC-G---AEPLYWRLQ----------------------------
---------------NSGSVE-----------------------EPGETPALRKTIHQFA
LLSDAERKVAALAAQGRSNREISQTLFITVSTVEQHLTKTYRKLGVSSRFGLPVELGLVG
SADH------------------------
>NZ_ACEZ01000037.1|c1|7257-9980|+|ZP_05529771.1|regulatory_protein,_LuxR
------------------------------------------------------------
------------------------------------------------------------
-------MGSGKTSLLEALTDDLSDE----------------------------------
----------VAQVLRAVASEAERDIPFGVIGQLLHGA-HLPEQARQEVRDLLPEHTDVA
RLSGRPS---------------------------------------AVDRISPVEQAPVL
SRLFSTLSD-----LA--R-RGPLVL-----------------------AVDDIQHADSA
SLQCLLYVIR-RLRYSPMLV--LMT--------EAP-MLRLPHPQF---RAELLSQPHS-
SRI--TLEPLTQDSLAL-LA----------SAHPGTTDARG---TAEHVLAVTGGSPLLA
RALMDEL-----PAR-----------------HAEADGTPPSR------------GGLFD
QAVLGCLYRHE-PQVRQ----VAQALAVL------GRA-TTVDV----LATMLGTTHESA
LRALHLLRVSGLV---------EGY-EL--RHPRIARSVL---GDLTAEHRRVLHSRAAE
VLRHQ-EAGSNVLAGHLIAA--DW------VEGSWAAPMLQEAAVHALASG-RPEF----
-----AGACLRQAWRAETD------EEQRA------------------------------
---------------GIEALMLTARWQTNPLSAETY-LPDLLETIRER--GPSLPRVASV
L-PPLLWQG--RVG----EADDLLAQLELGEEQDTE-------DAAELRVLHLLVSLCRS
------------------------------------------------------EVLADA
HCTDGMYSGASGTPVVSQRLEAVTVLHQALTS-------------------------NPY
CDVVSRGEQILRRHD-----GRTGA---PGLPAGALLAMLYAGRPDRVVAWTDTVLDE-A
GVR-YAPVWQAVLE-AIRGEALLRLGDLGRAEQCARSALELITPQGWG--VV-VAGPLGT
LITCAAESGRHHEADMWL-ALP--TPVGMFQTPLGLH--YLAARGRY-HLAAGQPDAACE
DFRQCADLMEKWRLDIA-G------LVPWRLELARAQLRLEHRAEAARLIQEELSG-DRR
TDRRIRGRGLRLLA-RTVAPEQRKRLLSEAVDLLQACGDKVELARALRDLGTVLQQMPGD
PGQAHPLMRRAYQLARES-G---AQSLANRLV----------------------------
---------------PGG--------------------------CVPESEPERDVPQSGY
GLSKAELRVAALATLGHTNRQISTVLFITVSTVEQHLTRVYRKLGVKRRADLPAELSVYA
EDVGEAPRGDGHGF--------------
>NZ_ADDL01000006.1|c1|160751-163708|-|ZP_06235318.1|transcriptional_regulator,_LuxR_family
------------------------------------------------------------
------------------MVLVERGR--------ELSSLTSLLDRLVH-------G-LGG
LIVISGSLGMGKSELLLACAEQAAQA----------------------------------
----------GAVLLTAVGSSSERSLPYGILAQLSNSP-AGTPTMAELARRLQDGVNGDR
DGHGTRA-------------------------------VT-------GEEPVAPREAAVL
DLLWTELRR-----VA--E-GRPVLI-----------------------GVDDVHFADPL
SRQALLYFLR-RSWPSRTLF--VIS--------ESA-DAWPGHSAL---RSELLRMPHR-
CRL--RVRPLSAAGVAE-VV----------RAHVGMPPPST---AARAYRAATGGNPLFL
RALLDDD-----HVQ------------------GDVPAWPSLP------EDLHASDL-YT
QAVLACVNAGA-APMAA----VARGLAVL------GDA-TG-------LDRVLDLDTPVV
ELAVRRLTSMGVL---------DGA-RF--RHPAARAALL---DDLPPRERARLHRRAGQ
LLYER-GAPATDVARHVLAA--GG------SDEPWAGRVLVEAAAQASTSS-DLEG----
-----AVAALELA-AGSAR--H---AARRA------------------------------
---------------ELTASMARLEWRANPAAAARH-LSQLTAAVHAG--QLSGSDTAEL
V-GFLLWHG--QLD----EAGTLLASPPGPDV-----------TRADLAEVREWSWMSFP
SVA---------------------------------------------------PERSRA
LAGSAAGVGVSTADAAGRRPPARTSERAMLLE--------------SVVA-------GRF
EQASRAAERLLDGLE-----LDDAG---VDSAVAALAAMTFAERYDRASYWATRLAAT-M
STS-EAPTWRARVA-AVSAELAFRKGDLPAARRLVDEAFTHVPPHGWG--VV-VGLPLAT
QAATATAMGDYLRAAQAF-AVK--VPETMYETRFGLH--YLHARGTY-NLSLGRARAALG
DFLACAHRMRSWDLDHP-A------LVPWRTAAAEAYLRLGDPDQARGLAQEQLAR----
FGGRSRGLSLRLMA-ALSPGPRRAPLLEEAADVFAQWGDRLQLAWTLADLDRAYREL-GN
GDEARHARSRAMRVADAC-H---AAPVVQSLLDVPSADPGAGRAAVPRQPVASGPDRPAK
AAAGMVPPAPGAAARPVEPARPGGGAPATRP-------------AREDGSDAPARNAGLD
ALSTAEQRVAFLAALGHSNREIATCLFITVSTVEQHLTRVYRKLDVRSRKELTGAVPTNE
DR--------------------------
>DQ149987.1|c1|559-3324|-|AAZ94383.1|putative_LuxR_class_regulator
------------------------------------------------------------
------------------MILIDREE--------ELCALHDFLSESRQ-------G-KGH
VVLVSGSAGIGKSELLYAFAEEASAT----------------------------------
----------GSEVLRAVGREAERDVPFGVVHQLVRDI-SLPAPLRTRMTELESSLASGP
TAPHESA-------------------------------AL---------------QAHVA
RGLCRELLH-----AA--G-AGGLVL-----------------------CVDDIHHADSA
SLSCLLHLLP-HTRSARLML--VLS--------RPD-SARHRPPLL---SAELLRHPFY-
RRV--RLSPLSLEGTTE-LT----------AKTLGTQEAQA---HGAVYHSLSGGNPLLV
RALLRDH-----RDR---------------SADGDAEPEVPSA------GEE------FA
QAVLACLRGGE-PLVLG----VARTMAVL------DSC-SSPDR----IGRLLHLGPSSV
ADALRHVEAAGLV---------AGG-CY--RHPAARSAVL---DDIPRGVLRRLRLDVAE
LLHHE-GLPTPTVARHLVAV--RH------VPACWAVPVLMDASEHARRSG-DVGF----
-----ALECLELALSGSDD------VRERA------------------------------
---------------LASMMLARLEWQLNPSTVGPR-LGPLSEALLTG--VLPAELTVPL
S-RALLWHG--RSD----EAAELIRTLGPKAPG----------PHGLFPENREWLRNRYP
TM----------------------------------------------------VSLLPT
AEDGPGGRDGREPATARPVLLAETVLGSTLRN-------------------------GGD
ESSAWSAEQVLRSCG-----LDEAN---LYALESALLALVYADRLGQASIWSAKLLQE-A
TVR-QVPTWQAKIT-AIRAELALRQGDLNEACALARRAMTHLSPRSWG--VA-VGAPLST
LVLAATAMGADGVAEEYL-RHS--VPEAISESRYGLQ--YLYARGQH-HLATNQVHAALD
DFLRCGDRARAWDMDLP-S------FLPWRSGAAAAHLRLGQRDQVRRLAEAELAR-PGS
AKSRSRGVAMCLLA-EIAEPRRRTSLLLEAVSVLRLAGDRLELARALAALSSAQRAI-GE
ADQARRALYQALHLADVC-G---AEHLQPSPQ----------------------------
-------------------------------------------LRGREETPADPITAPRD
PLSAAERRVASLAALGHSNREIADQLCVTISTVEQHLTRVYRKLNVTRRADLPSEFQTLT
AGSV------------------------
>NC_013929.1|c23|9303982-9306753|-|YP_003493859.1|putative_regulator
------------------------------------------------------------
------------------MILIDRKD--------ELSALREFLADSRH-------G-NGH
VVLVSGSVGIGKSELLYAFAEEASST----------------------------------
----------GSEVLRAVGREEERDVPFGIVHQLVRDI-SLPAPLRAQMTVLEDSFASGH
PPARHES---------------------------------------------ATLQAHVA
RSLCRALLD-----AA--G-AGGLLL-----------------------CVDDVQHADSA
SLSCLLQLLP-HTRSAPVML--VFS--------RPD-SARHGLPLL---STELLRHPFY-
RRV--RLAPLSPEGTTE-LT----------TKALGTEEAQA---LGPVYHSLSGGNPLLV
HALLRDH-----RDR---------------QADGDGDAGSEVP------PAGEE----FA
QAVLACLHGRE-PDVLG----VARTMALL------DSC-SSPDR----IGRLLRLGPSSV
ANALRHMEAAGLV---------AGH-RF--RHPAARSAVL---DDFPWGLLRRQRLDVAE
LLHHE-GLPTPTVARHLVAV--RH------VPPGWAVPVLMDASEQARRSG-DVGF----
-----ALECLELALSGSDD------AREQA------------------------------
---------------LTTMMLVRLEWQLNPSMVTPR-LGPLCDALLTG--VLPARLTVPL
S-RALLWHG--RFD----EAAEVIRALGPKVPG----------PHGQVTETREWLRNRYP
V-----------------------------------------------------MVPLLP
AEDGPGIRDSREPAAARPLLLAETVLGSTLRN-------------------------GGD
ESSARSAEQVLRSCP-----LDDTS---LYALESALLALVYADRLGQASVWSAKLLQE-A
TAR-QAPTWQAKLT-AIRAELALRQGDLPEACALARSAMTHLSPRSWG--VA-VGAPLST
LVLAATAMGADDVTEEYL-RHS--VPEAISESRYGLQ--YLYARGHH-HLAAGRVHAALD
DFLRCGDQARAWDMDLP-A------FLPWRSGAAAAHLRLGQRDQVRRLADAELAR-PGS
AKSRSRGVAMCLLA-EIAEPRRRASLLLEAVGVLRLTGDRLELARALAALSSAQRAI-GE
AELARRALYQALHLADVC-G---AERLQPSQS----------------------------
---------------P----------------------------RGREGAPPDPVTLPRD
PLSAAERRVASLAALGNSNREIADQLCVTISTVEQHLTRVYRKLNVTRRAELPREFKALA
VGSI------------------------
>NC_013093.1|c4|3668122-3671346|+|YP_003100935.1|transcriptional_regulator,_LuxR_family
------------------------------------------------------------
------------------MRLVDRDG--------QCEALAALLEGAAG-------G-CGG
AVLLRGAPGHGKTALLGRLVALAEAAGFR--------------------CLVVEADALPE
VAEVAAEVADGGGALLVAVDDAGGADVGALLDLAAWAR-RAPAVLALTDLPRLPDDDPLG
AVARTPG-------------------------------AL------------VLDLPPLR
AETTAALLDGTPWPVT--G-GNPALVRGLARDLAAGEAGPGAAYRAALAGVLDRCGAEVA
AVAHASAVLA-VLPAGPAAA--LPA--------GPA-AVLPAGPTAAL-PGGLLPGAAL-
PHG--ALPAAARPGVVC-PD----------TAPPGGALPDG---GARSLASGAAGVRQGG
VVPLAPG-----RTGASPG-------GAEPLLLGPASGVGGDP------AGGDGTSA-SG
RMAADHVVPGG-ARLRA----PS------------GPA-APVDL----VADLLGRAPASV
