bin/ABYSS
bin/ABYSS-P
bin/AdjList
bin/Consensus
bin/DAssembler
bin/DistanceEst
bin/DistanceEst-ssq
bin/KAligner
bin/MergeContigs
bin/MergePaths
bin/Overlap
bin/ParseAligns
bin/PathConsensus
bin/PathOverlap
bin/PopBubbles
bin/SimpleGraph
bin/abyss-align
bin/abyss-bloom
bin/abyss-bloom-dbg
bin/abyss-bloom-dist.mk
bin/abyss-bloom-dist.mk.Makefile
bin/abyss-bowtie
bin/abyss-bowtie2
bin/abyss-bwa
bin/abyss-bwamem
bin/abyss-bwasw
bin/abyss-db-txt
bin/abyss-dida
bin/abyss-fac
bin/abyss-fatoagp
bin/abyss-filtergraph
bin/abyss-fixmate
bin/abyss-fixmate-ssq
bin/abyss-gapfill
bin/abyss-gc
bin/abyss-index
bin/abyss-junction
bin/abyss-kaligner
bin/abyss-layout
bin/abyss-longseqdist
bin/abyss-map
bin/abyss-map-ssq
bin/abyss-mergepairs
bin/abyss-overlap
bin/abyss-paired-dbg
bin/abyss-paired-dbg-mpi
bin/abyss-pe
bin/abyss-pe.Makefile
bin/abyss-rresolver-short
bin/abyss-samtoafg
bin/abyss-scaffold
bin/abyss-sealer
bin/abyss-stack-size
bin/abyss-tabtomd
bin/abyss-todot
bin/abyss-tofastq
bin/konnector
bin/logcounter
share/doc/abyss/CITATION.bib
share/doc/abyss/CITATION.md
share/doc/abyss/COPYRIGHT
share/doc/abyss/ChangeLog
share/doc/abyss/LICENSE
share/doc/abyss/README.md
share/doc/abyss/flowchart.pdf
share/doc/abyss/flowchart_simplified.pdf
