[console_scripts]
fugassem = fugassem.fugassem:main
fugassem_abundance_RPK = fugassem.tools.abundance_RPK:main
fugassem_abundance_normalization = fugassem.tools.abundance_normalization:main
fugassem_abundance_smoothing = fugassem.tools.abundance_smoothing:main
fugassem_build_union_terms = fugassem.preprocess.build_union_terms:main
fugassem_calculate_correlation = fugassem.preprocess.calculate_correlation:main
fugassem_collect_features = fugassem.preprocess.collect_features:main
fugassem_collect_ml_results = fugassem.predict.collect_ml_results:main
fugassem_collect_seqSimilarity_results = fugassem.tools.collect_seqSimilarity_results:main
fugassem_convert_DDI = fugassem.preprocess.convert_DDI:main
fugassem_convert_coann = fugassem.preprocess.convert_coann:main
fugassem_extract_feature_subset = fugassem.common.extract_feature_subset:main
fugassem_format_function = fugassem.common.format_function:main
fugassem_gene_abundance = fugassem.tools.gene_abundance:main
fugassem_gene_abundance_indexRef = fugassem.tools.gene_abundance_indexRef:main
fugassem_gene_catalog_abundance = fugassem.tools.gene_catalog_abundance:main
fugassem_geneontology = fugassem.common.geneontology:main
fugassem_generate_annotation_input = fugassem.tools.generate_annotation_input:main
fugassem_generate_stratified_mtx_input = fugassem.tools.generate_stratified_mtx_input:main
fugassem_impute_nan = fugassem.preprocess.impute_nan:main
fugassem_machine_learning = fugassem.predict.machine_learning:main
fugassem_merged_prediction = fugassem.predict.merged_prediction:main
fugassem_performance_vis = fugassem.tools.performance_vis:main
fugassem_predict_function = fugassem.predict.predict_function:main
fugassem_prepare_annotation = fugassem.tools.prepare_annotation:main
fugassem_prepare_coann_pairs = fugassem.tools.prepare_coann_pairs:main
fugassem_prepare_contig = fugassem.tools.prepare_contig:main
fugassem_prepare_nextlayer_ml = fugassem.predict.prepare_nextlayer_ml:main
fugassem_prepare_seqSimilarity = fugassem.tools.prepare_seqSimilarity:main
fugassem_process = fugassem.tasks.fugassem_process:main
fugassem_refine_abunds = fugassem.preprocess.refine_abunds:main
fugassem_refine_anns = fugassem.preprocess.refine_anns:main
fugassem_select_feature = fugassem.predict.select_feature:main
fugassem_split_taxa = fugassem.preprocess.split_taxa:main
fugassem_stratified_abundance = fugassem.tools.stratified_abundance:main
fugassem_sum_to_family_abundance = fugassem.tools.sum_to_family_abundance:main
fugassem_transpose = fugassem.common.transpose:main