ADARARLVGAGL-------------------DRADPAAVL---DVLPAARRAELHLRAAR
TLHER-GESPASVADHLVTA--GL------PAPAWAVDVLVAAADHALAAD-DVPT----
-----AVDRLAAAHRRDEA--D---PPRGVHPRGVPDPAVAARRCGCADRTAAPADRRTS
PEPTALSEPAAVVGPALTARLARARWQLNPAAALCH-LDPLADALAADPAALAPRDAAAL
V-RQLVWHG--RTA----AAGRVLAALRARE------------HAAELPDLETWLSLACP
PLAASRRTAFSRTAFSHTAFSHSAARHGSALPPNALHPGALHANAPHTSASHTAAHQRGT
PHPAALNPTTPPPSRVDPWLREAASLVGGFVL-------------------------GDQ
RRAAAEAAHYLRHAQ-----LSHTSPWSEEPALLALLALVRADRAVEADRACARLLDE-A
RSR-RAPTWVASFA-AAASVIALRLGDLAGAAGHARAALDAVPAHGWG--AG-VGLPLGS
LILADTLRGRRREAGRHV-TAP--VPDALFDGPAAPH--YLHARGHH-HLASGRDHAALA
DFLACGDLLRSWSLDLP-G------LAPWRTGAAEAWTRLGNHDRARRLVFDQLAT-TGA
DAGRPRALALRALA-SLSPPTRRPHLLAEAADALERCGDRYELAATLACLGAAHHAL-GD
HRRARAVLRRAWHLARAC-G---ARPLCARLE----------------------------
---------------P----------------------------DAADPVAH-----DTS
GLTGSERKVAALAVTGLTNRQIAEKLFVTPSTVEQHLTRVFRKLRVTHRTDLPTTLHADL
TTPA------------------------
>FN433113.1|c1|1429-4260|+|CBA11556.1|LuxR-family_transcriptional_regulator
------------------------------------------------------------
------------------MTLVGRKE--------ETTVLRRMFADVQC-------G-RGG
VIIVTGSAALGKTGMLHAAAEHALQS----------------------------------
----------GARWLSATACSSEQALPLGVMSQLLRSAPLDEPATRRAEQLLREGAVPAA
DGPDAAE----------------------------------------------GRSARIH
QGLCEVLLT-----LA--A-ETPLVI-----------------------TVDDVHQADTA
SMRCLSHLTR-RLRSARIMV--VLS--------KQL-EAEPDLTPY----TDMSREPHV-
GHL--GLRPLTESDVAA-LL----------GRRFDDAAARR---LAPAVLAVSGGNPLLA
TVLADAT-----------------------GSARAGRTGRAAV------PAEPVVDEMFR
QAVLTCLRRGD-AKTGR----VARALAVL------DDA-WSFDV----LCRALDIDTLCA
ERAVRILEAAGLL---------VAG-RF--RHPAMRSAIL---DGMPAEERTRLHRRCAR
LLHDT-GGPALDIARQLIGA--GG------APDPEAVPVLREAAEQALAGD-DAAT----
-----AIRCLELAHRAALD------NRQHV------------------------------
---------------AVIADLARAELRVNLPAATRH-LRSLLAPARDP--HQRSAGVLAV
IRRHLLWSV--EER----QAVEALRAPGPSGAGEDRQ------LAAERHLSRVWLGCTFP
SLV---------------------------------------------------KELPAC
PSESAPDGSTPATIALNPELLAATLLSTALRD-------------------------EDG
KDVVADAEHILQNSA-----LSDHT---FEMLAFAILALFHADRLDKAAVWCRSLQAQ-A
VAR-RAPTWQAVFA-ALQAQIALRQGELSAAEEHARAALRLIPRRIWG--PF-GFLASSA
MALACTAMGKDTEAADQL-SGP--LPETAFDSLYGLY--HLHARGQH-HFANNRLQAALG
DFLACGELMTDWGVDVP-T------LVPWRSAAAEVLIQLGDRARARELLDAQLAR-PRA
NGPRLRGTTLRLLA-ATVELQRRPALLTEAVEELQSAHNPYELARALADLGDAHRAL-GA
AGRARMVSRQAWNAARHC-Q---AEPLLRRLK----------------------------
---------------PTGGAE-----------------------EVDRPLRVQAGPADIA
SLSSAERRVATLATLGYTNREISRKLHITVSTVEQHLTRVYRKLNVRHRTEIPSDLDLVV
DSRRVGAERPVG----------------
>AJ605139.1|c1|70502-72880|+|CAE53370.1|transcriptional_regulator,_LuxR_family
------------------------------------------------------------
------------------------------------------------------------
MLLVSGAVGTGKTALLQAMAARAGRR----------------------------------
----------GGWSFVVTGSARERGHPFGVLDRLIRSM-------------CAAGMAEPF
PGGMDCG----------------------------------------------ENFFVMM
DRVGAAIRE-----FA--G-DRPVLV-----------------------GIDDVHFVDEQ
SLRAVSYLIR-RIESSGVVL--VLN--------EST-SYERDMAGL---RAEMLHLPFC-
YRI--RLTPLTSTEVAE-RL----------SERFGGVPDRA---SVQFGVQVSGGIPLIL
QALIDDL-----------------------ADSGPGVCEPGAN---------------FR
QAVLRSLHRCA-PSTTA----VAQAIAVL------GDY-AAPEL----VAELGGVDAALI
EESIRDLREMGLL---------EHD-WF--RHPHTRAAVL---AGIPVPQLPEMHRRAAE
LLHQS-GAPAGAVAEHLIAAQDGG-------RAPWRVVILSEAAREALAAG-DVDS----
-----AVLSLRHAVAASSD------ETQRA------------------------------
---------------HAGVLLAEAQWHTDPSRAARR-LGELSQDARAG--RFTGPDTLIA
V-NQLLWWG--EFA----EADELLRLAGDE-------------ECGDSSLAHLWAIF---
------------------------------------------------------SRAAGG
TEICDEHTPSGGSPLARSGPMAVVTYLSSAAS-------------------------LAS
ESVAADRTEMLLGIR---------AGAPLTPALYALVVLVQSGRLEEAITWCGRLLKE-E
WIH-RTPMRRVMIQ-TIESVAMLRAGDSAGALRGIREVFDAVPPPAWG--VV-AGLPLSV
AVRASTELGDTHAARSYL-AVP--VPPAMFDTPFALP--YLLALGWY-HLAMGHPESSLR
HTRSCLDLTARWGVDAG------------RITAGPAGLDVSRPS-------------PPP
AAD------------RVDAGHRTPAAVREPA---------------------------PD
QREATPVPPHA--------G----------------------------------------
---------------P----------------------------DPAEPAAAHRGAEDGA
RLTDAEQRVAALAAAGNTNRQIAERLFITVSTVEQHLTKIYRKLNLRSRSGLRRYSH---
----------------------------
>NZ_ACZH01000061.1|c1|27396-29993|+|ZP_05806327.1|transcriptional_regulator,_LuxR_family
------------------------------------------------------------
------------------------------------------------------------
------------MSLLRQLLRNGEVL----------------------------------
------------------PVPAGTARPTGRNAQLTAGN----TQPTARNSDRRPGAEFSD
PDIATTE-----------------------------------------------------
-----ALLR-----LA--DGERPLVL-----------------------AVDDAHLMDEA
SLDAVVHLLG-RSRFRPVLV--VCT--------TSG-HPGSGHSAS---HAELIRRPH--
RRV--RLGPLSERGIGE-LI----------AAQSTAPRPAV---VGRAFHRATAGNPLLA
HALLDDS-----------------------TRFGRDMDRPIAG------TA-------YR
QAVLSVVRRGE-PRHLR----VIRALAAL------GAP-ASAGV----LGELADTTPAGV
EEAVEALNSAGLL---------DGH-AF--RLPAAATAVL---EDMDPTARATLHARTAD
LLYRS-GAPAGDMARHLRAA--DR------VPQPWGPGVLRAAAEQALAAD-DVEL----
-----CSSYLNMMLRDCTD------PQERN------------------------------
---------------ALSAALARAEWRVNPAAASAH-LEPLRRPALDG--ELSMRDTATV
L-RHMLWQG--DTE----LAAETVATLVPAHSPGDAQ------ILVEVEFVRQWFY----
------------------------------------------------------GVALPA
RSPRGAGGDLRRRTPADRYGGLAAQVAVLVGG-------------------------VAT
DDSAAAVAQALQGRK-----LDHLN---LELVAMALLAIAHADRPAVAAEACDALLES-A
VER-RATTWQALLG-SVRAEIALLRGDMTTAAEGADRALSSLHDGSWG--VL-AGLPLST
AIFAHTAMGAYDEAERVL-KRE--VPEPMFRTVFGIQ--YLRARGHH-YLVTDRPFAALN
DFETCSGLMRQGNSSLQKG-------IPWRSDLALANLRIGKARTARECAEEQLRL-PGG
HSSRARAMALRMLA-ATSKPHRRALLLREAIDLLKLCGDQHTLSQAYADLSAAHYEL-GE
YARARLVARQAAREAEAC-S---VESPVDAHL----------------------------
--------------------------------------------LEDPGQCEGSEAEGSA
ILSDAECRVAGLAALGYTNREISGRLHVTISTVEQHLTRVYRKLHVASRSELPPKMLEHR
IPKLSDRWAAGHSSAG------------
>AF007101.1|c1|27469-30315|+|AAC38065.1|putative_regulatory_protein
------------------------------------------------------------
------------------------------------------MCQATS-------G-TGS
IALIEGAASTGKTELLHSFARSADGACPRRADGRGPGTDTPTDGTPTDGTPENGASAHGR
PADGGPGADGALLRLHAICSPAERALPLGVVSQLFLAP-TLPAAFRDRAAKLIDRLASTP
DTGAAER-----------------------------------------------LTAQVL
HGLCMELLA-----LV--N-RSPALI-----------------------TVDDVQHADPE
SVLWLLSLAR-RIGPAPVLV--VLA------------SDIGPHPGFSAARTELLRYPHS-
DLI--PVGRLSQRGAAE-LI----------GQRCGPSATHR---LAPAFFSASGGNPLLL
HALLDDW--------------------------RTGRNMAGRS---------------YR
QALLTSLRRGG-PAGLA----VVRGLAVL------RGY-TSEAL----LSRLVGVNVDVV
ADTVRAFEAGGLL---------SDG-DF--THPNGRAGVL---DDLPPQQRVALHRAAAR
LLQER-GEPATAVAAHIIAG--EG------ADGIPATRVLLDAAESHLLEQ-RFAV----
-----AVDCLEQALRGAGD------GRERA------------------------------
---------------AIRVRLAQVEWRSDPRATVRH-LDQLAGDARAG--LLTPGDTIEV
C-RQLLWQG--RPE----EAAALVERLRPAPDDDPAD------TDARLRAFELWLMCTHP
R-----------------------------------------------------PARRRR
PVLRGRPTAEGPADRSAPWQRFSAVLADVLIH-------------------------GRY
EEATERAEQLLHKAS-----VQRGTVWTGESALLCLMPEVYADRTERAARWCEAWRQC-P
WTA-RVPMPRAELS-AVSAEIAVRRGDLAAAVERARAALEEVSAPAWG--TA-AGLPLSS
LILAASRTGQLPIAAEYL-RVP--VPASMFESRYGLH--YLYARGHY-HLVCDNHAAALA
DFFACGELMRSWALDTP-G------LVPWRTGAAETWLRQGNREQARRLLNEQLAW-VGT
DFGRVRGQALRLLA-ACGSERQRTDLLGDAVEILEGAGDRYELARALADLSHAHHTS-GE
QRRARQTAGRAWHVARSC-Q---AEPLCRELF----------------------------
---------------PGMA-------------------------EHEVDGTGALEDTALT
FLSRAERRVATLASAGYTNRAIAEKLFVTESTVEQHLTKVYRKLGVKHREDLPALLHHDI
ATSA------------------------
>NZ_ACEV01000078.1|c1|13061-15649|-|ZP_05482476.1|regulatory_protein,_LuxR
------------------------------------------------------------
-----------MGVNWGQNRRTEPNE--------AVSLLEGLLIECDA-------G-AGD
TVLVGGGPASGKTQVQNQVVARAREL----------------------------------
----------GVLTLTATGAADERDVDGGVLEQLLASP------------ALPREVLAAA
DGEDRIA-----------------------------------------------------
-ALCSALHR-----LA--R-ERSLLI-----------------------AVDDLQHVDET
SARLLLRLQR-RARSAAMLL--VLT------------QPDGWYSGE---GVEFAAQPH--
RYV--HLTPFTVEAIAQ-LV-----------------ADHD---EAERIHGLSAGNPLLV
SALVDA---------------------------GRSSVDDSAA---------------YS
DAVQRLLHRYG-SPLRE----VATAIAVL------DTD-VTTDA----VATVAGVDPVEA
EASAGVLVETGLV---------DGV-RF--RQQPAAAAVV---GGLRGSEKVQLHIRAAE
VKHAR-GLSAPEVARHLVAA--GE------TQADWALPVLVAAAEQVMLGD-DVDF----
-----ATRCLQLAASTTTA------SWEQQ------------------------------
---------------MISQLLAKITWRVNPAAAAPH-LAALREAA-----SLDQSDRIAL
V-RQSLWFG--DRE----TFECALVRLGDDLEPLHPR------TAAELTLAAHWHYGTAP
E-----------------------------------------------------------
----------LSIDASDPWMRTATTLASVWRI-------------------------GGS
EETSVCAERILQNCR-----LSDTS---LEALATAILALAYDGKADRAEGWCSSLAEE-A
EYR-GAVTWKAMLD-ALGASLLLRRGEPAEAAEAASRALALLDEPNWG--VA-ITYPLAT
MLTAYTAAGAFKAAAGVL-RHA--LPETVYTTLGGVR--FLRARGQF-HLATNRGLSAVS
DFQQCQRILRDSNLDLP-A------VAPWRTDLAEANLRLRNPTLAVELAKQQL---SDT
TDAFSQAVALRVLA-FAGDSGARSGLLNRAAEAFKESGDRLELARTVRAINQL-----GQ
RAERSAGLVKPVQVPRQP-----MRPLTPRPA----------------------------
-------------------------------------------ASRPEPPRADPEGPAAT
TLSEAELRVAELAAHGRTNRQIAETLYITVSTVEQHLTRVYRKLGVAGRSALAGELAGAG
Q---------------------------
>FJ545274.1|c1|13164-15890|+|ACN69983.1|LuxR_family_transcriptional_regulator
------------------------------------------------------------
------------------MILVNREA--------ELGLLKSGLAECAA-------G-RAK
MIVVEGGVGCGKSELLDTFTEYATEQ----------------------------------
----------GAAVLRGMGIRSASDQPLALLRQLLGQV---------------PGWVPSE
PGVGEQE-----------------------------------------------------
--FGEALHR-----LA--S-RSPVVV-----------------------CVDDAQYGDSR
SLHHLLQAAG-FTRSARILL--VFG--------DSL-HLPRRDPVI---KTELLRQSNS-
LRI--RLGPLTKQGTAA-LL----------AAQGGDAQDRP---LVDRLHFITAGNPLLL
RALLEEC-----RPA--------------TADSGIADKIEPME------GGL------YG
QAVLASLYRSG-PAALE----LGHALAVL------DEP-RAHAI----LPRLVDQPSALI
DQNLQALTAAGMI---------AGT-AF--RHQAAVATVL---ADLAPDRRTALHSWVAV
ALHSA-GYPASVVARHLLKA--RS------AAQPWELIALRNAAEEALAED-DAVL----
-----AIDCLELAHEACPD------PVQRI------------------------------
---------------EIKMRLALITWRTNPAAAEYRHLPELLSAMRRG--ELSPTSLGML
G-KLLSAHG--RIV----EAMEVLRLSEDASCDVPRPV-----PGIHPTIASMWVRYGFH
GVD---------------------------------------------------FPDSGQ
RGGAAQGPASDSGSLVNGSVPGIPLLRKSAED-----------------------VLIAA
QDWSGSAESFLEMCS-----LTDSM---VAPVCSALKALLYSDQVEAAAQWCAKILDE-A
TRR-NIPGWQGVLA-VVQGMIALRQGKLEEAVASASMALEVVPERNGS--VL-VCGTSSI
LAMAYTEMGRYDAAVRLL-DQP--VSQDWFDSVYWLG--YLRARGHF-HLATNRSHAALS
DFLRIGNLAGSWGIDHP-M------LVSWRTDAAQAWLQLGEPSQAQQLLDAEVSQ-EFP
GYGRLRGITLRLQA-AIAPLTDRVQLLGRAVEEFDAGNDRLELAKALADLSEAHEAL-GN
QTRADLVRRKGRHLAAEC-G---ADPLYRRMA----------------------------
---------------AGGRNRMVA--------------------ADSESGSVRTEPKPGV
DLTEAEYRVASLASYGHTNREISQQLYITVSTVEQHLTRIYQKLRITRRQEIPVDL----
----------------------------
>NC_009142.1|c9|3127652-3130363|+|YP_001105069.1|LuxR_family_transcriptional_regulator
------------------------------------------------------------
-------------------------------------MLDSLERECA--------GSAGR
VALVDGPMACGKSEFLRNVVERAQRA----------------------------------
----------GFLALTAHCSRTERTLPGGVLSQLVRGI------DNRYTRLLDAGLLDSA
IALVEHD-------------------------------------------EIASELLRVF
RELCSAVLD-----RA--R-ETPLLL-----------------------AVDDAHHMDQG
SATWLLQLLR-RSQSSRVLV--VLT--------ADT-RLPAVPWPL---HSELLRQPHF-
RRI--ELAPLSAAGVGE-VV----------AERAGDLAAQR---LTADFTAASGGNPLLL
HAMIDDH------------------------LAGRTAQH-------------------HD
LALLSCLQRGG-PFMSD----VARAVAVL------GPD-ATTET----VAALAESDVDRV
GHVLRALTAGGVL---------HDG-AF--RSPQAVAAVL-----ATAENRALMHHRAAR
LLHEG-GAPVSAVARHLVQA--ED------ASESWARNVLREAAEVALLEG-KPRF----
-----AIQCLELAHGSCGQ------ESERA------------------------------
---------------AIRARLAEAEWRTSPGSVLPH-LTPLAAAADAG--RLDGSDRAAL
V-RRLLWHG--RVD----QARQVLDNLRRARRQKPDD------LAVESRDIELWLGYAHP
P-----------------------------------------------------LAAGAQ
RPVRSSRSVGFAMSSGDPWLHTTANLADVLVR-------------------------GQS
AKAVEQAERVLRDVH-----RTRGTMWCEEAAMLALVVLVHAGRVSLACDWCRKLAAA-T
SDH-QTPALQAIIA-SVRSELLLRGGEFKASVEQARAALRHLTPQAWG--VA-VGLPLST
LVLAHTRLGEHDEAARHL-VHQ--VDDAMFHSRYGLH--YLYARGHH-HLATAHPYAALA
DFTACRDLTNDWGLARA-G------LVPWRTGAAEAWLQLGNTDEARRLAYDELAQ-PGP
EQARSRGAALRLLA-ATNPPRRRPQLLNEALELLEKCGDRYEQARVLTDLSEAHHEL-ND
NRRARPIFRRAWHLAGLC-G---AASLQERLL----------------------------
---------------AVS--------------------------GDTTRGHQVAGEGRIS
SLTDSERRVASLAVMGYTNREIAEKLYVTASTVEQHLTRVFRKLQVKRRAELPVELWSAT
ARSA------------------------
>NC_013093.1|c3|3114940-3117765|-|YP_003100497.1|transcriptional_regulator,_LuxR_family
------------------------------------------------------------
-----------MATSRRRSGVIERDH--------ELGLLRALLADAVD-------G-RGG
AAVVTGPVATGKTELLTAFAGHAVEA----------------------------------
----------GAVVLGSVSSRGERGIPFAALGQALQRPSAMSSRFPEVLRLLDEAGWPAG
ARAAREP--------------------------------------------LPQVGPLIS
RTLWRAVLE-----VT--A-GRPLVL-----------------------IADDADLADEH
SLRCLSFVAR-RARGARVAV--VLA--------AQT-GTRRANPFL---LGEVHRQPLW-
RQV--RLAPLSAGAVAE-AV----------ARRFGAAAGSA-----AGWHAVSGGNPLLL
KALLEDG-----VAR---------------DGGGPAPGEA------------------FA
EAVGAVLHRCD-PELAD----VAVACAVL------DRP-AEPEQ----VADLLGVPPESV
LVRTRALDSAGVT---------VGG-RL--PHAAARAAVL---APLPAGERAALRLRAAR
RLYYG-GAAPDAVADLLLAG--GD------ALPGWSASLLLEAGTAALRDD-RVER----
-----AVAYLELGARVATG------ARERV------------------------------
---------------AVLSLLVSAHLRGGGAGCARH-VDRLLEAAAEG--GFPGPLAPVV
C--HLVRAG--RLD----DAATLLGRLAPPGGRVPLR------LRVELPFLRTWLAYHAP
GL----------------------------------------------------PARGPE
LLDDDDAEYLLREAGMSPQAQAVRVLEIALAG-------------------------GDP
EEAVEHAEHVLHGCA-----LTDRN---AEVLFSVLTALVDLDRWREALPWCEALLAE-A
GAR-DAGAWTAVLL-GVRADIALRASEYGAAIEHARRALAGVRAESWG--AM-AGRPLAT
LLHAGTASGR---CGVELPRRQ--VPEVTFRTTAGLR--YWLAKGWQ-DLAAGRLHAAAT
AFRACGELAVAWGVDAV-G------LLPWRTGVAQVLLRRGKTGQARAVLEEQLAR-AHR
GDGRVRGVTLRLLA-QTVGPAERPGLLREAVEVLERCGAVVEQAHALADLGQALHRL-GD
FDRGRVAVRRAWSLAERF-G---VGLPGERPG----------------------------
---------------QGGRDAREGGR------------------EGGREGLVERRAVEVR
RLSEAERRVAELAARGDKNQEIARKLFITVSTVEQHLTRVYRKLRVTRRTDLPGVLDLLE
VDGALSGVVSG-----------------
>NZ_DS999644.1|c2|562546-565308|-|ZP_06582590.1|LuxR-family_transcriptional_regulator
------------------------------------------------------------
--------------MGDQRGMIERET--------ALSTLQRLLEDSRG-------G-KGQ
LAIVQGPLGSGKSELMRGFLETVEDS----------------------------------
----------PTLVLSASASRWESTLPFGVLSQLFQNS-RIPHSVRADLNQMFIGLTERE
QSLDPES--------------------------------------------ADLFPVDMF
ADLHKTLLV-----LTDLAERNPVVI-----------------------GIDNLHYIDGP
SLRWLAYVLP-RLRFACALV--VLT--------DDA-ARGPADSFL---RSELLQQPNA-
QRI--PVGPLTPEGVAR-LV----------ARDLGDGAASR---RGHEFAAVSGGNLLVL
RHLIRDA-----RTG------------------DEKDGQA------------------YG
AALRSCLNRCD-PVVLT----VVRALAVL------GTR-GSPAE----LARLADVEEWEA
NRALRSLNEARLL---------DGT-AF--RHPTAAVAVL---DTMSVAERADLHERAAV
LLHGV-GAPTIAIAEQLSNA--DR------AVQPWAVDVLLAAARESLTAN-RIQI----
-----AAGYLRLAERAAAD------APTGA------------------------------
---------------SIRVRLSRIGWQVDPGSASRS-LPAVIADASAG--HLAPCDVLEL
I-WELSWYG--EVG----AVADVLDGLRGRGQGPHGV------GAEDAQGVLSWLACLYP
------------------------------------------------------SYGSVR
RPVATAPGETSGACLMAPWLTAGSLAGGFLR--------------------------GRS
DDVAAQAEQALENLI-----LENDSLWSGEVALLALLVLVYTDRLDSAAGHCDRLLAD-A
GVR-HAPAWQAAFT-AVRAEIALRQGNLKTAAREAQAALDIVPAQGWG--VA-LGLPLGC
LILAHVRMGRLDVAAKYV-AQG--FPCTMLQSRYGLH--YLYARGHY-RLASGHAQSALA
DFLACGELMDCWEIYGT-G------PVSWRTSAAEAWIKLGNQDQAKHLVRDQLSR-LPP
GSARVRGRSLRLLA-AASSTPQRPQLLEEAVDLLHDCGDKFELALALIDLSHASQKA-GD
LRGARRLARRAWHAAKAI-G---AEALCARVA----------------------------
---------------PEYR-------------------------EKYPVSARKKSPKALS
ALSKQERRVAELASEGYTNQEIADQLFITKSTVEQHLTRVFRKLNVQRRQELSQSA----
----------------------------
>NZ_ABYB01000027.1|c1|20825-23488|-|ZP_04691707.1|LuxR_family_transcriptional_regulator
------------------------------------------------------------
------------------------------------------------------------
---MQGPLGSGKSELMRGFLETVEDS----------------------------------
----------PTLVLSASASRWESTLPFGVLSQLFQNS-RIPHSVRADLNQMFIGLTERE
QSLDPES--------------------------------------------ADLFPVDMF
ADLHKTLLV-----LTDLAERNPVVI-----------------------GIDNLHYIDGP
SLRWLAYVLP-RLRFACALV--VLT--------DDA-ARGPADSFL---RSELLQQPNA-
QRI--PVGPLTPEGVAR-LV----------ARDLGDGAASR---RGHEFAAVSGGNLLVL
RHLIRDA-----RTG------------------DEKDGQA------------------YG
AALRSCLNRCD-PVVLT----VVRALAVL------GTR-GSPAE----LARLADVEEWEA
NRALRSLNEARLL---------DGT-AF--RHPTAAVAVL---DTMSVAERADLHERAAV
LLHGV-GAPTIAIAEQLSNA--DR------AVQPWAVDVLLAAARESLTAN-RIQI----
-----AAGYLRLAERAAAD------APTGA------------------------------
---------------SIRVRLSRIGWQVDPGSASRS-LPAVIADASAG--HLAPCDVLEL
I-WELSWYG--EVG----AVADVLDGLRGRGQGPHGV------GAEDAQGVLSWLACLYP
------------------------------------------------------SYGSVR
RPVATAPGETSGACLMAPWLTAGSLAGGFLR--------------------------GRS
DDVAAQAEQALENLI-----LENDSLWSGEVALLALLVLVYTDRLDSAAGHCDRLLAD-A
GVR-HAPAWQAAFT-AVRAEIALRQGNLKTAAREAQAALDIVPAQGWG--VA-LGLPLGC
LILAHVRMGRLDVAAKYV-AQG--FPCTMLQSRYGLH--YLYARGHY-RLASGHAQSALA
DFLACGELMDCWEIYGT-G------PVSWRTSAAEAWIKLGNQDQAKHLVRDQLSR-LPP
GSARVRGRSLRLLA-AASSTPQRPQLLEEAVDLLHDCGDKFELALALIDLSHASQKA-GD
LRGARRLARRAWHAAKAI-G---AEALCARVA----------------------------
---------------PEYR-------------------------EKYPVSARKKSPKALS
ALSKQERRVAELASEGYTNQEIADQLFITKSTVEQHLTRVFRKLNVQRRQELSQSA----
----------------------------
>NC_009380.1|c9|3108746-3111577|-|YP_001159581.1|regulatory_protein,_LuxR
------------------------------------------------------------
------------------MGFVERSR--------ELDILRDLYAVCAT-------G-RGR
VALISGPGATGKTELLRAVADHVDTA----------------------------------
----------GGLVLSAACSRAERMLPAAAMGQLFNSV-PLPTEVMRRIGAFIDLGAATT
EGDADIR---------------------------------------------------AV
HVMCVELLD-----IA--R-ERPLVL-----------------------LVDDVEFADET
TLRTLLYLQR-RLTAAQILV--VLA--------ESP-QPQPFNPEF---RAELTRQACF-
CNI--QLSPLSEAGVAE-VL----------RGWTDDETALV---LAPAYHRISGGNPLLL
HALGEDR-----RAA------------------GPTDATEAIV------GDQ------FR
QAVLACLRRWD-PAILE----TAHGLALL------DDF-ATPTL----LARLLDSRPARV
QWVLNALTMSGLL---------DSG-RF--RHPAARAAVL---HDLDPDALSKMHARAAE
LLHSE-GAPAPAIGGHLLAA--GG------LAEPWAIALLQDAATHALAED-RVDD----
-----AVESLKLAHEMCHD------APRRA------------------------------
---------------ALTAMLADCQWRVSPAAVSQH-LQSQRNALRAG--HLSERHAAGL
L-RYQLWHG--HLE----DAQETLRHLREARHQLDAT------TAAEVDGCADWLRLYFP
------------------------------------------------------VAFAGR
GAAPGATPALTLARTDGSFGWVTPSLTAVLTE-------------------------GVT
DEVIARAEQALGSHM-----LVDVG---PESALCALQTLVYAGRTDQAVHWCDVLGAE-A
GSR-GANTWHAILS-DVRSHIALRQGDLPLGERFAHEALDAMSPHNWG--VA-IGSPLSN
MLLAKIGMDKLDEAKALL-RYV--IPDAMRDTWFWPL--YLRARGHL-HLAGGRVHAALA
DFETCGQLATEWGMDLP-T------LLPWRGDLAQVYLRSGRPDMARKIVTEQLSR-PDA
QNARTRGISLRLLG-SALDVKQRVNTLRQAANLLQESGDRFQLALALTALSRAHYGR-GE
FNTSRVVARSATQLAKDI-Q---AQALCRRLL----------------------------
---------------PSGEA------------------------AGDDEADAPPEHEEMS
RLSDAEQRVATLAALGHTNREIGKKLYITVSTVEQHLTRVYRKLNVRRRTELSLGLPMDS
AGAGLLAVAPSSAERPWPQWDSAAIQAS
>GU385216.1|c1|48917-51730|+|ADC79646.1|TamH
------------------------------------------------------------
------------------MSIVGRDI--------QLTQLHDLLTARDR-------G-AGP
IALVSGPVGIGKTALLHEFTQSAAKS----------------------------------
----------GSLVLRAACSPRERANSWGVVHQLLWRTGRFKGASQRTSDTLAAVGRSLA
AVTRAPE----------------------------------------------GERDKAM
DEFCAAVME-----LA--D-DHPLVL-----------------------AVDDIHEADPE
SLGCLGHLAR-RMVASRVLA--VFT--------DRP-QALPPYAAA---RAEFARQPGF-
HQL--RVGPLTVGDIRL-LL----------TERLGVPVDEA---GAAEFHAASGGSPLLT
RALVEDT-----CNA----------------LQGTYTSAAALR------PVAGEM---FD
SAVVDCVHRVS-APAAD----LARHLAVL------GPD-ALSVL----LDRDSTNPP---
TRHLQELTQAGLL---------AGP-DF--RHPRMHTVLG---GEVSAEERARLHGRAAV
LLHDN-GAHPATVAEHIVAA--GG------IAESWAPPLLREAAIEALAQD-EFPK----
-----AMRLFDLAHAICPD------GPLRA------------------------------
---------------SILFQHTLSAWQVDPAKAMRR-LPELKEALQAGH-LTALSGAMSL
I-KNLVWHG--YVD----EAAEMLQLVDRQLADEPDEQ-----GLAEARALQQWLSVLCP
PFH---------------------------------------------------RRMFGE
VTPDITEELTPAAIAAQPRLQAAAALSVVLRG-------------------------GEA
EEAVVGAAHVLEMSS-----LTPT----LETIPLALMTLFYADRTEQVDAWCTTLLDA-A
RER-----NIALLS-SLRAANLIRQGRLLEAETHSDLALSRMSSQGWG--LS-IALPLAS
SVYALTAMGRYDEARARL-CRP--VPKAVFQTVFGQH--YLYSRGQF-HLATGRLQAALG
DLLACGKALESWGVGDT-T------LIPWRTGVAEARLRLGEPDQAVTYLQEELAR--HK
SSPRVHGNALRLLA-STMKPRQRLQALQEAVDELQASGSDWLLAHALGDLGRVYHLL-GQ
SNRARVIVRRAYRMAKKC-H---AEPLSQNLL----------------------------
---------------PDAERAAE---------------------GRRCAAGHEVSEQVHD
VLSEAELRVAALAAEGHTNREIARRLFITVSTVEQHMTRVLRKLNLSRRDELPQGLDTMG
GSAAPAVSAARG----------------
>NZ_ADDL01000026.1|c1|20022-23045|+|ZP_06237515.1|transcriptional_regulator,_LuxR_family
---------------------------------MTTAPASRNPARSPWRPAEEPRGRGRS
AAGPCAGARLAPPRTSHVPARDRRLTGDLPDRGEALARLLAAFADSQA-------G-RGS
VVVISGGPGSGRSTVLAALLERAGGT----------------------------------
----------GATVLTACGSAAAVGPPGDALRQLSRDA-----TRAAALARAGKDATGRP
VVAGLAE---------------------------------------------APPLPALV
EALGARIRA-----LA--A-AAPVVV-----------------------AVDDVHRADEA
SLRGLSLLVS-RLATDRVLLVATVL--------DGA-VTEPSRAGW---HTDLLRHPRY-
RQV--WLPGLSPAGVAT-VL----------TRRLGPAAAAA----APGWWAFSAGNPTLL
RALLDDA-----RAA--------------PSPTGAPEANGAAV------GPEPGPR--YV
EAVARLVHAAG-GEALA----VARAVAVL------GASGASAGLAHQVLADRAGAGADRR
EAALGALARAGLM---------DRD-GF--RHPAVRAAVL---ADIPASARRELHRRAAE
VRYLA-GASADEIAVHLVAA--GW------AGERWCLDVLRRAIESALRAD-DVAG----
-----ALAALDLADVTTTASREADADDQRA------------------------------
---------------EFTLLRLRVACRDDGAEVIDR-LDPLLRALLAG--RLGGAHAVTL
A-RLLMWFG--REA----DAERALAELERRRDRLDPR------SALGLELIHDYLPVNHP
RL-------------------------------------------------------AVA
SGSARMTRRTAAGVADGQTAAAVDALRLALRG-------------------------EAD
DETVRSAQQVLQATL-----LDDQS---VGSVEWAVLALAYAGQLELAVSWADRYLAE-A
TRR-GSRAWQALMA-GVRAEIAVHQGDIRAAGENARLALTVVPAWSWG--VG-IGRPLSA
LLMAAAASGAPLDDADVPA-----VPEAMFRSRFGPQ--FLRGRASL-HAARGRLPAALD
DLMTAGRLLVEWNIDQP-G------FVPWRVDAAHVLVRLGRVDEARALAEQHLAR---T
HGGRLRGIGLRALA-ATLEPPRRLPVLLAAVDLLGAHSDRLELAGALADLSEAYLVA-DR
SARARAVARRAMLLAGEL-G---AEPLRSRLA----------------------------
---------------GAYDWEDGSVPPRSGPEAGRGPETTPDLTPPRDPGATPSTRAGLA
ALSPAEHRVATLAASGRTNREIAASLFVTVGTVEQHLTRVYRKLGVRGRADLRARASA--
----------------------------
>NZ_ADDL01000026.1|c1|17020-19884|+|ZP_06237514.1|transcriptional_regulator,_LuxR_family
----------------------------------------------------------MR
EIRTVRAPRSSGPRTGEAAALIERVG--------PIAELDRMLAACFA-------Y-QGG
AAFVSGAVGCGKTELLNAFLGRAGQA----------------------------------
----------GATVLTASASAQDSA-PGSVLRALAAGL-------GEQVTGPAEPAWNRP
DPGRSAP--------------------------------------------------ETP
RELGERLLA-----AA--L-RRPLVI-----------------------GVDDVQHADEI
SLRGLLQLGA-RARSSRLLM--VVT--------GPE-APPGAPSRIARWRADLTRATST-
VEV--PVAPLTRMGILE-AL----------TRQLGFGPARA---LSACFARLSGGNPLLV
RALAEDYLVEDLRLA--------------GPHGGDPDVQDGAADPSAPRSFDPPGHGAFG
RAVLTCLHRAD-DRLLA----TARGAAVL------ETA-GSPAL----FAGLLEIGLTET
GAALDTLASAGVM---------VGG-GF--RHPVARAAVL---ADLPLDEAVVLHRRAAR
LLRRS-GAAPRQVAAHLVAA--GE------ADESWSVDLLRRAATDSADDD--VAF----
-----AVECLRLAERASAD------GRERL------------------------------
---------------SILIQQSRVECRVNPGGAIRR-LPRLTRAIEAG--EVSDRDLVPL
V-RALAWHG--RVD----EAAAALRRLDRDDVDLDER------GHTELAVARNWLRYSHP
------------------------------------------------------GLLVAA
GTVRAGHGPRPADPHPTRAAQAVVLLGTVLAA-------------------------GPD
EATVPVADALLREIP-----PADET---ICPLESALVSLVCADRADLAAAHCDRLIGE-A
DRR-GFPTWRGLLA-GPRAEIALRQGDLAAAERFARSALDLIPAWSWG--VG-IGLPLSV
LLRVGARTGTDPAGARAI---P--VPDEMFQTRYGLS--YLYARGQR-HAAVGQPHAALD
DLLTCGRLMVRWGLDLP-A------FLPWRLDAAAVLTELGRLAQARDLLTENRGR-PSA
TSPRVRGLALRVEA-SLVERQRRSGLLRESVRLLGVAGDRLELARAREDLDALDRAA-GS
PRRGSTGRPGLAAPPVGAAREPGSARLSWPAP----------------------------
--------------EPAAPTG-----------------------PAFVLTVEGDSQAGGG
ELSTAELQVASLAATGHSNREIARRLYITVSTVEQHLTRTYRKLRIRGRAELPVFLGV--
----------------------------
>DQ914285.1|c1|18563-21346|-|ABI93788.1|GdmRII
------------------------------------------------------------
-----------MPFSYAMPVNTERNSHPMDTVLNAAAHLGHAFGDSLV-------R-PGQ
ALLLDGPLACGKTTLLRSFAERAAAA----------------------------------
----------GRLVITATCSPCERDLPFGVVSQLARGA-RKSAGGPPEVPGLPDILRGTS
DPVDRAE------------------------------------------------IARLC
HRLCTLLID-----YA--E-HTPLLL-----------------------AVDDVRHSDPA
SAHFLLQLVR-RLDSARIAA--VFT--------DDL-SLPAPTLPL---RYELLRSQRL-
HRI--GLGPLTPDEVAD-VV----------VAELGETASPR----AGDVYAATGGNRLLL
HTLLADY-----------------------REHGEARQTG------------------YG
QSFLSCLHRNE-PIFLD----VVRALAVV------GFS-LPATD----LAWLTGHEPEPI
GQVLAALTGAGLM---------DEG-AF--RQEAARLSVL---NDTPALTRRTLHQRAAR
LLHDQ-GRPATTIARHLVRA--GR------IPDSWSPELLLEVAEQVAVGE-EASV----
-----AVDLLEQSLEQCPH------QERRA------------------------------
---------------ALQAKLAEAEWKINPSTATRH-HTPLYGAVRAG--RLGLPDSVTL
L-MQLLWKG--GLT----EVEGLLAHLREDPAATDQLHA----IEAALTCTYPWL-----
----------------------------------------------------------AE
RRPAPAHHGGSAATRAAVWPRAGTVLADVLTG-------------------------GQT
HDTVRRAEEVLRELQ-----LGHDPACQEQAGLFALLALVYGGRIDLASAWCEGALGE-T
GAGPHVPMRQAVLA-AARSEIALRRGDLAEAAERSRAALTHASPGAWG--VA-VGLPLGS
LILACTRMGRHEEAGFHV-AQT--VPNAMFKSSYGLH--YLYARGHY-FLAAGRHQAALA
DFLLCGELLTDWGLSSGCD------PVPWRIGAAEAWLAQGNHDQARILVYQQLSR-PHT
DGARARGQSLRLLA-ATSSAKRRPQLLNEAVGLFTEQEDKYELARTLWDLSQAYHAL-GE
KKQARRTMRRAWHVAKMC-D---AASLYEEWL----------------------------
---------------PADD-------------------------QSQAVAPAPKADAGIE
RLTHSERRVASLAAMGYTNREIAGKLYVTASTVEQHLTRVFRKLDIKHREQLPTELYADR
MELA------------------------
>AY947889.1|c1|77137-79917|-|AAY28234.1|HbmRII
------------------------------------------------------------
-----------MPYSYAMPVNTERNSRPLGGVLNTAVHLGHPFGDSLV-------R-PGE
ALLVDGPLACGKTTLLRSFAERASES----------------------------------
----------GYLTITATCSPSERDLPFGVVSQLARGA-WKSPGGPPEVPGLPDILRGAG
DPVDRAG------------------------------------------------IARLC
HRLCTSLID-----HA--E-HTPLLL-----------------------AVDDVRHSDPA
SAAFLLQLVR-RLDSARIAA--VFT--------DDL-SLSSSLPL----RYELLRAQHL-
RRI--GLGPLSPGQVAE-VV----------VAELGETARRH----VGDILAATGGNRLLL
HTLLSDY-----------------------REYGEARQTG------------------YG
QSFLSCLHRNE-PIFLD----VVRALAVV------GSA-LPAAD----LAWLTGHEPEPI
SQVLAALTGAGLM---------DEG-AF--RQETARLSVL---NDMPAQARRTLHQRAAR
LLHDQ-GRPAATIARHLVRA--GQ------IPDSWSAEVLLEVAEQVAVGE-EASI----
-----AVDLLEQSFEQCPH------EERRA------------------------------
---------------ALRAKLAEAEWKINPSTATRH-HAPLYGAVRAG--RLGLPDSVTL
L-MQLLWKG--GLS----EVEGLLAHLRADPAATDQLHA----IEAALTCTYPWL-----
----------------------------------------------------------AE
RRAAPPHHGGAAATRAAAWPRAGTVLADVLTG-------------------------GQT
HDTVRRAEEVLRELQ-----LGHDPACHEQAGLFALLALVYGGRNDLASAWCEGALGE-T
GGGPHVPMRQAVLS-AARSEIALRRGDLAEAAEQSRAALTHASPGAWG--VA-IGLPLGA
LILACTRMGRHEEAGFHV-AQT--VPNAMFKSSYGLH--YLYARGHY-FLAAGRHQAALA
DFLLCGELLTDWGLSSGCD------PVPWRIGAAEAWLAQGNHDQARILVYQQLSR-PHT
DGARARGQSLRLLA-ATSSAKRRPQLLNEAVGLFTEQEDKYELARTLWDLSQAYHAL-GE
KKQARRTMRRAWHVAKMC-D---AASLYEEWL----------------------------
---------------PADD-------------------------QGHATGPTPKSDTAIE
RLTHSERRVASLAAMGYTNREIAGKLYVTASTVEQHLTRVFRKLDIKHREQLPTELYADR
MELA------------------------
>AY179507.1|c1|59503-62283|-|AAO06927.1|GdmRII
------------------------------------------------------------
-----------MPYSYAMPLNTESNSRPMGGVLHTAAYLGHPFGDSLV-------R-PGQ
ALLVDGPLACGKTTLLRSFAERASEA----------------------------------
----------GYLTVTATCSPSERDLPFGVVSQLARGA-WKSPGGLPEVPGLPDILRAAG
DPLDQAG------------------------------------------------IARLC
HRLCTSLID-----HA--E-HTPLLV-----------------------AVDDVRHSDAA
SAHFLLQLVR-RLDSARIAA--VFT--------DDL-SLPSSLPL----RYELLRAQHL-
RRI--GLGPLSPGQVAE-VV----------VAELGETARRH----VGDICAATGGNRLLL
HTLLSDY-----------------------REHGEASQAG------------------YG
QSFLSCLHRNE-PIFLD----VVRALAVV------GSA-LPAAD----LAWMTGHEPEPI
SQVLAALTGAGLM---------DEG-EF--RQEAARLSVL---NDMPAQARRTLHQRAAR
LLHDQ-GRPATAIARHLVRA--GQ------IPDSWSAEVLLEVAEQVAVGE-EASI----
-----AVDLLEQSFEQCPH------EERRA------------------------------
---------------ALQAKLAGAEWKINPSTATRH-HAPLYAAVRAG--RLGLPDSVTL
L-MQLLWKG--GLS----EVEGLLAHLREDPAATDQLHA----IEAALTCTYPWL-----
----------------------------------------------------------AE
RRAAPAHHGGSAATRAAVWPRAGTVLADVLTG-------------------------GQT
HDTVRRAEEVLRELQ-----LGHDPACHEQAGLFALLALVYGGRNDLASAWCEGALGE-T
GGGPHVPMRQAVLS-AARSEIALRRGDLAEAAEQSRAALTHASPGAWG--VA-IGLPLGA
LILACTRMGRHEEAGFHV-AQT--VPNAMFKSSYGLH--YLYARGHY-FLAAGRHQAALA
DFLLCGELLTDWGLSSGCD------PVPWRIGAAEAWLAQGNHDQARILVYQQLSR-PHT
DGARARGQSLRLLA-ATSSAKRRPQLLNEAVGLFTEQEDKYELARTLWDLSQAYHAL-GE
KKQARRTMRRAWHVAKMC-D---AASLYEEWL----------------------------
---------------PADD-------------------------QHHATAPTPKSDTAIE
RLTHSERRVASLAAMGYTNREIAGKLYVTASTVEQHLTRVFRKLDIKHREQLPTELYVDR
PELA------------------------
>NC_003155.4|c5|1132045-1134894|+|NP_822110.1|LuxR_family_transcriptional_regulator
------------------------------------------------------------
-----------MQGVSCLHPPRKPEELTLVDRETQFRALRLALTECAA-------G-TVK
LLVAEGGMGCGKSTFLGEALHTAAAS----------------------------------
----------GFAVLRAAGLPADHRQPLGVLQQLLNDP---------------APEDTAR
TAVRPMP----------------------------------------------------V
QHVRGALER-----LA--A-GAPLAI-----------------------GIDDVQDADPE
SLHCLMRLTR-HSPTSRILL--LCT--------ALA-CSPAADPVL---EAELMRQTAF-
ERI--TLDCLSLDGVTG-LV----------SDRCARPTAPP---PADYCLTVTGGNPLLL
RALLEEHSEADAPSA------------PRPAEPSALHSPPQAA------PPRPVVGGRFY
QSVLACLSRTE-TAIRQ----TAGALAVL------GGR-ARADL----LPQLLGASPASV
TRGLRALEATGLT---------TSG-RF--RHPVAEAAAL---DALDPSRRAHLHRRAAA
LQHHD-GAAPRDVARHLLAA--RH------AAGPWAVSVLRDAAEQSLAQD-DVAS----
-----AVSCLELAYGACVR------ERERP------------------------------
---------------EIRIRLAAAFGRTNIAVAEEH-LADLVATLREG--ELTGHQTALL
V-PLLVNHG--RLG----EAREAMDRLNAADDARGLC------ADGGFPMAAPWPSTAHL
AARRDPAARRDPGTR---------------------------------------RDPADK
PFLPRQSGAPQPRPEDGRGQQPTAALWALPGN-------------------------GTS
EAAAHAAEQVLRSSP-----LTDST---LVLLVNAVRILARTGRYDTADIWCHRLLGE-A
TRR-RCPGWQAHLL-AVRAELSLCRGLLADAKECAQRALTHVPGHSRS--VF-AGGPLAC
QVLACTAMGRYDEATQLL-SHP--VPEALFHSVYGLG--YLRARGHF-HLAMNRLPAAVR
DFLTAGRVAREWGLDHP-V------LLPWRTDAAEAFLRLGETKRADQLLTEQLVS-PHS
GNPYVRGTALRLRA-QTAAPAERLRLLSEAVSDLQSSGDRLALARALADLGAAYHSR-NE
PVRASATVRRAWQLAKEC-G---AQALCDSIL----------------------------
---------------PSR--------------------------GTKDRGPDGRAAATEA
LLSESEMRVATLAAGGNTNREIAGRLCVTVSTVEQHLTRVYRKLNITRRRELPTRLRHLA
DQAN------------------------
>NC_003155.4|c16|3630367-3633162|-|NP_824078.1|LuxR_family_transcriptional_regulator
------------------------------------------------------------
-------------------MLIGRGQ--------EIDRLRAAYSSVRS-------TGRSR
AVLVESAAGCGKSEILEDLVRHVESL----------------------------------
----------GLIALRATAIAEERNTPLSVLRSLVNGA-PFPDDLVRRFHTMSDAAARMI
STEGRDK------------------------------------------ARRDAAWYELM
RTFCTEVRA-----LA--Q-RAPLVV-----------------------AVDDIHHGDAD
SLRQLLHLAR-HCRNVPVLL--TFT--------QSL-AGGPADRTF---GAELLRQPNL-
EHI--RLPRFCRQDIAD-ML----------AEQGRADAGQG---TVERYFAVSGGNPLLL
RALLEDA-------------------------RLEPDDTVDAQ------DVGPRAGQAYG
RAVLACLDRGG-EKAHE----VAAGLAVL------GGA-FTHEL----LSRLLDISAAAL
TENLRALRAAGIV---------VGT-SF--QHPAAKAAVL---DSLEPSHRLRLHQRSAA
LLHAS-GAPAALAAEHLHEA--GQ------ADGAWAVGVLQQAAEQALLAD-EARR----
-----AVSYLELAHAASAD------PRGRT------------------------------
---------------EIKIRLGSVTRRVSAADAERH-VDDALRGFGAG--LLTPSDTGGL
A-ALLLAHG--RLE----QARSVLEQGRRPGDGDADR------TAARRQLAEIRDSVLNR
G-----------------------------------------------------AWCAGT
R--AAWHENPAGRPSTGRAGTGLRAWLSGSHA-------------------------ALL
AQRIAGTEGLLEITH-----LTDAT---FDLVLNAVWTLLALGAVERALHWCDTFLRE-A
KRR-DAPGWEAVFA-AVRAEGALRGGNLAEAERDARRCFAVLPERHRS--AL-EGSAVSY
LVTVQIARGKYEDAARQL-SRP--MADSLPDTIHWLD--YLRARGLY-YMATRQYHSALR
DFHEVGRLAERWGTDWP-A------LLPWRTDTAEALLRLGEREQGLRLATEQLAM-VQD
GAPRIKGISLRLQG-LASEPAARLGLLNRAVVELSRADDRLELSRTLFDLADAHRET-RQ
TRQAAMVLRRARQLAKSC-G---AQPPRDRIG----------------------------
--------------SPDAAGA-----------------------SGELFGEGPERNADWG
HLSESERRVAGLAASGYTNREISVRLYITMSTVEQHLTRVYRKLKINGREELLAEARAGV
QV--------------------------
>AB435553.1|c1|70017-72725|-|BAH02275.1|transcriptional_regulator
------------------------------------------------------------
------------------MHLFGRDS--------ELDLLKSLLVECEI-------G-KAV
TVVLEGGAYCGKSELLVNFGEHVKAS----------------------------------
----------GAVVVNA------RDLGFDNVPRMSSMS----------------------
-SAQTAE----------------------------------------------------F
VEFCGRLEA-----LA--D-RSPVVV-----------------------CLDDLQDLDSL
SWRWLLEATRARLRSSRLML--IVV--------QAL--RTSLGPEF---HCELLRQPNL-
HRI--ALRPMTRDHVVD-LV----------GALEGRPAEDT---FLDDVFRLSGGNPLLV
RALLEEH-----RVR---------------NAAGQTAPWPAAD------GL-------FA
QAAVNCVQGND-PAVVS----LATGIAVL------GED-SRPEL----LEELLGLNAAEI
ARGILALASAGLV---------DGY-RF--QHPLVERATL---NIIGPKQRAELRHRAAE
LLSRH-GVGSRTIARHLLEA--GS------ATEPWHVGALRHAAEEALDSD-DAEQ----
-----AGAYLELAHDASTD------SWERG------------------------------
---------------HIRLKRALVRWRVDPCSVERHHLDGYCGERAPGP-ELCPVDAVLL
I-QLLVSLG--RVE----EAGELLREVRPTLRGLRS-------TTDLTVVGNTWLWFFPP
MTGMPA------------------------------------------------AWCAGS
RALADGLSGKDCADGTSRSDALGALATWIKEL-------------------------GRK
PGDIQDSEKLLRTTP-----LSDMT---LSLILTELNSLTRVGRLDLAATWCDVFLKN-A
TVR-GIPGWQRLFA-AVRADIALRQGKLTEAETFAWMSLDGLAEPSST--WL-HGGPLTV
LMTVYTEMGRYKDVAHLL-DRP--VPEALFRSVYGLP--YLRARGHY-ALAVNRPHLALS
DFLSIGRLAERWGLAPS-A------ELPWQVDSAHAWLRLNDREQAERMLAEYDSA-TAG
IGAATDGAVLRVRA-MFAEPGERTRLLIQAAERLQETGDRLQLAKVLADLASTYEEL-GV
GRRADAIRHMARQIAGDCSAEVPSEPIGSSHR----------------------------
---------------PSPE-------------------------GGMSSALEFRGADVGA
NLSESERRVAALAAKGLTNREISAKLFITMSTVEQHLTRVYRKLDITRREELPLELQLAL
PQTA------------------------
>NC_009921.1|c15|5772147-5775131|-|YP_001509105.1|LuxR_family_transcriptional_regulator
------------------------------------------------------------
------------------MALVERDD--------ILRQLDLLLAECTA-------G-SGR
VVLIDGPVGTGKTELVRYCGTRAAGS----------------------------------
----------GVTVRAATCARAEHVLPLGVVGQLLRGLPAGDGETGAGTVCTGPDGAADP
DTARGTDTLCEEATQDGCRGREARADGAGRAARIAELLDVGAAIAGRLGPDPDRELAQIH
QELTLLILD-----LS--K-RGPVLL-----------------------CIDDVQYADVP
SLHFLLHLVR-RLGSARIAV--LLA--------GDL-ASHPLDLPF---RAELVRAPEF-
RSL--RVGPLSPAGSRD-LL----------AAATPVTPNPS----ATDPYQVTGGNPLLL
TALVQDD-------------------------RGFGQPGPEV----------------FG
LALLSCLHRGE-PVAVQ----VARALAVLETPVPDGVVAPDTAT----LAGMIGADVPAA
ARALDAMNAAGLL---------DDG-RF--RHKVARDAVL---GDLTASERTDLHRRAAR
LRHQQ-GAPAATVAAHLVEG--ND------VQPPWGTGVLVEAAEQALLDG-RPER----
-----AAACLRLAARSAAG------ERERA------------------------------
---------------AIRARLAHAEWQTSPAAAARH-LSPLVSAAHAG--LLEQRTNAAL
V-RQLLWHG--RSA----EAEDLLARMRAVAQAEPED------DAAEVHDLEVWLATVHP
PL-------------------------------------------------------ARR
RRGPAAGSAVPAAPAADSWLRSAALLADAVAAGGHRTGREPGPSGITGAGVAGTGPVGSG
LVGADRAESALRDLH-----LARADPWAGEVALLALLLLTRAPRMDAAVAWCERVLAD-P
DL--EDQTARAMAT-AVRGTLALEQGDLAVAADHARAALRRLPAKAWG--VA-IGLPLGT
LVLAATRTGDLEEAARQL-VQT--VPEEMVASRYGLD--YLHARGHY-HLAANHAHAALA
DFLACGDLIRGWGLDAA-A------LVPWRIGAAEAWLRLGNVDQARQLAQEQLSR---P
GATRVRGLSLRLLA-AASPPGRRLQPLTEALELLEATGDRLGQAYVLADLSRVHDHL-DQ
RRRARLLLRRALHIATMC-G---ARPLAQELL----------------------------
---------------AISG-------------------------DGRAVFGLGADQEMIT
GLTDSERRVASLAVMGYTNREIALRLYVTPSTVEQHLTRVYRKLNVKRRQDLPADLWTDA
THTG------------------------
>AB363939.1|c1|1013-3781|-|BAF85834.1|transcriptional_regulatory_protein
------------------------------------------------------------
-----------MRGVSPSVSVREPQGLTFLGLGRQSHAVRTALEACAA-------G-RVR
VLVVEGGLGCGKSAFLGEALKHAAAS----------------------------------
----------GFLVLRSAGSPPEGRRPFDLLRQLAVDP----DIPDAQRSLLQDAVGTET
PAAQRVR-----------------------------------------------------
----AALHQ-----LT--G-AAPVVI-----------------------GIDDLHHADPQ
SLHCLLQAVD-HPRATRLLL--VCT--------ALP-SGLAADPAV---EAELLCQPAL-
QRV--MLGRLSLRAVSG-LR----------AARPGPAVEAL---PADDLLAVTGGNPLLV
HALLEEL-----VES---------------HTQGHTDERAGRR----RRAASPVIGGRFY
QAVLASLSRTD-SLVRH----SAGALAVL------GDS-GCAEV----IARLLGIGRAMA
ARGLRALEATGLT---------ASG-RF--RHPVVEAAAL---DTLDHDHRAHLHRRAAA
LLYDV-GAEPDEVARHLLAA--RH------AAGPWAMSVLRDAAEQLLMRD-DVLT----
-----AVSCLELARRSCAG------GPRRA------------------------------
---------------EILLRLTVATRRTDPAAAEDH-LAELVTELRAG--RLTSAETERL
G-HLLLGCG--RLE----EATEVMGRPGPHGDPRTPR------LETGFHASALW------
-----------------------------------------------------------E
PLIRPRTDPEPGDEESPRPRMPVTGIWDLPGD-------------------------GTN
ASASDAAEHVLRSLP-----LTDTT---LVIVVNAVRVLCRTGSYETAALWCTRLLGE-A
AGR-RLPGWKAQFL-ALQAEIALCRGLLADTEEYARQALACVPRCSRS--VF-IGGPLAS
RVFAATAMGRYDEATRQL-DHP--VPEALFRSVYGPA--YLRARGHY-YLALDRPLAAVR
DFLGAGRLLRRWGIDRP-T------LMPWRSDAAEAFLRLCEPRRADRLLREQLAR-TPD
DDPHVRGVSLRLRA-QIAEPPDRLNLLTEAVNHLKSSGDRLALAGALADLGAAYRER-GE
STRAGATIRRAWHLANDC-G---ARALCERIL----------------------------
---------------PG---------------------------GPGRQSFGDGTGRTEA
ALSGSELRVVELAANGHTNREIAARLCITVSTVEQHLTRAYRKLEISRRQELPARLCAHI
ESPV------------------------
>NC_013093.1|c3|3090196-3092991|+|YP_003100477.1|transcriptional_regulator,_LuxR_family
------------------------------------------------------------
------------------MSLVESEH--------LLDRALALLAESAR-------G-RGQ
VVHISGPGASGKTTLLRAFADRAPD-----------------------------------
----------DPLLLSATCSRAERTLRGGVLAQLAAGL---PDGQSERSLRLDLDQPDGP
SAQDSPQ---------------------------------------------------AI
REACEQLLE-----IA--R-RRPVAI-----------------------TVDDVEHADLL
SLQALLYLLR-RIDTARMIV--VLT--------ESD-HSRRVNALF---RAELTRMSRF-
TGM--RLSPLSPRGVAQ-VI----------TRELDPATAAT--ASALTVHAVSGGNPLLV
KALLQDH-----RAA---------------SLGGAEHTADDAV------VIGEA----FR
RAVLACLHRWD-PELLE----VVRAVAVL------GEN-ATPEL----LCRFPELTTA-A
TEAVTSLNSSGLL---------DDG-RF--RHPAVRAAVL---GDIGADELTELHQRAAE
LLYVE-GLPSGDIATHLVAA--GA------ATAPWSVSVLRDAADSALVEQ-RLDH----
-----AADCLKLARAACPADD----EPGQA------------------------------
---------------ALLAALAAVQWRTTPSVVARH-LPALAEAAERG--HLDPRDTGAL
L-RYQLWHG--RRA----EAGTTLRRMEEAAARPGSP------VLAEHRVLRDWVRWQHP
T-----------------------------------------------------VAAAAR
PATGDRRSALAR---------------------------------------------DHQ
EDLLAAAEWVLRNRW-----MPDSA---PELVVHALMTLAACGALARAKHWHDALREE-L
GTG-QNTTWKATLA-DARAHIALLEGDLAGAERQARLALATLSPRNWG--QA-IASPLAA
LVLATSTAGKHDEAESQL-KRS--VPVTVRDTWHWAV--YLRARGHA-HLAAGRPHAALA
DFEECGELAVHWDLDLP-A------LLPWRSDVVLAQFALGRGDRAAELVLAQLDR-PTA
DLPRVRGASLRALS-RSAELKQRLPMLRESVALLQGCGDQVELSLALAALGSTHHAL-GE
FGAAEVVAKRAVRTAEAC-G---AGALCRAAL----------------------------
---------------PAGLVLDGTPTTPET--------------ETTAETAPAAEPDDLA
TLSTAERRVAALAAMGHTNREIGRKLYITISTVEQHLTRVYRKLKVRRRADLPTGLPLEA
LSAWGAETAVGAARPGASHRA-------
>NZ_DS570426.1|c1|37758-40625|-|ZP_05000942.1|transcriptional_regulator
------------------------------------------------------------
--------------------MVERDK--------QWETLDDLLGSARR-------G-RGR
VAVISGPIAGGKTTLLEHFTEHAMSE----------------------------------
----------GVLVLEAAGSRAERYLPFGILRRVLDSAGPLEPAVHAEATALLDGVAAQI
ADAEDAT-------------------------------GG------------VEAGMRVL
PHICASLLR-----IA--R-DRTLVI-----------------------AVDDVHHGDEL
SRAFLLCLAR-RVRQAGVLI--VLT--------EAV-RLLPAQLAF---HAELQRQPHC-
TTI--RLPLLSADGTGR-VL----------AGHFSTAAAQR---VSAGCQETTGGNPLLV
KALLEDG----------------------LTVLGDSEPFQPLA------PAEA-----FE
RAVLDCLHRGD-PETLA----IARGIAVL------GDT-CPPLV----LSRITDVHVKTA
ELAVQDLNRCGIL---------RGG-AF--REAATRAAVL---AATPTGALSLLHQRAAR
LLHQE-GAPALDIARHLLAA--RK------PVTDWAIPVLQEASEYALVEG-DPQL----
-----ALRCGELAVDSCPE------GPRRT------------------------------
---------------ALKSRLVSIVWRSSPVAAESH-LRQLSREFCAG--RLTDRDLLHA
V-TCLAWIG--EAR----QAGEEIRRLQSAAEEARDAGRPFAYRPATLAAAQSWLSVVSP
PVREAFATTGAPY-----------------------------------------ADRPGA
PRPPAPAGAAPYDMPDDAHIPAVEAMRTALRG-------------------------GQG
EAAVAEATRVLQRYH-----LSDRT---LTPLVLAVLALVYAGRLDLALTWIDRLLGE-C
SAR-NAPTWQAALG-VVRAEVALRQGDLPGAAAQARQAMSLISAQCWG--VA-IALPLAI
LIEAETQMGNLDEAMSLL-EQP--VPDTMLETQVGLH--YLRARGRC-HLATGRYHAAVR
DFLTCGELMQAWGMDAV-E------LAPWRLDAAEAWLAIGNVSRARQYVEQQKQREPGP
PGSRARGALLLALARTSGDLAYRVKRLTESVEALEQGEDRLQLAVALGELGSAHRAA-GD
FNRARMLVRKAWHVAKSC-G---GAAAVPAVH----------------------------
---------------PPDRATARPS-------------------PPRPGREAKPAAGEAE
ALSEAEARVALLAARGHTNREIATKLYVTVSTVEQHLTRIYRKLKVKRRRDLPARLWDLS
LPGTA-----------------------
>EU827593.1|c1|14925-17909|+|ACF35442.1|MbcRII
MARRTTWLPGVDDDASSPTAREGGRGSPRRGTRTTPPPEQRAHARFRRAPGPPHPPERRH
RPGPVPADRVAFRTTTPRTTERTTPPVELLRAPEIQSAVEHLAVDLPD-------R-AGR
AFLVDGPPACGKTTALRRLVDRIAHE----------------------------------
----------DHLVLTATCTPPETELPFGVLKQLLASP-GMARVDPRLVADLGELLAPAP
PPADDSA------------------------------------------------LLQLY
HSLCAALIA-----LS--E-EVPLVI-----------------------AVDDVRHGDTA
SLHVLLQLVH-RLDTARVRL--LLT--------DDL-LLPVSFPPL---RYELLRLRGL-
GLV--RVAPLPAARVRE-EA----------VRAVGADVAKR-----VDFAALTGGNPLLL
HALAVDV-----------------------LEAGEPREIG------------------YG
NSFLSCLHRNE-PLFLD----TVRALAVL------GGG-SASD-----LGRLSGHEPEQV
AQVLNALRESGLL---------AED-GF--RHDAARRAVV---ADTPVAEHEVLHRRAAR
LLRDQ-GGAVTDIADHLLRA--GR------ITDPWAADLLVDAAELVVQRG-EPTA----
-----AVALLQRALDCSPD------RERRT------------------------------
---------------AVQARLATAEWLVNPSTSARH-HTALLAAFHAG--RLSVRDSATL
M-KHLRWAG--NTA----DSDAVLARLRTDPR-----------AAEDVPVLEHWLTSTYP
G--------------------------------------------------------AAR
PRTVLGRDVDSARSRADLVPRANAVLLDVLVA-------------------------GDS
DDVADRAEAVLRELR-----LARESGCYGGAAVLALSALLYSDRADVAASWCEQLLSA-R
AVP-LLPMPRAQVL-ALAAESALRRGDHPSADELAREALTVVSPTAWG--VS-VGLPLST
RVLALTRMGRYDEAAAVV-AQP--VPNGMFGHRNSVD--YLYARGHF-FLARERPRAALG
DFLLCGEQLTRWGLGSGCA------PVPWRTAAAEAWLAQGNRDQARVLIHEQLGR-PGT
DSRRARGQALRLLA-ATSSVKRHPQLLREAVAVFEAVDDKYELARTLRDLGRAQRAL-GE
NKLARRVIRRGWHVARMC-E---AAPLCEELM----------------------------
---------------PTADG------------------------LVPAQPASAARRSDLD
RLTSSEHRVAALAASGLTNREIAVKLYVTHSTVEQHLTRVFRKLGIKQREQLPPELSVDR
SK--------------------------
>NC_013093.1|c5|3867406-3870132|-|YP_003101049.1|transcriptional_regulator,_LuxR_family
------------------------------------------------------------
------------------MELLRAPE--------IQSAVEHLAVDLPD-------R-AGR
AFLVDGPPACGKTTALRRLVDRIAHE----------------------------------
----------DHLVLTATCTPPETELPFGVLKQLLASP-GMARVDPRLVADLGELLAPAP
PPADDSA------------------------------------------------LLQLY
HSLCAALIA-----LS--E-EVPLVI-----------------------AVDDVRHGDTA
SLHVLLQLVH-RLDTARVRL--LLT--------DDL-LLPVSFPPL---RYELLRLRGL-
GLV--RVAPLPAARVRE-EA----------VRAVGADVAKR-----VDFAALTGGNPLLL
HALAVDV-----------------------LEAGEPREIG------------------YG
NSFLSCLHRNE-PLFLD----TVRALAVL------GGG-SASD-----LGRLSGHEPEQV
AQVLNALRESGLL---------AED-GF--RHDAARRAVV---ADTPVAEHEVLHRRAAR
LLRDQ-GGAVTDIADHLLRA--GR------ITDPWAADLLVDAAELVVQRG-EPTA----
-----AVALLQRALDCSPD------RERRT------------------------------
---------------AVQARLATAEWLVNPSTSARH-HTALLAAFHAG--RLSVRDSATL
M-KHLRWAG--NTA----DSDAVLARLRTDPR-----------AAEDVPVLEHWLTSTYP
G--------------------------------------------------------AAR
PRTVLGRDVDSARSRADLVPRANAVLLDVLVA-------------------------GDS
DDVADRAEAVLRELR-----LARESGCYGGAAVLALSALLYSDRADVAASWCEQLLSA-R
AVP-LLPMPRAQVL-ALAAESALRRGDHPSADELAREALTVVSPTAWG--VS-VGLPLST
RVLALTRMGRYDEAAAVV-AQP--VPNGMFGHRNSVD--YLYARGHF-FLARERPRAALG
DFLLCGEQLTRWGLGSGCA------PVPWRTAAAEAWLAQGNRDQARVLIHEQLGR-PGT
DSRRARGQALRLLA-ATSSVKRHPQLLREAVAVFEAVDDKYELARTLRDLGRAQRAL-GE
NKLARRVIRRGWHVARMC-E---AAPLCEELM----------------------------
---------------PTADG------------------------LVPAQPASAARRSDLD
RLTSSEHRVAALAASGLTNREIAVKLYVTHSTVEQHLTRVFRKLGIKQREQLPPELSVDR
SK--------------------------
>NZ_GG753626.1|c7|4888651-4891404|-|ZP_06710497.1|LuxR-family_transcriptional_regulator
------------------------------------------------------------
------------------MNLVERDE--------QESELERIWSECGA-------G-KGS
VVLLEGSGGSGKTELLHQAAERARRG----------------------------------
----------GGLVLHAGCSPAESALPFGVLGQLFSSV-PAVEGPLARLQAPNSPLAAEA
APHDPAR-------------------------------GA---------VAIGPQLALLL
NEVTATLLE-----LS--A-ANPVFI-----------------------GVDTVRHADAQ
SLACLLYLVR-RTGAARVMA--VLT--------DDT---AAHRSPF---RTELLDQPHT-
RRV--PLAPLAEAEITA-LL----------ARQLERDEAER---LAGEFHTLSGGNLLLL
RALLEDH-----------------------LACGGVRKDG------------------YG
RAVLRQLGRLE-EPVTA----VARALAVL------GSA-EAPDR----LARLAGVDDGAV
ETALRTLGSVGLV---------AGL-TF--RHDIVRQAVL---DDLAPEDRTTLRLAAAA
LLHEQ-GCPPRAIAPLLIEA--DR------PDGAWSVRVLSEAAEQELLAG-RPQH----
-----AVAALEAALRAPVG--S---GAERA------------------------------
---------------AIESRLIQVRRLFDPATAERH-LTALTTAARAG--ELAPARTLDL
V-RQLLWQG--RTA----EAGELLDRLRTARPEAHSE------AAALLEDTEKWLAWTHP
------------------------------------------------------TLARRT
PRPTGQG-------------RPAALLADALVN-------------------------GRA
HEAVGQAHQVLKDRG-----PSYDLSWPEEPALLALGVLLCTDSPD-AAAWCDRLLRE-G
HTP-YSPTWMAMLS-AMRSEAALRLGDLTGAADHAQQALNHIHPAAWG--VA-VGGPLGS
LVLATTRMGHYDEAGAYL-THA--VPKHMFDTRYGLH--YLHARGQY-HLLTGHPHAALA
DFLACGDRMRAWGIDVP-G------VVPWRTSAAEAWLALGNREQAARLSYDQLGR-PGT
NGARPRAAALRTLA-VGGPVARRPQMLSEALDLYERCGDRYEQIRVLGDLATTYHEL-GD
NRRARTHVRRARHLVGMC-G---AASLSEELF----------------------------
-------------SFPDD--------------------------AEEQPSPAGAGFGDGA
LLTGSERRVAALAVSGYTNREIAAKLFITPSTVEQHLTRVYRKLGVRCRKDLPVELATSV
TEAVAGQGA-------------------
>NZ_ACEW01000646.1|c1|2774-5527|+|ZP_05511725.1|LuxR_family_transcriptional_regulator
------------------------------------------------------------
----------------------------------MCAQLEGALTACAS-------G-AAG
VVLLEGAVGCGKTEMLLHVAERAERL----------------------------------
----------GALVLRAAGSAQERDVPHGVLHQLTAGL-PAD--------TLPDGAAGRE
PLGG--------------------------------------------------------
REFIAALRT-----AA--G-RTPVVV-----------------------CVDDLHHTDPA
SLDRLLDVAR-AVRGERLLL--VLA--------DAP-HEHAESPLA---RTEFLRHPGF-
TRI--LLGRLDEPGTAA-LL----------EDHTGRPATEA---DTAWLHGATGGNPLLL
RALLSER-----PRA----------------VRGPADRWPEPA------PGGP-----FT
QAALTCLHRDG-ADSRT----LAVALAVL------GDD-ATPEL----TARLAGTGPTTA
ARAAAALEASGLT---------EDG-RL--RHPAVAAAVL---DGVPRHELAVLRTRAAR
VLHEA-GARAGTVAPHLLAASEAGAGPEEAPRGDWPVQVLREAALQALVDDERCDH----
-----AAACLELAYTLCAD------EQTGR------------------------------
---------------EIGLQLAAVTWRKHPAAAERH-LDDPLAALRRG--DLGPAQAGRL
A-RLLVAQG--RIE----DAAEALERMADPRAAARTT------REDPLRELFALPPAAAP
AG-------------------------------------------------------PAA
PAAAPGAPAEHPGAPARTGTAELRSSAALWTH-------------------------PDS
AGDEQAAERLLKGTP-----LAHAT---FDPIVQAVRTLVHADRPDRAVVWCRRLQAE-T
QSA-ASPGWQSVFG-LVHSEALLRLGDLAGAEREASAAVDAVADRGG---LF-LFGPLAT
LVTALTAMGRYEAVARRL-QTP--VPEELFSSVYALN--YLRARGHY-YLATHRHRAALG
EFLDAGRLAQRWGLDRP-R------QLPWRTDAAEALLRLGEHRQAERFVVEQLAT-SGV
RSPRVLGVSLRLRA-ATSELRQRPKLLTRAVDELSRSGDRLELAKALADLGRALLLL-GE
GTRAGMVTRRAWHLAADC-G---AAPLCAQIM----------------------------
---------------PGQTGTE----------------------QRTAPERPAEETPETE
QLSESERRVAALAAYGYTNREISAKLYVTVSTVEQHLTRAYRKLGISRRQDLPMSLQFDS
LESAFPGVGVA-----------------
>AB449340.1|c1|8611-11334|+|BAG85023.1|putative_transcriptional_regulator
------------------------------------------------------------
------------------MESVEQQT--------EWRTLHTAFDDAAS-------G-ISR
TVLIEAGVACGKSTVLEGIGDYTAAR----------------------------------
----------GALVLHAVGSLSGSGTPLGVVRQLVEYP-----------SFPATAGQNLL
ADVERGD----------------------------------------------------Y
AQFSAALRN-----IA--V-RLPVVV-----------------------SVDDLHHVDAA
SLHCLLHLVG-HTRRSRILT--LFT--------QSL-SCAPQDPTF---DTELLRQPNF-
RRV--RLAPLDLHGVTA-ML----------ANHPEVDAGED---LTRELHSVSGGNPLLL
RALIEDH-----LAA--------------RRFAGPSGERAEPG------VA-------FS
RAVLTCLHRGG-SRMRD----AATALAVL------GES-EHTAL----LGPLAGLSAAAL
AQARHALDATGIT---------AEH-RF--RHRLARAAVL---DSITPADRRALHLKAAT
LLHRH-GASVREVAAHLLAG--GG------TPDAWGVTALKEAAEEALAAD-RAQE----
-----AVAFLELAHAGSTD------ARTRA------------------------------
---------------EITVRLACVMWRLNPATAESLYLAESLSALWSG--LLPVPFIAPL
A-NLLVAHG--RLD----EARHVLGRLQESTGPGQA-------LPADTEIMHPWEW----
----------------------------------------------------------DV
HFPHALAPATPATSGRDIRLLSSHGG-------------------------------RPD
PVHATGIERFLRVSP-----LTDTT---LTAVTTAIKSLIHHDRVDLAESWCDAFLQE-A
ERR-DAPGWEVLFA-SLRAEIALHQGRLTDAEQYADRALAAVPEHTGV--FF-IGGPLSS
LVLAYTAMGDYESAARRL-NQS--VPEALFKNVYGLR--YLRARGRY-YLATNRAHTALG
DFLDAGRLAARWGVDRP-T------LLPWRSDAAEAWLELGNPEQAERLITDQLQM-RDA
INSRVRGISLRLRA-MTADAKVRPRLLTKAVEALQTSGDRLEMARVLDALGDAQQAL-GD
TTRAAAAKRRARHMAREC-G---ATAWGGAPQ----------------------------
---------------STASRSVPA--------------------SRRHWSAEGHAPSALT
KLSESEKRVAALAACGYTNRDISAKLYITVSTVEQHLTRVYRKLHISRREQLPPDLQFSP
YENDCQSIAT------------------
>FM173265.1|c1|13216-15954|+|CAQ64683.1|LuxR-family_transcriptional_regulator
------------------------------------------------------------
-------------MPFSVMESVEQQT--------EWRTLHTAFDDAAS-------G-ISR
TVLIEAGVACGKSTVLEGIGDYTAAR----------------------------------
----------GALVLHAVGSLSGSGTPLGVVRQLVEYP-----------SFPATAGQNLL
ADVERGD----------------------------------------------------Y
AQFSAALRN-----IA--V-RLPVVV-----------------------SVDDLHHVDAA
SLHCLLHLVG-HTRRSRILT--LFT--------QSL-SCAPQDPTF---DTELLRQPNF-
RRV--RLAPLDLHGVTA-ML----------ANHPEVDAGED---LTRELHSVSGGNPLLL
RALIEDH-----LAA--------------RRFAGPSGERAEPG------VA-------FS
RAVLTCLHRGG-SRMRD----AATALAVL------GES-EHTAL----LGPLAGLSAAAL
AQARHALDATGIT---------AEH-RF--RHRLARAAVL---DSITPADRRALHLKAAT
LLHRH-GASVREVAAHLLAG--GG------TPDAWGVTALKEAAEEALAAD-RAQE----
-----AVAFLELAHAGSTD------ARTRA------------------------------
---------------EITVRLACVMWRLNPATAESLYLAESLSALWSG--LLPVPFIAPL
A-NLLVAHG--RLD----EARHVLGRLQESTGPGQA-------LPADTEIMHPWEW----
----------------------------------------------------------DV
HFPHALAPATPATSGRDIRLLSSHGG-------------------------------RPD
PVHATGIERFLRVSP-----LTDTT---LTAVTTAIKSLIHHDRVDLAESWCDAFLQE-A
ERR-DAPGWEVLFA-SLRAEIALHQGRLTDAEQYADRALAAVPEHTGV--FF-IGGPLSS
LVLAYTAMGDYESAARRL-NQS--VPEALFKNVYGLR--YLRARGRY-YLATNRAHTALG
DFLDAGRLAARWGVDRP-T------LLPWRSDAAEAWLELGNPEQAERLITDQLQM-RDA
INSRVRGISLRLRA-MTADAKVRPRLLTKAVEALQTSGDRLEMARVLDALGDAQQAL-GD
TTRAAAAKRRARHMAREC-G---ATAWGGAPQ----------------------------
---------------STASRSVPA--------------------SRRHWSAEGHAPSALT
KLSESEKRVAALAACGYTNRDISAKLYITVSTVEQHLTRVYRKLHISRREQLPPDLQFSP
YENDCQSIAT------------------
>NZ_ACEX01000522.1|c1|47885-48055|-|ZP_05517734.1|LuxR_family_transcriptional_regulator
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
--------MAALAASGYTNREIAAKLYITISTVEQHLTRVYRKINISQRRDLPASLDFDV
AHTA------------------------
>AY899214.1|c1|150769-153765|-|AAX98205.1|transcriptional_regulator
------------------------------------------------------------
------------MGKAFAAVLVERDEQIGRLTSFVSGTASGAVAAAAA-------G-TGR
IAVIDGPVASGKTALLHRVLELTAGA----------------------------------
----------GPRVITAVTSPAEQSMPFGVVEQLVRDAQAVSDRLPLHPSAGPDAALDST
PRPESEP-----------------------------------------------VPAEIL
MAFHLQLAE-----VC--A-RGPVLI-----------------------VVDDVQYADPQ
SLYCLAHMLL-RASASGAVVSLLVS--------RGP-DVGGTPPVV---LEELLYQLRG-
LHV--RLGPLSVDGVGR-LLAARDPEAGARKPAAPASWSTP---LAASVHAATGGNPLLV
HGLIEDRLSRQRLLA----AGPGAGPASAEAGNGTGNETEDAL------AGTPHAGDQFL
QSALICVHRTG-SDGLR----VAQGIALL------GGA-GSTSL----LARLVEVEEWTV
EQVVTALNEAGVL---------EKS-VF--RHGGVQTAVV---ESLTDEAATRLRQRAAV
LLYED-GAAPLTIAAQLLSHEMSA------PDEEWVPRVLSEAARAALCTQ-QVEF----
-----AVRCLRMAESCCRD------ETERM------------------------------
---------------LLRAHLAKYIWRVQPSAWPQQ-LRPLLGAVRDG--LLPPVDTVRL
V-YDLLWNG--WMD----DAAAAIRQVVDVLHRSPDAR-----LATELGALRLALASTYP
AV----------------------------------------------------LEHLGD
VPAPARGAGERLSAQEEILLTSARVLHGVLRGGDGARDTDPD---------------TDA
EDFAESAERTLAGTR-----LTEET---HLGLRACLLTLFYADRPATATLWADRLLVE-A
ADR-KAPGWTAVLR-AIRAHMSLRRGHLVEARRLAEQALDQLPPHGWG--VG-IGMPLSA
LIEARTAMGDHEAAAELL-DRP--VPEDMLTTRHGLH--YLYARGRH-QLATGRHHAALT
DFTACGELMRRWGMDRS-T------LVPWRVGVAEARLALGSREEAERFAREQL---AGD
AGQRVRGHALRVLA-AARPLRERPALLAQAVALLQEDSDWYELARALTDLGQAYKQL-GD
PSQGKVHTRRAWRIAKGC-G---ARELYRSLH----------------------------
---------------PSQPPAPSAPAAQPR--------------PAAPADAARPPSAAVS
SLTDAERKVAALAAHGYTNREIGAKLFITVSTVEQHLTRVYRKINITHRQDLPVSLDTDV
AHTA------------------------
